BLASTX nr result
ID: Bupleurum21_contig00017741
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017741 (412 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g2942... 94 1e-17 ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] g... 91 7e-17 ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm... 91 1e-16 ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata sub... 87 2e-15 ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]... 87 2e-15 >ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Brachypodium distachyon] Length = 448 Score = 93.6 bits (231), Expect = 1e-17 Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 4/141 (2%) Frame = +2 Query: 2 DLFLTAGAFSDGWM-TKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNA 178 DL+LT G W T G L+ + I+DF QS +++ L V+S CH+L +L L+NA Sbjct: 121 DLYLTGGESVAAWAGTAAGPSLREVDIADFWPQSCWRKAEALPVISHFCHNLSKLGLRNA 180 Query: 179 ELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNL 358 LCV+ + MP LT L L + + D L+KL EC PCLQ+L L ++ G + PKIH L Sbjct: 181 WLCVDGLKIMPNLTHLALEFIRLDDEDLSKLNECFPCLQILKLI-KVGGLKDPKIHFPQL 239 Query: 359 KELKCMW---GDFRSITIFAP 412 K C W RS+ I AP Sbjct: 240 K--TCCWEVSNVPRSLAIHAP 258 >ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] gi|113531812|dbj|BAF04195.1| Os01g0193500 [Oryza sativa Japonica Group] Length = 453 Score = 91.3 bits (225), Expect = 7e-17 Identities = 61/141 (43%), Positives = 80/141 (56%), Gaps = 4/141 (2%) Frame = +2 Query: 2 DLFLTAGAFSDGWM-TKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNA 178 DL LTA W T G L+ + ++D+ QS +++ L V+S CHSL++L LKNA Sbjct: 124 DLHLTAREAVVAWADTAAGNALREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNA 183 Query: 179 ELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNL 358 L V+ + MP LT LTL + + D LNKL EC PCLQ+L L + G + PKIH L Sbjct: 184 WLSVDGLKIMPNLTHLTLEFIRLDDEDLNKLNECFPCLQILNLI-GVGGLKDPKIHLHQL 242 Query: 359 KELKCMW---GDFRSITIFAP 412 K C W RS+TI AP Sbjct: 243 K--TCHWEVSNVPRSLTIRAP 261 >ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis] gi|223530307|gb|EEF32202.1| conserved hypothetical protein [Ricinus communis] Length = 460 Score = 90.5 bits (223), Expect = 1e-16 Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 5/142 (3%) Frame = +2 Query: 2 DLFLTAGAFSDGWMT--KIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKN 175 DL+L+ F W+ ++ + LK + ISDF Q+ ++ + IL ++S CH L+EL +KN Sbjct: 110 DLYLSEVEFVKEWLLLPRVCRELKFLSISDFWIQACWRRSQILALVSSCCHGLLELEVKN 169 Query: 176 AELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLN 355 + L V+ + PMP+LT LTL + + D +L+K+ C PCL+VL L + G PKIH + Sbjct: 170 SWLSVDGLIPMPVLTSLTLESIRLDDENLSKVNHCFPCLKVLNLV-GVGGLREPKIHLYH 228 Query: 356 LKELKCMW---GDFRSITIFAP 412 L+ C W S++IFAP Sbjct: 229 LR--TCRWTVSNAPNSLSIFAP 248 >ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297313245|gb|EFH43668.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 445 Score = 86.7 bits (213), Expect = 2e-15 Identities = 49/126 (38%), Positives = 77/126 (61%) Frame = +2 Query: 2 DLFLTAGAFSDGWMTKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNAE 181 DL+LT F+ W+ ++ + L+ + ISDF QS +++++IL ++S NC LV+L +KN+ Sbjct: 103 DLYLTDVEFAKEWLPRVREDLEMLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNSW 162 Query: 182 LCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNLK 361 L V + M L LTL + + D +L K+ +C P LQVL L + G + P+IH L+LK Sbjct: 163 LSVVGLREMSNLRHLTLEFIRLDDENLEKVNDCFPFLQVLNLI-GVGGLKEPRIHFLHLK 221 Query: 362 ELKCMW 379 C W Sbjct: 222 --SCHW 225 >ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana] gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName: Full=F-box/LRR-repeat protein At4g29420 gi|7269841|emb|CAB79700.1| hypothetical protein [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1| At4g29420 [Arabidopsis thaliana] gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein [Arabidopsis thaliana] Length = 446 Score = 86.7 bits (213), Expect = 2e-15 Identities = 50/126 (39%), Positives = 77/126 (61%) Frame = +2 Query: 2 DLFLTAGAFSDGWMTKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNAE 181 DL+LT F W+ ++ + L+++ ISDF QS +++++IL ++S NC LV+L +KNA Sbjct: 103 DLYLTDVEFVKEWLPRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAW 162 Query: 182 LCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNLK 361 L V + MP L LTL + + D +L K+ +C P LQ L L + G + P+IH L+LK Sbjct: 163 LSVVGLTEMPNLRYLTLEFIRLDDENLEKVNDCFPFLQELNLI-GVGGLKEPRIHFLHLK 221 Query: 362 ELKCMW 379 C W Sbjct: 222 --SCHW 225