BLASTX nr result

ID: Bupleurum21_contig00017747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017747
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260...   187   2e-45
gb|ACD56615.1| predicted protein [Gossypioides kirkii]                181   1e-43
ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|2...   172   9e-41
ref|XP_002513809.1| conserved hypothetical protein [Ricinus comm...   168   1e-39
ref|XP_004150445.1| PREDICTED: uncharacterized protein LOC101207...   162   5e-38

>ref|XP_002285854.1| PREDICTED: uncharacterized protein LOC100260772 [Vitis vinifera]
          Length = 200

 Score =  187 bits (475), Expect = 2e-45
 Identities = 120/231 (51%), Positives = 144/231 (62%), Gaps = 6/231 (2%)
 Frame = +1

Query: 40  MNNYDHREDKSCYFHPTEFIIGVCHMCLNERLIVLASKQSNNNNLLHKAKSRRSLIRNFS 219
           MN Y       CYFHP E I+GVC +CLNERL++LA+KQ +++  L K   R        
Sbjct: 1   MNLYREDNPCCCYFHPKEVIVGVCPLCLNERLLILAAKQGHHS--LAKGHHRT------- 51

Query: 220 FSSSNEQKPQAIVNNNLPKIFAIGSLLNRFEFRHRKSQDHEDFSTDASSSHEDSFISIKF 399
             S   +KP      NLPKIFA+GS L R EFRH KS DH D   DAS+S EDSFISIKF
Sbjct: 52  -HSLMHKKPPI----NLPKIFALGSFLTRLEFRHWKS-DHSDH--DASTSQEDSFISIKF 103

Query: 400 ENNNGIGSWEXXXXXXXXXXXXXXXLEHCNFSWNHNLVSKASSTNKTVVEHVKPQSSKLR 579
           E +NG+ SWE               L+HC     +  +SK     K+VVEH KP+++ LR
Sbjct: 104 E-DNGVASWE-------KTTATKVPLQHC----TNMPLSKEVKGTKSVVEHAKPRAT-LR 150

Query: 580 WRKRIGHLFQLSKWKRSS---VCHVGGKQLEGVKV---GWIRSLTKRRTKE 714
           WRKRIGHLFQL +WKRSS   VCHVG K +EGVKV   GWIR+LTKR+TKE
Sbjct: 151 WRKRIGHLFQLIRWKRSSKANVCHVGSK-VEGVKVMRKGWIRTLTKRKTKE 200


>gb|ACD56615.1| predicted protein [Gossypioides kirkii]
          Length = 196

 Score =  181 bits (460), Expect = 1e-43
 Identities = 113/221 (51%), Positives = 139/221 (62%), Gaps = 6/221 (2%)
 Frame = +1

Query: 55  HREDKSC-YFHPTEFIIGVCHMCLNERLIVLASKQSNNNNLLHKAKSRRSLIRNFSFSSS 231
           +RED SC YFHP E +IGVC +CLNERL+ LASKQ+  ++     KS   LI   +    
Sbjct: 5   YREDNSCCYFHPKEVVIGVCPLCLNERLLFLASKQAQRSS-SSTCKSSHRLIHGVAV--- 60

Query: 232 NEQKPQAIVNNNLPKIFAIGSLLNRFEFRHRKSQDHEDFSTDASSSHEDSFISIKFENNN 411
             +KP      NLPKIFA+GSLLNR EF+H KS++ +  + DAS+S EDSFISIKFE  N
Sbjct: 61  --KKPPI----NLPKIFALGSLLNRLEFKHCKSENSD--AHDASTSQEDSFISIKFE-EN 111

Query: 412 GIGSWEXXXXXXXXXXXXXXXLEHCNFSWNHNLVSKASSTNKTVVEHVKPQSSKLRWRKR 591
           G+GSW+               LEHC+ SWN      +  T K+V+EH KP +S LRWRKR
Sbjct: 112 GVGSWD-------KGTVSKVSLEHCSMSWN-----PSKDTKKSVIEHAKPGAS-LRWRKR 158

Query: 592 IGHLFQLSKWKRSSVCHVGGKQLEGVKV-----GWIRSLTK 699
           IGHLFQL +WKRSS       ++EGVKV      WIRSLTK
Sbjct: 159 IGHLFQLIRWKRSS-------KVEGVKVMRRKGWWIRSLTK 192


>ref|XP_002302235.1| predicted protein [Populus trichocarpa] gi|222843961|gb|EEE81508.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  172 bits (435), Expect = 9e-41
 Identities = 110/236 (46%), Positives = 140/236 (59%), Gaps = 11/236 (4%)
 Frame = +1

Query: 40  MNNYDHREDKSCYFHPTEFIIGVCHMCLNERLIVLASKQSNNNNLLHKAKSRRSLIRNFS 219
           MN     ++  CYFHP E  +G+C +CLNERL++LA+KQ +         + R   RN  
Sbjct: 1   MNACRSEDNSYCYFHPKEVFVGICPLCLNERLLILATKQGS-------LSAARETHRN-- 51

Query: 220 FSSSNEQKPQAIVNNNLPKIFAIGSLLNRFEFRHRKSQDHEDFSTDASSSHEDSFISIKF 399
              +  +KP      NL KIFA G LLNRFEFRH KS + +  +  A +S EDSFISIKF
Sbjct: 52  -EGTAHRKPPI----NLTKIFAFGYLLNRFEFRHGKSDNSDQDA--AYTSQEDSFISIKF 104

