BLASTX nr result

ID: Bupleurum21_contig00017690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017690
         (1675 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   745   0.0  
ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|2...   736   0.0  
ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   734   0.0  
ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   734   0.0  
ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putativ...   714   0.0  

>ref|XP_002278373.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32 [Vitis vinifera]
          Length = 750

 Score =  745 bits (1923), Expect = 0.0
 Identities = 371/502 (73%), Positives = 426/502 (84%)
 Frame = -3

Query: 1508 PKSKKFKLQKRLTEAEEIKLLESWIDFGKPDXXXXXXXXXXXXXNAPIGKIDEKTYSQYT 1329
            P+ ++F  QKRLTE +EI+LLESWI+FGKPD             NAPIG+ID  ++S Y 
Sbjct: 8    PQKRQFVKQKRLTELQEIELLESWIEFGKPDSGSNPLSLAPPPSNAPIGRIDGDSFSPYA 67

Query: 1328 GCKKFNQLPLSQKTKDGLSAAKYTKMTDIQRASLPHSLAGRDIRGAAKTGSGKTLAFIIP 1149
            GC +F++LPLSQKT DGL  ++Y  MT+IQRASLPHSL GRDI GAAKTGSGKTLAF+IP
Sbjct: 68   GCDRFDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIP 127

Query: 1148 VLEKLYKQRWGPQDGVGAIIISPTRELASQLFEVLKSVGKYHGFSAGLLIGGRKDVDMEK 969
            VLEKLY+ RWGP+DGVG+IIISPTREL  QLF+VLKSVGKYH FSAGLLIGGRKDV MEK
Sbjct: 128  VLEKLYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYHSFSAGLLIGGRKDVGMEK 187

Query: 968  EHVNDLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDLGFKKAVDAIVSQLPK 789
            EHVN+LNILVCTPGRLLQHMDETPNF+CSQLQVLVLDEADRILD+GFKKA++AI+SQLPK
Sbjct: 188  EHVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKALNAIISQLPK 247

Query: 788  RRQTFLFSATQTKSSKHLERLSMKDPEYISVHEEAETATPSRLHQTAMIVPLDQKLNMLW 609
             RQT LFSATQTKS + L RLS+KDPEY+SVHEE+ TATP+RL QTAMIVPLDQKL+MLW
Sbjct: 248  HRQTLLFSATQTKSVQDLARLSLKDPEYLSVHEESATATPNRLQQTAMIVPLDQKLDMLW 307

Query: 608  SFVRAHLNSRILVFLSTCKQVKFVFEAFKKLRPGIPLKCLHGRMKQESRMGIYTQFCENR 429
            SF++AHLNSRILVF ++ KQVKFVFEAFKKLRPGIPLKCLHG+M Q+ RMGIY+QFCE+R
Sbjct: 308  SFIKAHLNSRILVFFASRKQVKFVFEAFKKLRPGIPLKCLHGKMNQQKRMGIYSQFCESR 367

Query: 428  SVLFSTDVASRGLDFDKVVDWVVQVDCPDDVASYIHRVGRTARYLSAGRSVLFLLPTXXX 249
            SVLFSTDVASRGLDF+K VDWV+QVDCP+DVA+YIHRVGRTARY S GRSVLFL+P+   
Sbjct: 368  SVLFSTDVASRGLDFNKGVDWVIQVDCPEDVAAYIHRVGRTARYHSEGRSVLFLVPSETE 427

Query: 248  XXXXXXXXKIPVQFIKANTKRXXXXXXXXXXXXVKYKDLQYLAQRAFITYLRSIYKQRDK 69
                    KIP+  IKANTKR            VKY D++YLAQ+AFITYLRSI+KQ DK
Sbjct: 428  MLKKLEVAKIPIHLIKANTKRLQQVSRLLQDLLVKYDDMRYLAQKAFITYLRSIHKQGDK 487

