BLASTX nr result
ID: Bupleurum21_contig00017718
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017718 (442 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [... 180 9e-44 ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen... 177 1e-42 ref|XP_002301364.1| chromatin remodeling complex subunit [Populu... 173 1e-41 ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [... 172 2e-41 ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com... 172 2e-41 >ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus] Length = 2247 Score = 180 bits (457), Expect = 9e-44 Identities = 91/139 (65%), Positives = 108/139 (77%), Gaps = 8/139 (5%) Frame = -3 Query: 440 IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261 IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR Sbjct: 1503 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1562 Query: 260 GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV------- 102 E+EV LFDQMD+EFDW E+MTRYD++PKWL S EVN + NLS+KPSK + Sbjct: 1563 SEDEVELFDQMDEEFDWTEEMTRYDQIPKWLRASTREVNNAIANLSKKPSKNILFGAGYG 1622 Query: 101 -GATNMGSDVSLIPARTRG 48 ++ +GSD SL R RG Sbjct: 1623 LESSELGSDSSLRTERKRG 1641 >ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like [Cucumis sativus] Length = 2251 Score = 177 bits (448), Expect = 1e-42 Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 8/139 (5%) Frame = -3 Query: 440 IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261 IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR Sbjct: 1507 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1566 Query: 260 GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV------- 102 E+EV LFDQMD+EFDW E+MTR D++PKWL S EVN + NLS+KPSK + Sbjct: 1567 SEDEVELFDQMDEEFDWTEEMTRCDQIPKWLRASTREVNNAIANLSKKPSKNILFGAGYG 1626 Query: 101 -GATNMGSDVSLIPARTRG 48 ++ +GSD SL R RG Sbjct: 1627 LESSELGSDSSLRTERKRG 1645 >ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222843090|gb|EEE80637.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 2222 Score = 173 bits (438), Expect = 1e-41 Identities = 82/113 (72%), Positives = 100/113 (88%) Frame = -3 Query: 440 IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261 IQQ KI+MADEVINAGRFD +TTHEER +TLE++LHD +RYQE +H+VPSLQEVNRMIAR Sbjct: 1483 IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLQEVNRMIAR 1542 Query: 260 GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV 102 E+EV LFDQMD+EFDW+E+MTRYD+VPKWL S +EV+AT+ LS+KPSK + Sbjct: 1543 SEDEVELFDQMDEEFDWIEEMTRYDQVPKWLRASTKEVDATIAVLSKKPSKAI 1595 >ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera] Length = 2263 Score = 172 bits (437), Expect = 2e-41 Identities = 88/139 (63%), Positives = 106/139 (76%), Gaps = 8/139 (5%) Frame = -3 Query: 440 IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261 IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR Sbjct: 1510 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1569 Query: 260 GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQ-------- 105 E+EV LFDQMD+E +W+E MTRYD+VPKWL S +VN + NLS+KPSK Sbjct: 1570 SEDEVELFDQMDEELNWIEDMTRYDQVPKWLRASTRDVNIAVANLSKKPSKNTFFAANIG 1629 Query: 104 VGATNMGSDVSLIPARTRG 48 + ++ GSD+S R RG Sbjct: 1630 LESSEKGSDLSPKTERKRG 1648 >ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis] gi|223549062|gb|EEF50551.1| Chromo domain protein, putative [Ricinus communis] Length = 2248 Score = 172 bits (437), Expect = 2e-41 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 2/133 (1%) Frame = -3 Query: 440 IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261 IQQ KI+MADEVINAGRFD +TTHEER +TLE++LHD +RYQE VHNVPSLQEVNRMIAR Sbjct: 1504 IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHNVPSLQEVNRMIAR 1563 Query: 260 GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV-GATNMG 84 E+EV LFDQMD++ DW E+MT YD+VPKWL S +VNA + NLS+KPSK + A+++G Sbjct: 1564 SEDEVELFDQMDEDLDWTEEMTSYDQVPKWLRASTRDVNAAIANLSKKPSKNILYASSVG 1623 Query: 83 SDVSLIPA-RTRG 48 + S + R RG Sbjct: 1624 MESSEVETERKRG 1636