BLASTX nr result

ID: Bupleurum21_contig00017802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017802
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515310.1| conserved hypothetical protein [Ricinus comm...   212   2e-69
ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257...   211   7e-68
gb|ABK93302.1| unknown [Populus trichocarpa]                          203   5e-66
ref|XP_002320982.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-65
emb|CAN74686.1| hypothetical protein VITISV_020416 [Vitis vinifera]   191   1e-61

>ref|XP_002515310.1| conserved hypothetical protein [Ricinus communis]
           gi|223545790|gb|EEF47294.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  212 bits (539), Expect(2) = 2e-69
 Identities = 121/203 (59%), Positives = 142/203 (69%), Gaps = 16/203 (7%)
 Frame = +3

Query: 297 QTLMDFPARSENMCYSRDEMPLQYSPMSEDSDDCPYC-VSPINTSSSQPESVPTSPVSPY 473
           + LM+ PARS++M Y  DEM LQYSPMSEDSDD  +C   PINT SSQP+S+PTSPVSPY
Sbjct: 64  ENLMESPARSDSMFYVWDEMSLQYSPMSEDSDDSRFCETGPINTCSSQPDSLPTSPVSPY 123

Query: 474 RYQRVSSG---APPITSYPLPGSNLP-VTCLQR----SDSEGRFPSSPSDICHSADLRRA 629
           RYQR   G   AP  +SYP  G  +  V C Q     SDSEGRFPSSPSDICHSADLRRA
Sbjct: 124 RYQRSFGGFSSAPSTSSYPAHGCTVSSVACSQPRQRGSDSEGRFPSSPSDICHSADLRRA 183

Query: 630 ALMRSVQMRTQSPGPSIFEMSFSPGQ------ETEQQPCCYMKSLVDEREDHVVD-TCLT 788
           AL+RSVQMRTQ PG S FE+ F  GQ      E E++PC YMKSLVDER+  + + + + 
Sbjct: 184 ALLRSVQMRTQPPGSSSFELPFGSGQEPASNIEAEERPCSYMKSLVDERDYQIEEQSSMG 243

Query: 789 SAVSELETGEKPCRVLNMNLKVD 857
           S+  E   G K CRVLNMN++ D
Sbjct: 244 SSEPEFNDG-KSCRVLNMNIEGD 265



 Score = 78.2 bits (191), Expect(2) = 2e-69
 Identities = 35/42 (83%), Positives = 40/42 (95%)
 Frame = +2

Query: 176 GKRNRDPEDDVYVDNLNSHKRYLSEIMPSSLNGLTVGDSLPD 301
           GKRNRDPED+VY+DNL+SHKRYLSEIM SSLNGLTVGD +P+
Sbjct: 23  GKRNRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPIPE 64


>ref|XP_002275125.1| PREDICTED: uncharacterized protein LOC100257226 [Vitis vinifera]
           gi|297743955|emb|CBI36925.3| unnamed protein product
           [Vitis vinifera]
          Length = 257

 Score =  211 bits (538), Expect(2) = 7e-68
 Identities = 123/206 (59%), Positives = 143/206 (69%), Gaps = 14/206 (6%)
 Frame = +3

Query: 294 YQTLMDFPARSENMCYSRDEMPLQYSPMSEDSDDCPYCVSPINTSSSQPESVPTSPVSPY 473
           ++ LM+ PARSE M Y RD+M LQYSPMSEDSDD  YC  PIN SSSQ +S+PTSPVSP+
Sbjct: 58  HENLMESPARSETMFYLRDDMSLQYSPMSEDSDDNRYCEIPINISSSQTDSLPTSPVSPH 117

Query: 474 RYQRVSSG--APPITSYPLPGSNLP-VTCLQR----SDSEGRFPSSPSDICHSADLRRAA 632
           RYQR  S   +   T+ P  G  L  V C Q     SDSEGRFPSSPSDICHSADLRRAA
Sbjct: 118 RYQRPFSALSSSGTTACPSHGCTLAAVACAQPRQRGSDSEGRFPSSPSDICHSADLRRAA 177

