BLASTX nr result

ID: Bupleurum21_contig00017735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017735
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|35548...    64   2e-08
ref|XP_003622656.1| F-box/kelch-repeat protein [Medicago truncat...    62   5e-08
ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|35548...    62   5e-08
ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, ...    61   1e-07
ref|XP_003594508.1| F-box family protein [Medicago truncatula] g...    61   1e-07

>ref|XP_003598113.1| F-box protein [Medicago truncatula] gi|355487161|gb|AES68364.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
 Frame = -2

Query: 198 STKKNRSNKISTNSSAN------PSLPVELILQILQFLPVLSLLKFRSACKLWLSMISSP 37
           STKK R  K  T+ S +      P LP ELI +IL  LPV  LL+ R ACK W S+IS+P
Sbjct: 27  STKKKRVTKTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNP 86

Query: 36  KFVKLHLSKSS 4
           KF K HLS S+
Sbjct: 87  KFAKKHLSMST 97


>ref|XP_003622656.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355497671|gb|AES78874.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 512

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 2/63 (3%)
 Frame = -2

Query: 183 RSNKISTNSSANPS--LPVELILQILQFLPVLSLLKFRSACKLWLSMISSPKFVKLHLSK 10
           R ++   NS ++P+  LP ELI+++L FLPV +L++ RS CK W S++S+P FVK HL +
Sbjct: 6   RKSQRPPNSMSSPTIFLPDELIVEVLSFLPVKTLMRLRSCCKSWNSLVSNPLFVKSHLQR 65

Query: 9   SSE 1
           S++
Sbjct: 66  STQ 68


>ref|XP_003598109.1| F-box protein [Medicago truncatula] gi|355487157|gb|AES68360.1|
           F-box protein [Medicago truncatula]
          Length = 405

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/70 (51%), Positives = 43/70 (61%), Gaps = 6/70 (8%)
 Frame = -2

Query: 195 TKKNRSNKISTNSSAN------PSLPVELILQILQFLPVLSLLKFRSACKLWLSMISSPK 34
           TKK R  K  T+ S +      P LP ELI +IL  LPV  LL+ R ACK W S+IS+PK
Sbjct: 28  TKKKRVTKTLTSPSLHALPLPLPFLPFELIEEILSRLPVKLLLQLRCACKSWSSLISNPK 87

Query: 33  FVKLHLSKSS 4
           F K HLS S+
Sbjct: 88  FAKKHLSMST 97


>ref|XP_003638382.1| Nuclear transcription factor Y subunit A-7, partial [Medicago
           truncatula] gi|355504317|gb|AES85520.1| Nuclear
           transcription factor Y subunit A-7, partial [Medicago
           truncatula]
          Length = 455

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = -2

Query: 210 DSQRSTKKNRSNKISTNSSANPSLPVELILQILQFLPVLSLLKFRSACKLWLSMISSPKF 31
           +S   T  + ++  S++SS  P+LP E++ +IL  LPV  L++ +S CK W S+IS PKF
Sbjct: 28  NSSTETLSSLTSPSSSSSSTIPTLPFEIVAEILSRLPVKYLMQLQSVCKSWKSLISDPKF 87

Query: 30  VKLHLSKSS 4
           +K HL  S+
Sbjct: 88  IKKHLHVST 96


>ref|XP_003594508.1| F-box family protein [Medicago truncatula]
           gi|355483556|gb|AES64759.1| F-box family protein
           [Medicago truncatula]
          Length = 597

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 45/69 (65%)
 Frame = -2

Query: 210 DSQRSTKKNRSNKISTNSSANPSLPVELILQILQFLPVLSLLKFRSACKLWLSMISSPKF 31
           +S   T  + ++  S++SS  P+LP E++ +IL  LPV  L++ +S CK W S+IS PKF
Sbjct: 28  NSSTETLSSLTSPSSSSSSTIPTLPFEIVAEILSRLPVKYLMQLQSVCKSWKSLISDPKF 87

Query: 30  VKLHLSKSS 4
           +K HL  S+
Sbjct: 88  IKKHLHVST 96


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