BLASTX nr result

ID: Bupleurum21_contig00017707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017707
         (989 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|2...   207   2e-51
ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|2...   202   1e-49
ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [...   200   5e-49
ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [...   185   1e-44
ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [...   181   3e-43

>ref|XP_002309341.1| predicted protein [Populus trichocarpa] gi|222855317|gb|EEE92864.1|
           predicted protein [Populus trichocarpa]
          Length = 722

 Score =  207 bits (528), Expect = 2e-51
 Identities = 111/190 (58%), Positives = 140/190 (73%), Gaps = 5/190 (2%)
 Frame = +3

Query: 435 EISIPEQKANDIVVEEKKIQPSNVRPTSISTKVKKQAPPVVHRPKIVSNPSKAKP---IP 605
           E S PE+K   +V E KK++  N R    S+ V KQ PPV+ R  +  N +KA     IP
Sbjct: 387 EFSTPEEKPKKVVSEVKKVERFNNRTAPTSSDVNKQPPPVLRRATLYQNLAKAAASPSIP 446

Query: 606 VADEYQSVP--KRHNKLQSLVDLVMWRDASKSAFIFGLGTFVIISSSYTTDLNISVISVV 779
           VA+EYQS    +RH+KLQ+LVDLVMWRD S+SA  FGLGTF+IISSSY+ DLN+S ISV+
Sbjct: 447 VANEYQSFKETRRHSKLQNLVDLVMWRDLSRSALAFGLGTFIIISSSYSKDLNVSFISVI 506

Query: 780 SYVGLIYLAVTFIFRSIIYRGVIYEDETIQEYGYGVEEAMWLLKLILPYINEFLLKLRAL 959
           SY+GL+YLA  F++RS+I RGVI  D+  + Y  G  EA+WLLKL+LPY+NE LLK+RAL
Sbjct: 507 SYLGLVYLATIFLYRSLICRGVIDIDDG-RSYVVGEGEAIWLLKLVLPYLNECLLKIRAL 565

Query: 960 FSGDPATTMK 989
           FSGDP+TTMK
Sbjct: 566 FSGDPSTTMK 575


>ref|XP_002324545.1| predicted protein [Populus trichocarpa] gi|222865979|gb|EEF03110.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  202 bits (514), Expect = 1e-49
 Identities = 113/199 (56%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
 Frame = +3

Query: 414 KKKHDLKEISIPEQKANDIVVEEKKIQPS--NVRPTSISTKVKKQAPPVVHRPKIVSNPS 587
           KK  D+KEI+I E+K        KK++ +  N R    S+ V KQ PPV+ R  +  N +
Sbjct: 194 KKSLDIKEINIAEEKP-------KKVEKNQFNNRTAPASSIVNKQPPPVIKRATLYQNLA 246

Query: 588 KAKP---IPVADEYQSVP--KRHNKLQSLVDLVMWRDASKSAFIFGLGTFVIISSSYTTD 752
           KA P   IPVA+EYQ+    +RH+KLQ+LVDLVMWRD S+S   FG+GTF+IISSSYT D
Sbjct: 247 KAAPNPSIPVANEYQNFKETRRHSKLQNLVDLVMWRDVSRSTLAFGMGTFIIISSSYTKD 306

Query: 753 LNISVISVVSYVGLIYLAVTFIFRSIIYRGVIYEDETIQEYGYGVEEAMWLLKLILPYIN 932
           LN+S ISV+SY+GL+YLA  F++RS+I RGVI  D+    Y  G  EA+WLLKL+LPY+N
Sbjct: 307 LNVSFISVMSYLGLVYLATIFLYRSLICRGVIDIDDD-GSYVLGEGEAIWLLKLVLPYLN 365

Query: 933 EFLLKLRALFSGDPATTMK 989
           E LLK+RALFSGDPATTMK
Sbjct: 366 ECLLKIRALFSGDPATTMK 384


>ref|XP_003518216.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 608

 Score =  200 bits (508), Expect = 5e-49
 Identities = 109/216 (50%), Positives = 139/216 (64%), Gaps = 24/216 (11%)
 Frame = +3

Query: 414 KKKHDLKEISIPEQKA------------------------NDIVVEEKKIQPSNVRPTSI 521
           K   D+KEIS+PE K                           +V   ++    N RP SI
Sbjct: 249 KGSFDVKEISVPESKVVNEPERKEVVNVPAKQKIVNEPEPKKVVTTNRQFHQKNERPVSI 308

