BLASTX nr result

ID: Bupleurum21_contig00017718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017718
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...   180   9e-44
ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   177   1e-42
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   173   1e-41
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   172   2e-41
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   172   2e-41

>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score =  180 bits (457), Expect = 9e-44
 Identities = 91/139 (65%), Positives = 108/139 (77%), Gaps = 8/139 (5%)
 Frame = -3

Query: 440  IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261
            IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR
Sbjct: 1503 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1562

Query: 260  GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV------- 102
             E+EV LFDQMD+EFDW E+MTRYD++PKWL  S  EVN  + NLS+KPSK +       
Sbjct: 1563 SEDEVELFDQMDEEFDWTEEMTRYDQIPKWLRASTREVNNAIANLSKKPSKNILFGAGYG 1622

Query: 101  -GATNMGSDVSLIPARTRG 48
              ++ +GSD SL   R RG
Sbjct: 1623 LESSELGSDSSLRTERKRG 1641


>ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like
            [Cucumis sativus]
          Length = 2251

 Score =  177 bits (448), Expect = 1e-42
 Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 8/139 (5%)
 Frame = -3

Query: 440  IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261
            IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR
Sbjct: 1507 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1566

Query: 260  GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV------- 102
             E+EV LFDQMD+EFDW E+MTR D++PKWL  S  EVN  + NLS+KPSK +       
Sbjct: 1567 SEDEVELFDQMDEEFDWTEEMTRCDQIPKWLRASTREVNNAIANLSKKPSKNILFGAGYG 1626

Query: 101  -GATNMGSDVSLIPARTRG 48
              ++ +GSD SL   R RG
Sbjct: 1627 LESSELGSDSSLRTERKRG 1645


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  173 bits (438), Expect = 1e-41
 Identities = 82/113 (72%), Positives = 100/113 (88%)
 Frame = -3

Query: 440  IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261
            IQQ KI+MADEVINAGRFD +TTHEER +TLE++LHD +RYQE +H+VPSLQEVNRMIAR
Sbjct: 1483 IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETLHDVPSLQEVNRMIAR 1542

Query: 260  GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV 102
             E+EV LFDQMD+EFDW+E+MTRYD+VPKWL  S +EV+AT+  LS+KPSK +
Sbjct: 1543 SEDEVELFDQMDEEFDWIEEMTRYDQVPKWLRASTKEVDATIAVLSKKPSKAI 1595


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/139 (63%), Positives = 106/139 (76%), Gaps = 8/139 (5%)
 Frame = -3

Query: 440  IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261
            IQQ KI+MADEVINAGRFD +TTHEER LTLE++LHD +RYQE VH+VPSLQEVNRMIAR
Sbjct: 1510 IQQYKIDMADEVINAGRFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLQEVNRMIAR 1569

Query: 260  GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQ-------- 105
             E+EV LFDQMD+E +W+E MTRYD+VPKWL  S  +VN  + NLS+KPSK         
Sbjct: 1570 SEDEVELFDQMDEELNWIEDMTRYDQVPKWLRASTRDVNIAVANLSKKPSKNTFFAANIG 1629

Query: 104  VGATNMGSDVSLIPARTRG 48
            + ++  GSD+S    R RG
Sbjct: 1630 LESSEKGSDLSPKTERKRG 1648


>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  172 bits (437), Expect = 2e-41
 Identities = 87/133 (65%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
 Frame = -3

Query: 440  IQQSKIEMADEVINAGRFDLKTTHEERCLTLESMLHD*DRYQEIVHNVPSLQEVNRMIAR 261
            IQQ KI+MADEVINAGRFD +TTHEER +TLE++LHD +RYQE VHNVPSLQEVNRMIAR
Sbjct: 1504 IQQYKIDMADEVINAGRFDQRTTHEERRMTLETLLHDEERYQETVHNVPSLQEVNRMIAR 1563

Query: 260  GEEEVTLFDQMDKEFDWVEQMTRYDEVPKWLCTSMEEVNATMNNLSRKPSKQV-GATNMG 84
             E+EV LFDQMD++ DW E+MT YD+VPKWL  S  +VNA + NLS+KPSK +  A+++G
Sbjct: 1564 SEDEVELFDQMDEDLDWTEEMTSYDQVPKWLRASTRDVNAAIANLSKKPSKNILYASSVG 1623

Query: 83   SDVSLIPA-RTRG 48
             + S +   R RG
Sbjct: 1624 MESSEVETERKRG 1636


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