BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017839
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526718.1| nucleic acid binding protein, putative [Rici...    88   6e-25
gb|ADE74631.1| unknown [Vitis vinifera]                                89   2e-24
ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [...    88   2e-24
ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containin...    87   5e-24
ref|XP_002526717.1| nucleic acid binding protein, putative [Rici...    84   5e-23

>ref|XP_002526718.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533907|gb|EEF35632.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 728

 Score = 88.2 bits (217), Expect(3) = 6e-25
 Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = -3

Query: 364 NKDLKYLTVQIGDTDVSLHELATNNDVNGFKRLIYRDS--IDAIGL*YGRQKDSRHMVLE 191
           N D+ +LTV+  DT  SL ELA NND+ GFKR I RD   +D IGL YGR+K S+ MV E
Sbjct: 28  NIDMNHLTVETEDTFASLLELAANNDIEGFKRTIERDPSCVDEIGLWYGRRKGSKQMVNE 87

Query: 190 NRTPLMVAATYWSIDV 143
           +RTPLMVAATY SIDV
Sbjct: 88  HRTPLMVAATYGSIDV 103



 Score = 48.1 bits (113), Expect(3) = 6e-25
 Identities = 21/34 (61%), Positives = 27/34 (79%)
 Frame = -2

Query: 107 DKTTALHCASSSGCLKAINDVKLLLFAGADPNMV 6
           DK+TALHC +S G + A++ VKLLL AGADPN +
Sbjct: 122 DKSTALHCVASGGAVNAVDVVKLLLAAGADPNSI 155



 Score = 22.7 bits (47), Expect(3) = 6e-25
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -1

Query: 141 SDVNQSCGLD 112
           +DVN+SCGLD
Sbjct: 113 ADVNRSCGLD 122


>gb|ADE74631.1| unknown [Vitis vinifera]
          Length = 740

 Score = 89.0 bits (219), Expect(2) = 2e-24
 Identities = 45/74 (60%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
 Frame = -3

Query: 358 DLKYLTVQIGDTDVSLHELATNNDVNGFKRLIYRDS--IDAIGL*YGRQKDSRHMVLENR 185
           D+ +LTV+  D+  SLHELA NNDV+GFKR + RD+  I+ +GL YGRQK S+ MVLE+R
Sbjct: 27  DMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWYGRQKGSKQMVLEHR 86

Query: 184 TPLMVAATYWSIDV 143
           TP+MVAATY S++V
Sbjct: 87  TPMMVAATYGSVEV 100



 Score = 48.5 bits (114), Expect(2) = 2e-24
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -2

Query: 107 DKTTALHCASSSGCLKAINDVKLLLFAGADPN 12
           DK+TALHCA+S G + A++ VKLLL AGADPN
Sbjct: 119 DKSTALHCAASGGSVNAVDVVKLLLSAGADPN 150


>ref|XP_003625157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
           gi|124360202|gb|ABN08215.1| Zinc finger, CCCH-type
           [Medicago truncatula] gi|355500172|gb|AES81375.1| Zinc
           finger CCCH domain-containing protein [Medicago
           truncatula]
          Length = 734

 Score = 88.2 bits (217), Expect(2) = 2e-24
 Identities = 48/83 (57%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
 Frame = -3

Query: 379 HTQLYNKDLKYLTVQIGDTDVSLHELATNNDVNGFKRLIYRD--SIDAIGL*YGRQKDSR 206
           ++QL N  + +LT+   D+  SL ELA NNDV GFKRLI  D  S+D +GL YGR+K S+
Sbjct: 25  NSQLRNHTMNHLTISTEDSFASLLELAANNDVEGFKRLIEYDPMSVDEVGLWYGRRKGSK 84

Query: 205 HMVLENRTPLMVAATYWSIDVKR 137
            MV E RTPLMVAATY SIDV +
Sbjct: 85  QMVNEQRTPLMVAATYGSIDVMK 107



 Score = 48.9 bits (115), Expect(2) = 2e-24
 Identities = 23/34 (67%), Positives = 27/34 (79%)
 Frame = -2

Query: 107 DKTTALHCASSSGCLKAINDVKLLLFAGADPNMV 6
           DK+TALHCA+S G   A++ VKLLL AGADPN V
Sbjct: 124 DKSTALHCAASGGAENAVDAVKLLLAAGADPNSV 157


>ref|XP_002279202.2| PREDICTED: zinc finger CCCH domain-containing protein 30 [Vitis
           vinifera]
          Length = 740

 Score = 87.4 bits (215), Expect(2) = 5e-24
 Identities = 44/74 (59%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
 Frame = -3

Query: 358 DLKYLTVQIGDTDVSLHELATNNDVNGFKRLIYRDS--IDAIGL*YGRQKDSRHMVLENR 185
           D+ +LTV+  D+  SLHELA NNDV+GFKR + RD+  I+ +GL YGRQK S+ MVL++R
Sbjct: 27  DMNHLTVETEDSFSSLHELAANNDVDGFKRSLERDASAINEVGLWYGRQKGSKQMVLKHR 86

Query: 184 TPLMVAATYWSIDV 143
           TP+MVAATY S++V
Sbjct: 87  TPMMVAATYGSVEV 100



 Score = 48.5 bits (114), Expect(2) = 5e-24
 Identities = 22/32 (68%), Positives = 27/32 (84%)
 Frame = -2

Query: 107 DKTTALHCASSSGCLKAINDVKLLLFAGADPN 12
           DK+TALHCA+S G + A++ VKLLL AGADPN
Sbjct: 119 DKSTALHCAASGGSVNAVDVVKLLLSAGADPN 150


>ref|XP_002526717.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223533906|gb|EEF35631.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 725

 Score = 84.3 bits (207), Expect(3) = 5e-23
 Identities = 46/74 (62%), Positives = 54/74 (72%), Gaps = 2/74 (2%)
 Frame = -3

Query: 358 DLKYLTVQIGDTDVSLHELATNNDVNGFKRLIYRDS--IDAIGL*YGRQKDSRHMVLENR 185
           D+ +LTV+  DT  SL ELA NNDV GFKR I R+   +D +GL YGR+K S+ MV E R
Sbjct: 30  DMNHLTVETADTFASLLELAANNDVEGFKRSIKREPSCVDEVGLWYGRKKGSKQMVNELR 89

Query: 184 TPLMVAATYWSIDV 143
           TPLMVAATY SIDV
Sbjct: 90  TPLMVAATYGSIDV 103



 Score = 45.1 bits (105), Expect(3) = 5e-23
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = -2

Query: 107 DKTTALHCASSSGCLKAINDVKLLLFAGADPNM 9
           D +TALHCA+S G + A + VKLLL AGADPN+
Sbjct: 122 DNSTALHCAASGGAVNAGDVVKLLLAAGADPNL 154



 Score = 23.1 bits (48), Expect(3) = 5e-23
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = -1

Query: 141 SDVNQSCGLDN 109
           +DVN+ CGLDN
Sbjct: 113 ADVNRPCGLDN 123