BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017711
         (1164 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   244   4e-62
ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   211   3e-52
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   204   3e-50
ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis t...   204   3e-50
ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   202   2e-49

>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  244 bits (622), Expect = 4e-62
 Identities = 145/291 (49%), Positives = 173/291 (59%), Gaps = 17/291 (5%)
 Frame = -2

Query: 869 YLILRYLXXXXXXXXXXXSAVDDVIPSXXXXXXXXXXXXXXLISDAFDSLPLFTFSSVTG 690
           YL+LRYL              D V+P                     DSLPLFTF SV G
Sbjct: 58  YLLLRYLSRRCSERLHSD---DVVLPPVDSDRRFSSRRVSPEDLSLIDSLPLFTFGSVRG 114

Query: 689 NIAG--GDCAVCLSKFEPQDQLRLLPLCCHAFHVKCIDTWLTSNQTCPLCRSTIHPTDAD 516
             +   GDCAVCLSKFEP DQLRLLP+CCHAFH +CIDTWL SNQTCPLCRS I  T+AD
Sbjct: 115 RNSSSEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEAD 174

Query: 515 VLDKILAASGENVANSFRIEIGSISRRRTDSESGDNRRSYSVGSFDYIVDDGYELSRAST 336
            +  ILA++  N  +SFRIE+GS+SRRR+ SESG+ RRSYSVGSFDYIVD   E++ AST
Sbjct: 175 FMKAILAST--NAGDSFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHESEVTVAST 232

Query: 335 HRRGPSEATSV--DKESVGA-----AVAPPGENIAAEVAGTRSSWLRDYVD------XXX 195
           HRRG SE+++   DK+  GA     A  PPG + AAEVA  R SWL+DYVD         
Sbjct: 233 HRRGGSESSAAEKDKDDAGAQSNQLAPEPPGPSTAAEVASGR-SWLKDYVDRLSSTASLS 291

Query: 194 XXXXXXXXXXXXXXXXXXXXSEPVLAIG--DLESSRAGEEISELFRWLSGV 48
                                    ++G  DLE++R GEEISE+FRW SG+
Sbjct: 292 ISSRALSFRSSGRFFTGSSRRNETASVGEWDLEANRVGEEISEMFRWFSGI 342


>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  211 bits (537), Expect = 3e-52
 Identities = 118/228 (51%), Positives = 145/228 (63%), Gaps = 2/228 (0%)
 Frame = -2

Query: 728 DSLPLFTFSSVT--GNIAGGDCAVCLSKFEPQDQLRLLPLCCHAFHVKCIDTWLTSNQTC 555
           DSLPLFTFSS+      + GDCAVCLSKFEPQDQLRLLPLCCHAFH+ CIDTWL SNQTC
Sbjct: 98  DSLPLFTFSSIKRRSTSSSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTC 157

Query: 554 PLCRSTIHPTDADVLDKILAASGENVANSFRIEIGSISRRRTDSESGDNRRSYSVGSFDY 375
           PLCRS IH +D+D+L  +   +      SFR+EIGSISRR+T SE    R SYSVGSF+Y
Sbjct: 158 PLCRSPIHASDSDLLKSLSPDAAP--PESFRLEIGSISRRQTASEP---RSSYSVGSFEY 212

Query: 374 IVDDGYELSRASTHRRGPSEATSVDKESVGAAVAPPGENIAAEVAGTRSSWLRDYVDXXX 195
           +VD+  E++ + THRR  S     DKE  G   +    N+A++V+G   SWL+DYVD   
Sbjct: 213 VVDEDSEVTMSQTHRRSVS-----DKE--GGTHSRQDSNLASQVSGGGRSWLKDYVDRLS 265

Query: 194 XXXXXXXXXXXXXXXXXXXXSEPVLAIGDLESSRAGEEISELFRWLSG 51
                                   L   D+E++R GEEI+E+FRW SG
Sbjct: 266 SSLSFRSSGRLFTGSSRRSEIGS-LGDYDVEANRVGEEITEMFRWFSG 312


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  204 bits (519), Expect = 3e-50
 Identities = 120/245 (48%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
 Frame = -2

Query: 740 SDAFDSLPLFTFSSVT---GNIAGGDCAVCLSKFEPQDQLRLLPLCCHAFHVKCIDTWLT 570
           S   DSLP+F FSSVT    ++  GDCAVCLSKFEP+DQLRLLPLCCHAFH  CID WL 
Sbjct: 30  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 89

Query: 569 SNQTCPLCRSTIHPTDADVLDKILAASGENVA---NSFRIEIGSISRRRTD--SESGDNR 405
           SNQTCPLCRS +  +++D++ K LA  G N     NSFR+EIGSISRRR     ES +  
Sbjct: 90  SNQTCPLCRSPLFASESDLM-KSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQH 148

Query: 404 RSYSVGSFDYIVDD-GYELSRASTHRRGPSEATSVDKESVGAAVAPPG--ENIAAEVAGT 234
           R+YS+GSFDYIVDD   E+S ++ +R    +AT+    +      P     ++AA++   
Sbjct: 149 RTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAADIGND 208

