BLASTX nr result

ID: Bupleurum21_contig00017775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017775
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19281.3| unnamed protein product [Vitis vinifera]              152   2e-35
ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248...   152   2e-35
emb|CAN68130.1| hypothetical protein VITISV_043708 [Vitis vinifera]   147   7e-34
ref|XP_002514056.1| protein with unknown function [Ricinus commu...   137   7e-31
ref|XP_004134583.1| PREDICTED: geranylgeranyl transferase type-2...   129   3e-28

>emb|CBI19281.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/107 (66%), Positives = 83/107 (77%)
 Frame = -1

Query: 397 SALDPLRLLKSLNVLDISYNEIGAHTVDTRRYLCSSPLSHTTGGDMRFEELTASGMKDAN 218
           +AL+PLRLLK L VLDISYNEIGAH VDTRRYLCSSPLSHT G D  F E      K  N
Sbjct: 209 TALEPLRLLKLLKVLDISYNEIGAHPVDTRRYLCSSPLSHTVGSDWNFNEFVPDDAKVTN 268

Query: 217 YWEAYSVLECLNLTELDVVGNAIVNESFKSFLLNLMPKLKWLDGEEL 77
           YWEA+++    NLT+LD+VGNAI +E FKSFL+ ++P LKW+DGEEL
Sbjct: 269 YWEAFAIFRGFNLTQLDIVGNAITDEKFKSFLIKVLPTLKWVDGEEL 315


>ref|XP_002283768.1| PREDICTED: uncharacterized protein LOC100248920 [Vitis vinifera]
          Length = 704

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/107 (66%), Positives = 83/107 (77%)
 Frame = -1

Query: 397 SALDPLRLLKSLNVLDISYNEIGAHTVDTRRYLCSSPLSHTTGGDMRFEELTASGMKDAN 218
           +AL+PLRLLK L VLDISYNEIGAH VDTRRYLCSSPLSHT G D  F E      K  N
Sbjct: 597 TALEPLRLLKLLKVLDISYNEIGAHPVDTRRYLCSSPLSHTVGSDWNFNEFVPDDAKVTN 656

Query: 217 YWEAYSVLECLNLTELDVVGNAIVNESFKSFLLNLMPKLKWLDGEEL 77
           YWEA+++    NLT+LD+VGNAI +E FKSFL+ ++P LKW+DGEEL
Sbjct: 657 YWEAFAIFRGFNLTQLDIVGNAITDEKFKSFLIKVLPTLKWVDGEEL 703


>emb|CAN68130.1| hypothetical protein VITISV_043708 [Vitis vinifera]
          Length = 216

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/115 (60%), Positives = 85/115 (73%)
 Frame = -1

Query: 397 SALDPLRLLKSLNVLDISYNEIGAHTVDTRRYLCSSPLSHTTGGDMRFEELTASGMKDAN 218
           +AL+PLRLLK L VLDISYNEIGAH VDTRRYLCSSPLSHT G D  F E      K  N
Sbjct: 18  TALEPLRLLKLLKVLDISYNEIGAHPVDTRRYLCSSPLSHTVGSDWNFNEFVPDDAKVTN 77

Query: 217 YWEAYSVLECLNLTELDVVGNAIVNESFKSFLLNLMPKLKWLDGEELQ*YSVLLL 53
           YWEA+++    NLT+LD+VGNAI +E FKSFL+ ++P LKW+DG  +    +L+L
Sbjct: 78  YWEAFAIFRGFNLTQLDIVGNAITDEKFKSFLIKVLPTLKWVDGCPMSLPLILIL 132


>ref|XP_002514056.1| protein with unknown function [Ricinus communis]
           gi|223547142|gb|EEF48639.1| protein with unknown
           function [Ricinus communis]
          Length = 696

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/107 (59%), Positives = 84/107 (78%)
 Frame = -1

Query: 397 SALDPLRLLKSLNVLDISYNEIGAHTVDTRRYLCSSPLSHTTGGDMRFEELTASGMKDAN 218
           ++L+PLR LKSL +LDISYNEIG H++DT RYLCSSPLSH+ G +   ++    G+   N
Sbjct: 589 TSLEPLRQLKSLKMLDISYNEIGLHSIDTTRYLCSSPLSHSVGNEWEQDKTVIYGIDMTN 648

Query: 217 YWEAYSVLECLNLTELDVVGNAIVNESFKSFLLNLMPKLKWLDGEEL 77
           YWEA+ VL+ LNLT+LDV+GNAI +E F SFL+ ++PKLKWLDG +L
Sbjct: 649 YWEAFFVLKGLNLTQLDVLGNAIADEKFTSFLVKVLPKLKWLDGVKL 695


>ref|XP_004134583.1| PREDICTED: geranylgeranyl transferase type-2 subunit alpha-like
           [Cucumis sativus] gi|449490592|ref|XP_004158649.1|
           PREDICTED: geranylgeranyl transferase type-2 subunit
           alpha-like [Cucumis sativus]
          Length = 695

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/108 (55%), Positives = 85/108 (78%)
 Frame = -1

Query: 397 SALDPLRLLKSLNVLDISYNEIGAHTVDTRRYLCSSPLSHTTGGDMRFEELTASGMKDAN 218
           +AL+PLRLLKSL VLDISYNEIG+H++DT RYL SSPLSH+   D+  +E+  +    A+
Sbjct: 588 TALEPLRLLKSLKVLDISYNEIGSHSIDTTRYLFSSPLSHSEEIDLSSDEMATNCTDLAS 647

Query: 217 YWEAYSVLECLNLTELDVVGNAIVNESFKSFLLNLMPKLKWLDGEELQ 74
           YWEAY + + ++L +LD+ GN I +ESFK+FL+ ++PKL WLDG+++Q
Sbjct: 648 YWEAYFLFKDISLMQLDIEGNTISSESFKAFLVKILPKLHWLDGKQVQ 695


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