Query: 68   EVFDVMKLPIDEFSASMGLPMT 3
            EVFDVM+LP++EFS S+GLPMT
Sbjct: 488  EVFDVMRLPVEEFSVSLGLPMT 509


>ref|XP_002319844.1| predicted protein [Populus trichocarpa] gi|222858220|gb|EEE95767.1|
            predicted protein [Populus trichocarpa]
          Length = 766

 Score =  736 bits (1901), Expect = 0.0
 Identities = 371/507 (73%), Positives = 422/507 (83%)
 Frame = -3

Query: 1523 LKMKAPKSKKFKLQKRLTEAEEIKLLESWIDFGKPDXXXXXXXXXXXXXNAPIGKIDEKT 1344
            ++   PKSK+ +  +   E EEI  L  WID  KPD             +APIG + +  
Sbjct: 1    MRKSKPKSKQTRRDRHEAEQEEISKLNQWIDSQKPDSGTNPLSLPPLPKDAPIGPLQDDK 60

Query: 1343 YSQYTGCKKFNQLPLSQKTKDGLSAAKYTKMTDIQRASLPHSLAGRDIRGAAKTGSGKTL 1164
            +S+Y+G   F +LPLS++T+DGL  A ++KMTDIQRASLPHSL GRDI GAAKTGSGKTL
Sbjct: 61   FSRYSGATMFKELPLSKRTQDGLKRANFSKMTDIQRASLPHSLCGRDILGAAKTGSGKTL 120

Query: 1163 AFIIPVLEKLYKQRWGPQDGVGAIIISPTRELASQLFEVLKSVGKYHGFSAGLLIGGRKD 984
            AFIIP+LEKLYK+RWG +DGVG IIISPTRELA QLF+VLK+VGK+H FSAGLLIGGRK+
Sbjct: 121  AFIIPILEKLYKERWGSEDGVGGIIISPTRELAGQLFDVLKTVGKFHNFSAGLLIGGRKE 180

Query: 983  VDMEKEHVNDLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDLGFKKAVDAIV 804
            V+MEKEHVN L+ILVCTPGRLLQHMDETPNF+CSQLQVLVLDEADRILD+GFKK ++AIV
Sbjct: 181  VEMEKEHVNALSILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIV 240

Query: 803  SQLPKRRQTFLFSATQTKSSKHLERLSMKDPEYISVHEEAETATPSRLHQTAMIVPLDQK 624
            +QLPK RQT LFSATQTKS + L RLS+KDPEYISVHE+AETATPSRL QTAMIVPL+QK
Sbjct: 241  AQLPKHRQTLLFSATQTKSIQDLARLSLKDPEYISVHEDAETATPSRLQQTAMIVPLEQK 300

Query: 623  LNMLWSFVRAHLNSRILVFLSTCKQVKFVFEAFKKLRPGIPLKCLHGRMKQESRMGIYTQ 444
            L+MLWSFV+AHLNS+ILVFLS+CKQVKFVFEAFKKLRPGIPLKCLHGRMKQE RMGIY+Q
Sbjct: 301  LDMLWSFVKAHLNSKILVFLSSCKQVKFVFEAFKKLRPGIPLKCLHGRMKQEKRMGIYSQ 360

Query: 443  FCENRSVLFSTDVASRGLDFDKVVDWVVQVDCPDDVASYIHRVGRTARYLSAGRSVLFLL 264
            FCE+ SVLFSTDVASRGLDF+K VDWVVQVDCPDDVASYIHRVGRTARYL+ GRSVLFL+
Sbjct: 361  FCESHSVLFSTDVASRGLDFNKAVDWVVQVDCPDDVASYIHRVGRTARYLAGGRSVLFLM 420