Query: 233 RS-SWLRDYVD--XXXXXXXXXXXXXXXXXXXXXXXSEPVLAIGDLESSRAGEEISELFR 63
            S SWL+DYVD                             L + DLE++ AGEEISELFR
Sbjct: 209 GSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRRSEELTVMDLEANHAGEEISELFR 268

Query: 62  WLSGV 48
           WLSGV
Sbjct: 269 WLSGV 273


>ref|NP_191581.1| E3 ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
           gi|68565314|sp|Q9LY41.1|ATL4_ARATH RecName: Full=E3
           ubiquitin-protein ligase ATL4; AltName: Full=Protein
           ARABIDOPSIS TOXICOS EN LEVADURA 4; Short=Protein ATL4;
           AltName: Full=RING-H2 finger protein ATL4; AltName:
           Full=RING-H2 finger protein RHX1a
           gi|7576198|emb|CAB87859.1| RING-H2 zinc finger protein
           ATL4 [Arabidopsis thaliana] gi|66865934|gb|AAY57601.1|
           RING finger family protein [Arabidopsis thaliana]
           gi|114050661|gb|ABI49480.1| At3g60220 [Arabidopsis
           thaliana] gi|332646504|gb|AEE80025.1| E3
           ubiquitin-protein ligase ATL4 [Arabidopsis thaliana]
          Length = 334

 Score =  204 bits (519), Expect = 3e-50
 Identities = 120/245 (48%), Positives = 149/245 (60%), Gaps = 14/245 (5%)
 Frame = -2

Query: 740 SDAFDSLPLFTFSSVT---GNIAGGDCAVCLSKFEPQDQLRLLPLCCHAFHVKCIDTWLT 570
           S   DSLP+F FSSVT    ++  GDCAVCLSKFEP+DQLRLLPLCCHAFH  CID WL 
Sbjct: 91  SSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLV 150

Query: 569 SNQTCPLCRSTIHPTDADVLDKILAASGENVA---NSFRIEIGSISRRRTD--SESGDNR 405
           SNQTCPLCRS +  +++D++ K LA  G N     NSFR+EIGSISRRR     ES +  
Sbjct: 151 SNQTCPLCRSPLFASESDLM-KSLAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQH 209

Query: 404 RSYSVGSFDYIVDD-GYELSRASTHRRGPSEATSVDKESVGAAVAPPG--ENIAAEVAGT 234
           R+YS+GSFDYIVDD   E+S ++ +R    +AT+    +      P     ++AA++   
Sbjct: 210 RTYSIGSFDYIVDDVDSEISESNFNRGKQEDATTTTATATAVTTNPTSFEASLAADIGND 269

Query: 233 RS-SWLRDYVD--XXXXXXXXXXXXXXXXXXXXXXXSEPVLAIGDLESSRAGEEISELFR 63
            S SWL+DYVD                             L + DLE++ AGEEISELFR
Sbjct: 270 GSRSWLKDYVDRLSRGISSRAMSFRSSGRFFTGSSRRSEELTVMDLEANHAGEEISELFR 329

Query: 62  WLSGV 48
           WLSGV
Sbjct: 330 WLSGV 334


>ref|XP_004134365.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Cucumis sativus]
           gi|449487638|ref|XP_004157726.1| PREDICTED: E3
           ubiquitin-protein ligase ATL4-like [Cucumis sativus]
          Length = 339

 Score =  202 bits (513), Expect = 2e-49
 Identities = 114/237 (48%), Positives = 150/237 (63%), Gaps = 10/237 (4%)
 Frame = -2

Query: 728 DSLPLFTFSSVT--GNIAGGDCAVCLSKFEPQDQLRLLPLCCHAFHVKCIDTWLTSNQTC 555
           +SLPLF+FSSVT   + A  DCAVCLSKFE +DQLRLLPLCCHAFH +C+DTWL SNQ+C
Sbjct: 109 ESLPLFSFSSVTRRSSTAAADCAVCLSKFEAEDQLRLLPLCCHAFHAQCVDTWLQSNQSC 168

Query: 554 PLCRSTIHPTDADVLDKILA--ASGENVANSFRIEIGSISRRRTDSESGDNRRSYSVGSF 381
           PLCRS I  +++DV+   +A  A+     +SFR+EIGSISRR+  S+S + RRSYS+GSF
Sbjct: 169 PLCRSAIFASESDVMKASMASYAAEGRGGDSFRLEIGSISRRQAPSDSAEGRRSYSIGSF 228

Query: 380 DYIVDDGYELSRASTHRRGPSEATSVDKESVGAAVAPPG--ENIAAEVAGTRSSWLRDYV 207
           +Y V++  E++  + HRR  S     DKE + A ++      ++AAEV G+  +WL+DYV
Sbjct: 229 EYFVEEDSEVNFTNAHRRSVS-----DKEDIEAPISAVSTERSLAAEV-GSGRNWLKDYV 282

Query: 206 DXXXXXXXXXXXXXXXXXXXXXXXSE----PVLAIGDLESSRAGEEISELFRWLSGV 48
           D                       S      V    + E++R GEEISELFRW SGV
Sbjct: 283 DRLSNSVSSRALSFRGSGRFFTGSSRRSEVTVAGEWEQENNRVGEEISELFRWFSGV 339