BLASTX nr result

ID: Bupleurum21_contig00017741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017741
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    94   1e-17
ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] g...    91   7e-17
ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata sub...    87   2e-15
ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...    87   2e-15

>ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Brachypodium
           distachyon]
          Length = 448

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   DLFLTAGAFSDGWM-TKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNA 178
           DL+LT G     W  T  G  L+ + I+DF  QS +++   L V+S  CH+L +L L+NA
Sbjct: 121 DLYLTGGESVAAWAGTAAGPSLREVDIADFWPQSCWRKAEALPVISHFCHNLSKLGLRNA 180

Query: 179 ELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNL 358
            LCV+ +  MP LT L L  + + D  L+KL EC PCLQ+L L  ++ G + PKIH   L
Sbjct: 181 WLCVDGLKIMPNLTHLALEFIRLDDEDLSKLNECFPCLQILKLI-KVGGLKDPKIHFPQL 239

Query: 359 KELKCMW---GDFRSITIFAP 412
           K   C W      RS+ I AP
Sbjct: 240 K--TCCWEVSNVPRSLAIHAP 258


>ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group]
           gi|113531812|dbj|BAF04195.1| Os01g0193500 [Oryza sativa
           Japonica Group]
          Length = 453

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 61/141 (43%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
 Frame = +2

Query: 2   DLFLTAGAFSDGWM-TKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNA 178
           DL LTA      W  T  G  L+ + ++D+  QS +++   L V+S  CHSL++L LKNA
Sbjct: 124 DLHLTAREAVVAWADTAAGNALREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNA 183

Query: 179 ELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNL 358
            L V+ +  MP LT LTL  + + D  LNKL EC PCLQ+L L   + G + PKIH   L
Sbjct: 184 WLSVDGLKIMPNLTHLTLEFIRLDDEDLNKLNECFPCLQILNLI-GVGGLKDPKIHLHQL 242

Query: 359 KELKCMW---GDFRSITIFAP 412
           K   C W      RS+TI AP
Sbjct: 243 K--TCHWEVSNVPRSLTIRAP 261


>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 5/142 (3%)
 Frame = +2

Query: 2   DLFLTAGAFSDGWMT--KIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKN 175
           DL+L+   F   W+   ++ + LK + ISDF  Q+ ++ + IL ++S  CH L+EL +KN
Sbjct: 110 DLYLSEVEFVKEWLLLPRVCRELKFLSISDFWIQACWRRSQILALVSSCCHGLLELEVKN 169

Query: 176 AELCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLN 355
           + L V+ + PMP+LT LTL  + + D +L+K+  C PCL+VL L   + G   PKIH  +
Sbjct: 170 SWLSVDGLIPMPVLTSLTLESIRLDDENLSKVNHCFPCLKVLNLV-GVGGLREPKIHLYH 228

Query: 356 LKELKCMW---GDFRSITIFAP 412
           L+   C W       S++IFAP
Sbjct: 229 LR--TCRWTVSNAPNSLSIFAP 248


>ref|XP_002867409.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297313245|gb|EFH43668.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 445

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/126 (38%), Positives = 77/126 (61%)
 Frame = +2

Query: 2   DLFLTAGAFSDGWMTKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNAE 181
           DL+LT   F+  W+ ++ + L+ + ISDF  QS +++++IL ++S NC  LV+L +KN+ 
Sbjct: 103 DLYLTDVEFAKEWLPRVREDLEMLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNSW 162

Query: 182 LCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNLK 361
           L V  +  M  L  LTL  + + D +L K+ +C P LQVL L   + G + P+IH L+LK
Sbjct: 163 LSVVGLREMSNLRHLTLEFIRLDDENLEKVNDCFPFLQVLNLI-GVGGLKEPRIHFLHLK 221

Query: 362 ELKCMW 379
              C W
Sbjct: 222 --SCHW 225


>ref|NP_194671.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75264516|sp|Q9M0E1.1|FBL77_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g29420
           gi|7269841|emb|CAB79700.1| hypothetical protein
           [Arabidopsis thaliana] gi|109946621|gb|ABG48489.1|
           At4g29420 [Arabidopsis thaliana]
           gi|332660229|gb|AEE85629.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 446

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/126 (39%), Positives = 77/126 (61%)
 Frame = +2

Query: 2   DLFLTAGAFSDGWMTKIGQGLKSILISDFPAQSAFKETNILEVLSCNCHSLVELTLKNAE 181
           DL+LT   F   W+ ++ + L+++ ISDF  QS +++++IL ++S NC  LV+L +KNA 
Sbjct: 103 DLYLTDVEFVKEWLPRVREDLENLSISDFWIQSCWRKSDILALISSNCSKLVKLEVKNAW 162

Query: 182 LCVEDMHPMPLLTRLTLMDVEILDSHLNKLMECLPCLQVLILFQRLCGNESPKIHHLNLK 361
           L V  +  MP L  LTL  + + D +L K+ +C P LQ L L   + G + P+IH L+LK
Sbjct: 163 LSVVGLTEMPNLRYLTLEFIRLDDENLEKVNDCFPFLQELNLI-GVGGLKEPRIHFLHLK 221

Query: 362 ELKCMW 379
              C W
Sbjct: 222 --SCHW 225


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