Query: 633 LMRSVQMRTQSPGPSIFEMSFSPGQ------ETEQQPCCYMKSLVDEREDHVVDTCLTSA 794
           L+RSVQMR Q PGPS+FE+ FS GQ      ETE++PC     LVDER D+ ++ C +  
Sbjct: 178 LLRSVQMRAQPPGPSVFELPFSAGQEAVRNMETEERPC-----LVDER-DYRIEECSSMG 231

Query: 795 VSELE-TGEKPCRVLNMNLKVDEAAD 869
           +SE E   EK CRVLNMNLK +E  D
Sbjct: 232 ISEHEFNREKSCRVLNMNLKGEEPGD 257



 Score = 73.6 bits (179), Expect(2) = 7e-68
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +2

Query: 176 GKRNRDPEDDVYVDNLNSHKRYLSEIMPSSLNGLTVGDSL 295
           GKR+RDPED+VY+DNL+SHKRYLSEIM SSLNGLTVGD L
Sbjct: 18  GKRSRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPL 57


>gb|ABK93302.1| unknown [Populus trichocarpa]
          Length = 271

 Score =  203 bits (517), Expect(2) = 5e-66
 Identities = 114/199 (57%), Positives = 142/199 (71%), Gaps = 12/199 (6%)
 Frame = +3

Query: 303 LMDFPARSENMCYSRDEMPLQYSPMSEDSDDCPYCVSPINTSSSQPESVPTSPVSPYRYQ 482
           LM+ PARS+ M ++RDEM LQYSPMSED DD  +C +PIN  S Q ES+P SPVSPYRYQ
Sbjct: 72  LMESPARSDTMFFARDEMSLQYSPMSEDFDDSRFCETPINACSPQSESLPGSPVSPYRYQ 131

Query: 483 RVSSG---APPITSYPLPGSNLPVTCLQR--SDSEGRFPSSPSDICHSADLRRAALMRSV 647
           R   G   AP  +S+   G ++  +  ++  SDSEGRFPSSPSDICHSADLRRAAL+RSV
Sbjct: 132 RPLCGFSSAPYSSSFSSHGCSVTSSQPRQRGSDSEGRFPSSPSDICHSADLRRAALLRSV 191

Query: 648 QMRTQSPGPSIFEMSFSPG------QETEQQPCCYMKSLVDEREDHVVDTCLTSAVSELE 809
           QMRTQ  G S FE+ FS G       E E++PC YMKSLV+ERE + ++ C + ++SE E
Sbjct: 192 QMRTQPTGSSSFELPFSSGHEPGSNMEAEERPCSYMKSLVEERE-YPLEECSSMSISEPE 250

Query: 810 -TGEKPCRVLNMNLKVDEA 863
              EK CRVLNMN+K D++
Sbjct: 251 FNEEKACRVLNMNIKGDDS 269



 Score = 75.5 bits (184), Expect(2) = 5e-66
 Identities = 35/42 (83%), Positives = 39/42 (92%)
 Frame = +2

Query: 176 GKRNRDPEDDVYVDNLNSHKRYLSEIMPSSLNGLTVGDSLPD 301
           GKR+RDPED+VY+DNL+SHKRYLSEIM SSLNGLTVGD L D
Sbjct: 29  GKRSRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPLQD 70


>ref|XP_002320982.1| predicted protein [Populus trichocarpa] gi|222861755|gb|EEE99297.1|
           predicted protein [Populus trichocarpa]
          Length = 265

 Score =  200 bits (508), Expect(2) = 1e-65
 Identities = 113/199 (56%), Positives = 136/199 (68%), Gaps = 14/199 (7%)
 Frame = +3

Query: 303 LMDFPARSENMCYSRDEMPLQYSPMSEDSDDCPYCVSPINTSSSQPESVPTSPVSPYRYQ 482
           LM+ PARS+ M ++RDEM LQYSPMSED DD  +C +PIN  S Q ES+P SPVSPYRYQ
Sbjct: 64  LMESPARSDTMIFARDEMSLQYSPMSEDFDDSRFCETPINACSPQSESLPGSPVSPYRYQ 123