Query: 263  PTXXXXXXXXXXXKIPVQFIKANTKRXXXXXXXXXXXXVKYKDLQYLAQRAFITYLRSIY 84
            P+           KIPVQFIKANTKR            VKY D+Q LAQRAFITYLRSI+
Sbjct: 421  PSEMKMLEKLQTAKIPVQFIKANTKRLQPVSGLLSALLVKYPDMQQLAQRAFITYLRSIH 480

Query: 83   KQRDKEVFDVMKLPIDEFSASMGLPMT 3
             Q+DKEVFDV+KL I+EFSAS+GLPMT
Sbjct: 481  IQKDKEVFDVLKLSIEEFSASLGLPMT 507


>ref|XP_004164669.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  734 bits (1895), Expect = 0.0
 Identities = 366/501 (73%), Positives = 422/501 (84%)
 Frame = -3

Query: 1505 KSKKFKLQKRLTEAEEIKLLESWIDFGKPDXXXXXXXXXXXXXNAPIGKIDEKTYSQYTG 1326
            KSK    QKRL+E EEIKLL SWI+  KPD             NAPIG+ID+ TYS+Y G
Sbjct: 6    KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPPPNAPIGRIDDDTYSRYAG 65

Query: 1325 CKKFNQLPLSQKTKDGLSAAKYTKMTDIQRASLPHSLAGRDIRGAAKTGSGKTLAFIIPV 1146
              +F+QLP+S KTKDGL  A++  MTDIQ+ASLPH+L GRDI GAAKTGSGKTLAF+IPV
Sbjct: 66   ATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIPV 125

Query: 1145 LEKLYKQRWGPQDGVGAIIISPTRELASQLFEVLKSVGKYHGFSAGLLIGGRKDVDMEKE 966
            LEKLY++RWGP+ GVG+IIISPTREL +QLF+VLK+VGK+H FSAGLLIGGRKDV+ EKE
Sbjct: 126  LEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDVNTEKE 185

Query: 965  HVNDLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDLGFKKAVDAIVSQLPKR 786
            HVN+LNILVCTPGRLLQHMDETPNF+CSQLQVLVLDEADRILD+GFKK ++AI+SQLPK 
Sbjct: 186  HVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKH 245

Query: 785  RQTFLFSATQTKSSKHLERLSMKDPEYISVHEEAETATPSRLHQTAMIVPLDQKLNMLWS 606
            RQTFLFSATQTKS + L RLS+KDPEY+SVHEE+ TATP+ L QTAM+VPL+QKL+MLWS
Sbjct: 246  RQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKLDMLWS 305

Query: 605  FVRAHLNSRILVFLSTCKQVKFVFEAFKKLRPGIPLKCLHGRMKQESRMGIYTQFCENRS 426
            F++AHLNS+ILVFLS+CKQVKFVFE FKKLRPGIPLKCLHGRMKQ+ RMGIY++FCE RS
Sbjct: 306  FIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDKRMGIYSEFCEKRS 365

Query: 425  VLFSTDVASRGLDFDKVVDWVVQVDCPDDVASYIHRVGRTARYLSAGRSVLFLLPTXXXX 246
            VLFSTDVASRGLDF+K VDWVVQVDCP+DVASYIHRVGRTARY S G+SVLF++P+    
Sbjct: 366  VLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGKSVLFIMPSEMKM 425

Query: 245  XXXXXXXKIPVQFIKANTKRXXXXXXXXXXXXVKYKDLQYLAQRAFITYLRSIYKQRDKE 66
                   K+P+Q IKANTKR            VKY + Q LAQRAFITYLRSI+ Q+DKE
Sbjct: 426  LEQLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIHIQKDKE 485

Query: 65   VFDVMKLPIDEFSASMGLPMT 3
            +FDVMKL IDEFSAS+GLPMT
Sbjct: 486  IFDVMKLSIDEFSASLGLPMT 506


>ref|XP_004152924.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 32-like [Cucumis
            sativus]
          Length = 734

 Score =  734 bits (1895), Expect = 0.0
 Identities = 366/501 (73%), Positives = 422/501 (84%)
 Frame = -3

