BLASTX nr result

ID: Bupleurum21_contig00017709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017709
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y su...   209   5e-52
ref|XP_003535348.1| PREDICTED: nuclear transcription factor Y su...   208   7e-52
ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|2...   208   9e-52
gb|ABD32395.1| Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula]      207   1e-51
gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medica...   207   1e-51

>ref|XP_002280741.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Vitis
           vinifera]
          Length = 262

 Score =  209 bits (531), Expect = 5e-52
 Identities = 103/108 (95%), Positives = 105/108 (97%)
 Frame = +3

Query: 309 NFWATQYQEIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTM 488
           NFW  QYQEIEQ TDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELT+
Sbjct: 84  NFWQNQYQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTL 143

Query: 489 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAA 632
           RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+
Sbjct: 144 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAS 191



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
 Frame = +2

Query: 5   MDQQAHGQPPNMGVVGTSAEMQYGMAPYQANQMMGTAAPAPGGLLQS------AQAPGQL 166
           MDQ  HGQPP MG+VG++A+M YG+ P+Q NQM+GT+ P   G +QS        +P QL
Sbjct: 1   MDQPGHGQPPAMGMVGSAAQMPYGIPPFQPNQMVGTSGPGTVGSIQSPTQPAGISSPAQL 60

Query: 167 AQHQL 181
           AQHQL
Sbjct: 61  AQHQL 65


>ref|XP_003535348.1| PREDICTED: nuclear transcription factor Y subunit C-9-like [Glycine
           max]
          Length = 264

 Score =  208 bits (530), Expect = 7e-52
 Identities = 103/107 (96%), Positives = 106/107 (99%)
 Frame = +3

Query: 312 FWATQYQEIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTMR 491
           FWA QYQEIE+VTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELT+R
Sbjct: 87  FWANQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLR 146

Query: 492 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAA 632
           SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+
Sbjct: 147 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAS 193


>ref|XP_002311837.1| predicted protein [Populus trichocarpa] gi|222851657|gb|EEE89204.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  208 bits (529), Expect = 9e-52
 Identities = 102/107 (95%), Positives = 105/107 (98%)
 Frame = +3

Query: 312 FWATQYQEIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTMR 491
           FWA QYQEIEQ TDFKNHSLPLARIKKIMKADEDVRMISAEAP+IFARACEMFILELT+R
Sbjct: 83  FWANQYQEIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPIIFARACEMFILELTLR 142

Query: 492 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAA 632
           SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+
Sbjct: 143 SWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAS 189



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/66 (50%), Positives = 40/66 (60%), Gaps = 7/66 (10%)
 Frame = +2

Query: 5   MDQQAHGQPPNMGVVGTSAEMQYGMAPYQANQMMGTAAPAPGGLLQSAQAP-------GQ 163
           MDQQ H QPP +G+VG++A + YG+  YQ NQMMG   P+  G LQS   P         
Sbjct: 1   MDQQGHVQPPAVGMVGSTAPVPYGIPSYQHNQMMG---PSATGSLQSPTQPAVLTASSAH 57

Query: 164 LAQHQL 181
           LAQHQL
Sbjct: 58  LAQHQL 63


>gb|ABD32395.1| Histone-fold/TFIID-TAF/NF-Y [Medicago truncatula]
          Length = 249

 Score =  207 bits (528), Expect = 1e-51
 Identities = 102/108 (94%), Positives = 107/108 (99%)
 Frame = +3

Query: 309 NFWATQYQEIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTM 488
           +FW+ QYQEIE+VTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELT+
Sbjct: 71  SFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTL 130

Query: 489 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAA 632
           RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+
Sbjct: 131 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAS 178


>gb|AFK49671.1| nuclear transcription factor Y subunit C2 [Medicago truncatula]
          Length = 260

 Score =  207 bits (528), Expect = 1e-51
 Identities = 102/108 (94%), Positives = 107/108 (99%)
 Frame = +3

Query: 309 NFWATQYQEIEQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTM 488
           +FW+ QYQEIE+VTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELT+
Sbjct: 82  SFWSNQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTL 141

Query: 489 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAA 632
           RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLA+
Sbjct: 142 RSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLAS 189



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 31/63 (49%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
 Frame = +2

Query: 5   MDQQAHGQPPNMGVVGTSAEMQYGMAPYQANQMM---GTAAPAPGGLLQSAQAPG-QLAQ 172
           MD Q H Q P MGVVG+ ++M YG  PYQ+NQM    G+   + GG+  + Q  G QL Q
Sbjct: 1   MDHQGHNQNPQMGVVGSGSQMPYGSNPYQSNQMTGAPGSVVTSVGGMQSTGQPAGAQLGQ 60

Query: 173 HQL 181
           HQL
Sbjct: 61  HQL 63


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