Query: 522 STKVKKQAPPVVHRPKIVSNPSKAKPIPVADEYQSVPKRHNKLQSLVDLVMWRDASKSAF 701
              VK  +PP+     I  N SKA  IP A+EY   P+  NKLQSLVDL+MWR+ S+SAF
Sbjct: 309 PIAVKP-SPPIRKLSTIHQNFSKADSIPKAEEYYCFPQSQNKLQSLVDLIMWREVSRSAF 367

Query: 702 IFGLGTFVIISSSYTTDLNISVISVVSYVGLIYLAVTFIFRSIIYRGVIYEDETIQEYGY 881
           IFG+GTF I+SSSY  D+N+S+ISV+SY+GL+YLAV F++RS+I RGVI  D+T   Y  
Sbjct: 368 IFGIGTFTIVSSSYAKDINLSLISVMSYIGLVYLAVIFLYRSLICRGVIDVDDT--NYVL 425

Query: 882 GVEEAMWLLKLILPYINEFLLKLRALFSGDPATTMK 989
           G EEA+W+L+LILPY+NEFL KLRA+FSGDP TT+K
Sbjct: 426 GEEEAIWVLRLILPYLNEFLSKLRAMFSGDPGTTIK 461


>ref|XP_004146687.1| PREDICTED: reticulon-like protein B21-like [Cucumis sativus]
          Length = 555

 Score =  185 bits (470), Expect = 1e-44
 Identities = 102/192 (53%), Positives = 130/192 (67%)
 Frame = +3

Query: 414 KKKHDLKEISIPEQKANDIVVEEKKIQPSNVRPTSISTKVKKQAPPVVHRPKIVSNPSKA 593
           K+  D+KEI++PE K   IV E KK      +P                       P  +
Sbjct: 239 KESFDIKEINLPEPKK--IVNEVKKFHQIYEKPV----------------------PHSS 274

Query: 594 KPIPVADEYQSVPKRHNKLQSLVDLVMWRDASKSAFIFGLGTFVIISSSYTTDLNISVIS 773
           KP   + EY +  ++ NKLQSLVDL+MW++ S+SAF+FG+G+FVIISSSYT D+NIS IS
Sbjct: 275 KPTYTSKEYHNFQEKSNKLQSLVDLIMWKEVSRSAFVFGIGSFVIISSSYTNDINISFIS 334

Query: 774 VVSYVGLIYLAVTFIFRSIIYRGVIYEDETIQEYGYGVEEAMWLLKLILPYINEFLLKLR 953
           VVSYVGL YLA TF++RSIIYRG I + E ++    G EEA+W+LKL+LPY+NEFLLK+R
Sbjct: 335 VVSYVGLFYLAATFLYRSIIYRGAI-DMENVRNV-VGEEEAIWVLKLLLPYLNEFLLKVR 392

Query: 954 ALFSGDPATTMK 989
           ALF GDPATTMK
Sbjct: 393 ALFCGDPATTMK 404


>ref|XP_003550690.1| PREDICTED: reticulon-like protein B21-like [Glycine max]
          Length = 589

 Score =  181 bits (458), Expect = 3e-43
 Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 13/205 (6%)
 Frame = +3

Query: 414 KKKHDLKEISIPEQKANDIVVEEKKIQPSNVRPTSISTKVKKQAPPVVHRPKIVS----- 578
           K   D+KEIS+PE K   +V E ++ +  NV   +   K+  +  P     K+VS     
Sbjct: 250 KGSFDVKEISVPESK---VVNETERKEVVNV---AAKQKIVNEPEP----KKVVSTNRQF 299

Query: 579 NPSKAKPI--------PVADEYQSVPKRHNKLQSLVDLVMWRDASKSAFIFGLGTFVIIS 734
           +    +P+        P A+EY S P+  NKLQSLVDL+MWRD S+SAFIFG+GTF I+ 
Sbjct: 300 HQKNERPVLIGLYYSVPKAEEYCSFPQSQNKLQSLVDLIMWRDISRSAFIFGIGTFAIVL 359

Query: 735 SSYTTDLNISVISVVSYVGLIYLAVTFIFRSIIYRGVIYEDETIQEYGYGVEEAMWLLKL 914
           SSY  D+N+S+ISV+SY+GL+YLAV F++RS+I RGVI  ++T   Y    EEA+W+LKL
Sbjct: 360 SSYAKDINLSLISVMSYIGLVYLAVIFLYRSLICRGVIDVEDT--NYVLREEEAIWVLKL 417

Query: 915 ILPYINEFLLKLRALFSGDPATTMK 989
           ILPY+NEFL KLRA+FSGDP TT+K
Sbjct: 418 ILPYLNEFLSKLRAMFSGDPGTTIK 442


Top