Query: 483 RVSSG---APPITSYPLPGSNLPVTCLQ----RSDSEGRFPSSPSDICHSADLRRAALMR 641
           R   G   AP  +S+   G ++  T  Q     SDSEGRFPSSPSDICHSADLRR AL+R
Sbjct: 124 RPLGGFSSAPYSSSFSSHGCSVTATYSQPRQRGSDSEGRFPSSPSDICHSADLRRTALLR 183

Query: 642 SVQMRTQSPGPSIFEMSFSPGQ------ETEQQPCCYMKSLVDEREDHVVDTCLTSAVSE 803
           SVQMRTQ  G S FE+ F  G       E E++PC YMKSLV+ERE + ++ C + ++SE
Sbjct: 184 SVQMRTQPLGSSSFELPFDSGHEPGSNIEAEERPCSYMKSLVEERE-YALEECSSMSISE 242

Query: 804 LE-TGEKPCRVLNMNLKVD 857
                EK CRVLNMN+K D
Sbjct: 243 PGFNEEKACRVLNMNIKGD 261



 Score = 77.4 bits (189), Expect(2) = 1e-65
 Identities = 36/42 (85%), Positives = 39/42 (92%)
 Frame = +2

Query: 176 GKRNRDPEDDVYVDNLNSHKRYLSEIMPSSLNGLTVGDSLPD 301
           GKR+RDPED+VY+DNLNSHKRYLSEIM SSLNGLTVGD L D
Sbjct: 21  GKRSRDPEDEVYLDNLNSHKRYLSEIMASSLNGLTVGDPLQD 62


>emb|CAN74686.1| hypothetical protein VITISV_020416 [Vitis vinifera]
          Length = 251

 Score =  191 bits (484), Expect(2) = 1e-61
 Identities = 118/208 (56%), Positives = 138/208 (66%), Gaps = 16/208 (7%)
 Frame = +3

Query: 294 YQTLMDFPARSENMCYSRDEMPLQYSPMSEDSDDCPYCVSPINTSSSQPESVPTSPVSPY 473
           ++ LM+ PAR        D+M LQYSPMSEDSDD  YC  PIN SSSQ +S+PTSPVSP+
Sbjct: 58  HENLMESPAR--------DDMSLQYSPMSEDSDDNRYCEIPINISSSQTDSLPTSPVSPH 109

Query: 474 RYQRVSSG--APPITSYPLPGSNLP-VTCLQR----SDSEG--RFPSSPSDICHSADLRR 626
           RYQR  S   +   T+ P  G  L  V C Q     SDSEG  RFPSSPSDICHSADLRR
Sbjct: 110 RYQRPFSALSSSGTTACPSHGCTLAAVACAQPRQRGSDSEGKTRFPSSPSDICHSADLRR 169

Query: 627 AALMRSVQMRTQSPGPSIFEMSFSPGQ------ETEQQPCCYMKSLVDEREDHVVDTCLT 788
           AAL+RSVQMR Q PGPS+FE+ FS GQ      ETE++PC     LVDER D+ ++ C +
Sbjct: 170 AALLRSVQMRAQPPGPSVFELPFSAGQEAVRNMETEERPC-----LVDER-DYRIEECSS 223

Query: 789 SAVSELE-TGEKPCRVLNMNLKVDEAAD 869
             +SE E   EK CRVLNMNLK +E  D
Sbjct: 224 MGISEHEFNREKSCRVLNMNLKGEEPGD 251



 Score = 73.6 bits (179), Expect(2) = 1e-61
 Identities = 34/40 (85%), Positives = 38/40 (95%)
 Frame = +2

Query: 176 GKRNRDPEDDVYVDNLNSHKRYLSEIMPSSLNGLTVGDSL 295
           GKR+RDPED+VY+DNL+SHKRYLSEIM SSLNGLTVGD L
Sbjct: 18  GKRSRDPEDEVYLDNLHSHKRYLSEIMASSLNGLTVGDPL 57


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