Query: 400 ENNNGIGSWEXXXXXXXXXXXXXXXLEHCNFSWNHNLVSKA-----SSTNKTVVEHVKPQ 564
           E +NG   WE               +E C+ SWN NL  +A     +    TV+EH KP 
Sbjct: 105 E-DNGAAFWE-------KGTVSKVSIEPCSKSWNQNLNKEAKQGKDTKEAMTVIEHAKPH 156

Query: 565 SSKLRWRKRIGHLFQLSKWKRSS----VCHVGGKQLEGVKV--GWIRSLTKRRTKE 714
           +S LRWR+RIGH+FQL + KRSS    +CHV G ++EGVKV  GWIR+LTKRRTKE
Sbjct: 157 AS-LRWRRRIGHMFQLIRRKRSSNKGHMCHV-GTEVEGVKVRKGWIRTLTKRRTKE 210


>ref|XP_002513809.1| conserved hypothetical protein [Ricinus communis]
           gi|223546895|gb|EEF48392.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  168 bits (425), Expect = 1e-39
 Identities = 117/244 (47%), Positives = 147/244 (60%), Gaps = 19/244 (7%)
 Frame = +1

Query: 40  MNNYDHREDKSC-YFHPTEFIIGVCHMCLNERLIVLASKQSNNNNLLHKAKSRRSLIRNF 216
           MN Y  RED SC YFHP + +IGVC +CLNERL+VLA+KQS+      + +         
Sbjct: 1   MNGY--REDNSCCYFHPKDAVIGVCAVCLNERLLVLAAKQSSRTTATLRTQ--------- 49

Query: 217 SFSSSNEQKPQAIVNNNLPKIFAIGSLLNRFEFRHRKSQDHEDFSTDASSS-HEDSFISI 393
                + +KP      +LPKIF + SLLNR EFRH K  D  D ++D S+S  EDSFISI
Sbjct: 50  ---DVSPKKPPI----SLPKIFTLSSLLNRLEFRHWKLSD--DNNSDVSTSPEEDSFISI 100

Query: 394 KFENNNGIGSWEXXXXXXXXXXXXXXXLEHCNFSW-NHNLVSKASS---TNK-------T 540
           KFE +NG  SWE                + C+ SW N N +SK  +    NK       +
Sbjct: 101 KFE-DNGAASWEKSNTVSKVCLE-----KQCSKSWINQNQMSKEEAKQDINKDMTKETMS 154

Query: 541 VVEHVKPQSSKLRWRKRIGHLFQLSKWKRS---SVCHVGGKQLEGVKV---GWIRSLTKR 702
           V+EH +P+++ LRWRKRIGHLFQ+ K KRS   ++CHVG K +EGVKV   GWIRSLTKR
Sbjct: 155 VIEHARPRAA-LRWRKRIGHLFQVIKLKRSNKGNMCHVGTK-VEGVKVMRKGWIRSLTKR 212

Query: 703 RTKE 714
           RTKE
Sbjct: 213 RTKE 216


>ref|XP_004150445.1| PREDICTED: uncharacterized protein LOC101207127 [Cucumis sativus]
           gi|449522317|ref|XP_004168173.1| PREDICTED:
           uncharacterized LOC101207127 [Cucumis sativus]
          Length = 190

 Score =  162 bits (411), Expect = 5e-38
 Identities = 102/225 (45%), Positives = 132/225 (58%), Gaps = 5/225 (2%)
 Frame = +1

Query: 55  HREDKSCYFHPTEFIIGVCHMCLNERLIVLASKQSNNNNLLHKAKSRRSLIRNFSFSSSN 234
           +R+  SCYFHP E ++GVC +CLNE+L++LAS++                   +  SS  
Sbjct: 4   YRDPNSCYFHPKEKVVGVCALCLNEKLLILASRRG-----------------RYHHSSPR 46

Query: 235 EQKPQAIVNNNLPKIFAIGSLLNRFEFRHRKSQDHEDFSTDASSSHEDSFISIKFENNNG 414
             +   I   NL KIFA  S ++R EFRH K ++ +D   +AS+S EDSFISI F   NG
Sbjct: 47  TCRKTPI---NLSKIFAFSSFISRLEFRHWKPENSDD---EASTSQEDSFISINF-GKNG 99

Query: 415 IGSWEXXXXXXXXXXXXXXXLEHCNFSWNHNLVSKASSTNKTVVEHVKPQSSKLRWRKRI 594
           +GSWE               LE+C  SWNH+L +K S   KTV+EH K ++S LRWRKRI
Sbjct: 100 VGSWE-------ENKVSEVSLENCILSWNHHL-TKDSKETKTVIEHSKTRAS-LRWRKRI 150

Query: 595 GHLFQLSKWKRS---SVCHVGGKQLEGVKV--GWIRSLTKRRTKE 714
           GHLFQL + KRS   +VCHV     EGVK   GWIR+LT+ R  E
Sbjct: 151 GHLFQLIRRKRSNKGTVCHV-----EGVKTRKGWIRALTRSRNTE 190


Top