BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017696
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [...    86   3e-15
gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [...    86   3e-15
ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|2...    85   6e-15
ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|2...    85   6e-15
gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]     85   8e-15

>gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 487

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 18/157 (11%)
 Frame = -3

Query: 519 HYEIQNQYGRKYALGNNCRKGDECPYSHEGPVT---------------RDPMEAINMDLP 385
           +Y+    +   + +   C +G ECPY HE P T                DP+    ++  
Sbjct: 154 YYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAMKLLNKA 213

Query: 384 NTMLPLEPLDDKSNRILCVG--DIRFNQQDIRDVVLAHGEIETIEMEPAIGCVVVTYTTR 211
             M  LEP DD+S R L VG  D R ++QD+RD   AHGEIE+I+M    GC  VTYTTR
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273

Query: 210 EGXXXXXXXXXXXLV-NGMRPRVMWYKLQPNPHPDSD 103
           EG           LV  G+R +++W + Q  P PD++
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQA-PKPDTE 309


>gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
          Length = 462

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 57/157 (36%), Positives = 79/157 (50%), Gaps = 18/157 (11%)
 Frame = -3

Query: 519 HYEIQNQYGRKYALGNNCRKGDECPYSHEGPVT---------------RDPMEAINMDLP 385
           +Y+    +   + +   C +G ECPY HE P T                DP+    ++  
Sbjct: 154 YYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVAMKLLNKA 213

Query: 384 NTMLPLEPLDDKSNRILCVG--DIRFNQQDIRDVVLAHGEIETIEMEPAIGCVVVTYTTR 211
             M  LEP DD+S R L VG  D R ++QD+RD   AHGEIE+I+M    GC  VTYTTR
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTR 273

Query: 210 EGXXXXXXXXXXXLV-NGMRPRVMWYKLQPNPHPDSD 103
           EG           LV  G+R +++W + Q  P PD++
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQA-PKPDTE 309


>ref|XP_002314129.1| predicted protein [Populus trichocarpa] gi|222850537|gb|EEE88084.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
 Frame = -3

Query: 468 CRKGDECPYSHEGPVT---------------RDPMEAINMDLPNTMLPLEPLDDKSNRIL 334
           C +G ECPY HE P+T                DP+    ++    M  LEP +D+S + L
Sbjct: 171 CTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGDMPSLEPPEDESIKTL 230

Query: 333 CVG--DIRFNQQDIRDVVLAHGEIETIEMEPAIGCVVVTYTTREGXXXXXXXXXXXLV-N 163
            VG  D R N+QD+RD   AHGEIE+I+M P      VTYTTREG           LV  
Sbjct: 231 YVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIK 290

Query: 162 GMRPRVMWYKLQPNPHPDSD 103
           G+R ++MW + Q  P P+S+
Sbjct: 291 GLRLKLMWGRPQA-PKPESE 309


>ref|XP_002314127.1| predicted protein [Populus trichocarpa] gi|222850535|gb|EEE88082.1|
           predicted protein [Populus trichocarpa]
          Length = 531

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
 Frame = -3

Query: 468 CRKGDECPYSHEGPVT---------------RDPMEAINMDLPNTMLPLEPLDDKSNRIL 334
           C +G ECPY HE P+T                DP+    ++    M  LEP +D+S + L
Sbjct: 171 CTRGAECPYRHEMPITGELSQQNIKDRYYGVNDPVAMKLLNKAGDMPSLEPPEDESIKTL 230

Query: 333 CVG--DIRFNQQDIRDVVLAHGEIETIEMEPAIGCVVVTYTTREGXXXXXXXXXXXLV-N 163
            VG  D R N+QD+RD   AHGEIE+I+M P      VTYTTREG           LV  
Sbjct: 231 YVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLVIK 290

Query: 162 GMRPRVMWYKLQPNPHPDSD 103
           G+R ++MW + Q  P P+S+
Sbjct: 291 GLRLKLMWGRPQA-PKPESE 309


>gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
          Length = 479

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 57/157 (36%), Positives = 78/157 (49%), Gaps = 18/157 (11%)
 Frame = -3

Query: 519 HYEIQNQYGRKYALGNNCRKGDECPYSHEGPVT---------------RDPMEAINMDLP 385
           +Y+    +   + +   C +G ECPY HE P T                DP+    ++  
Sbjct: 154 YYKRNRAHVCSFYIRGQCTRGLECPYRHEMPETGELSQQNIKDRYYGVNDPVALKLLNKA 213

Query: 384 NTMLPLEPLDDKSNRILCVG--DIRFNQQDIRDVVLAHGEIETIEMEPAIGCVVVTYTTR 211
             M  LEP DD+S R L VG  D R  +QD+RD   AHGEIE+I+M    GC  VTYTTR
Sbjct: 214 GEMPSLEPPDDESIRTLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTR 273

Query: 210 EGXXXXXXXXXXXLV-NGMRPRVMWYKLQPNPHPDSD 103
           EG           LV  G+R +++W + Q  P P+S+
Sbjct: 274 EGAVKAAEELANKLVIKGLRLKLLWGRPQV-PKPESE 309