BLASTX nr result

ID: Bupleurum21_contig00017856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017856
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]       175   4e-42
ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002272274.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   164   9e-39
gb|ACM46018.1| R2R3 transcription factor MYB108-like protein 2 [...   164   9e-39

>emb|CCA29096.1| putative MYB transcription factor [Rosa rugosa]
          Length = 343

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/103 (78%), Positives = 86/103 (83%)
 Frame = +3

Query: 66  EENEEEMMMDLRRGPWTVEEDFALMNYISLHGEGRWNALACSAGLKRTGKSCRLRWLNYL 245
           EE+E+ MMMDLRRGPWTVEED ALMNYI+ HGEGRWN+LA  AGLKRTGKSCRLRWLNYL
Sbjct: 17  EEDEDAMMMDLRRGPWTVEEDLALMNYIANHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 76

Query: 246 RPDVKRGNXXXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 374
           RPDV+RGN            HSRWGNRWSKIAQHLPGRTDNEI
Sbjct: 77  RPDVRRGNITLEEQLLILELHSRWGNRWSKIAQHLPGRTDNEI 119


>ref|XP_002311369.1| predicted protein [Populus trichocarpa] gi|222851189|gb|EEE88736.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  171 bits (432), Expect = 7e-41
 Identities = 78/102 (76%), Positives = 85/102 (83%)
 Frame = +3

Query: 69  ENEEEMMMDLRRGPWTVEEDFALMNYISLHGEGRWNALACSAGLKRTGKSCRLRWLNYLR 248
           +++EEMM DLRRGPWTVEEDF L+NYI+ HGEGRWN+LA  AGLKRTGKSCRLRWLNYLR
Sbjct: 18  QSDEEMMGDLRRGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLR 77

Query: 249 PDVKRGNXXXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 374
           PDV+RGN            HSRWGNRWSKIAQHLPGRTDNEI
Sbjct: 78  PDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEI 119


>ref|XP_002316060.1| predicted protein [Populus trichocarpa] gi|222865100|gb|EEF02231.1|
           predicted protein [Populus trichocarpa]
          Length = 316

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/102 (75%), Positives = 86/102 (84%)
 Frame = +3

Query: 69  ENEEEMMMDLRRGPWTVEEDFALMNYISLHGEGRWNALACSAGLKRTGKSCRLRWLNYLR 248
           +++EEMM+DLRRGPWTVEEDF L++YI+ HGEGRWN+LA  AGLKRTGKSCRLRWLNYLR
Sbjct: 15  QSDEEMMVDLRRGPWTVEEDFKLIDYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYLR 74

Query: 249 PDVKRGNXXXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 374
           PDV+RGN            HSRWGNRWSKIAQHLPGRTDNEI
Sbjct: 75  PDVRRGNITLEEQLMILELHSRWGNRWSKIAQHLPGRTDNEI 116


>ref|XP_002272274.2| PREDICTED: LOW QUALITY PROTEIN: transcription repressor MYB5 [Vitis
           vinifera]
          Length = 286

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/105 (72%), Positives = 85/105 (80%)
 Frame = +3

Query: 60  KGEENEEEMMMDLRRGPWTVEEDFALMNYISLHGEGRWNALACSAGLKRTGKSCRLRWLN 239
           +G ++EEEM MDLR+GPWT EED  L NYI++HGEGRWN+LA  AGLKRTGKSCRLRWLN
Sbjct: 6   RGCDSEEEMNMDLRKGPWTAEEDTLLNNYITIHGEGRWNSLARCAGLKRTGKSCRLRWLN 65

Query: 240 YLRPDVKRGNXXXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 374
           YLRP+VKRGN            HSR+GNRWSKIAQHLPGRTDNEI
Sbjct: 66  YLRPNVKRGNITLQEQLLILELHSRYGNRWSKIAQHLPGRTDNEI 110


>gb|ACM46018.1| R2R3 transcription factor MYB108-like protein 2 [Vitis vinifera]
          Length = 286

 Score =  164 bits (414), Expect = 9e-39
 Identities = 76/105 (72%), Positives = 85/105 (80%)
 Frame = +3

Query: 60  KGEENEEEMMMDLRRGPWTVEEDFALMNYISLHGEGRWNALACSAGLKRTGKSCRLRWLN 239
           +G ++EEEM MDLR+GPWT EED  L NYI++HGEGRWN+LA  AGLKRTGKSCRLRWLN
Sbjct: 6   RGCDSEEEMNMDLRKGPWTAEEDTLLNNYITIHGEGRWNSLARCAGLKRTGKSCRLRWLN 65

Query: 240 YLRPDVKRGNXXXXXXXXXXXXHSRWGNRWSKIAQHLPGRTDNEI 374
           YLRP+VKRGN            HSR+GNRWSKIAQHLPGRTDNEI
Sbjct: 66  YLRPNVKRGNITLQEQLLILELHSRYGNRWSKIAQHLPGRTDNEI 110


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