Query: 1505 KSKKFKLQKRLTEAEEIKLLESWIDFGKPDXXXXXXXXXXXXXNAPIGKIDEKTYSQYTG 1326
            KSK    QKRL+E EEIKLL SWI+  KPD             NAPIG+ID+ TYS+Y G
Sbjct: 6    KSKNSGKQKRLSENEEIKLLNSWIESQKPDSGSNPMSLPPPLPNAPIGRIDDDTYSRYAG 65

Query: 1325 CKKFNQLPLSQKTKDGLSAAKYTKMTDIQRASLPHSLAGRDIRGAAKTGSGKTLAFIIPV 1146
              +F+QLP+S KTKDGL  A++  MTDIQ+ASLPH+L GRDI GAAKTGSGKTLAF+IPV
Sbjct: 66   ATRFDQLPISSKTKDGLRKAEFIDMTDIQKASLPHALCGRDILGAAKTGSGKTLAFLIPV 125

Query: 1145 LEKLYKQRWGPQDGVGAIIISPTRELASQLFEVLKSVGKYHGFSAGLLIGGRKDVDMEKE 966
            LEKLY++RWGP+ GVG+IIISPTREL +QLF+VLK+VGK+H FSAGLLIGGRKDV+ EKE
Sbjct: 126  LEKLYRERWGPEFGVGSIIISPTRELGAQLFDVLKAVGKFHNFSAGLLIGGRKDVNTEKE 185

Query: 965  HVNDLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDLGFKKAVDAIVSQLPKR 786
            HVN+LNILVCTPGRLLQHMDETPNF+CSQLQVLVLDEADRILD+GFKK ++AI+SQLPK 
Sbjct: 186  HVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAIISQLPKH 245

Query: 785  RQTFLFSATQTKSSKHLERLSMKDPEYISVHEEAETATPSRLHQTAMIVPLDQKLNMLWS 606
            RQTFLFSATQTKS + L RLS+KDPEY+SVHEE+ TATP+ L QTAM+VPL+QKL+MLWS
Sbjct: 246  RQTFLFSATQTKSVQDLARLSLKDPEYLSVHEESTTATPNSLQQTAMVVPLEQKLDMLWS 305

Query: 605  FVRAHLNSRILVFLSTCKQVKFVFEAFKKLRPGIPLKCLHGRMKQESRMGIYTQFCENRS 426
            F++AHLNS+ILVFLS+CKQVKFVFE FKKLRPGIPLKCLHGRMKQ+ RMGIY++FCE RS
Sbjct: 306  FIKAHLNSKILVFLSSCKQVKFVFETFKKLRPGIPLKCLHGRMKQDKRMGIYSEFCEKRS 365

Query: 425  VLFSTDVASRGLDFDKVVDWVVQVDCPDDVASYIHRVGRTARYLSAGRSVLFLLPTXXXX 246
            VLFSTDVASRGLDF+K VDWVVQVDCP+DVASYIHRVGRTARY S G+SVLF++P+    
Sbjct: 366  VLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYHSGGKSVLFIMPSEMKM 425

Query: 245  XXXXXXXKIPVQFIKANTKRXXXXXXXXXXXXVKYKDLQYLAQRAFITYLRSIYKQRDKE 66
                   K+P+Q IKANTKR            VKY + Q LAQRAFITYLRSI+ Q+DKE
Sbjct: 426  LEQLESAKVPIQLIKANTKRLQPVSGLLSALLVKYPNFQQLAQRAFITYLRSIHIQKDKE 485

Query: 65   VFDVMKLPIDEFSASMGLPMT 3
            +FDVMKL IDEFSAS+GLPMT
Sbjct: 486  IFDVMKLSIDEFSASLGLPMT 506


>ref|XP_002522952.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223537764|gb|EEF39382.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 753

 Score =  714 bits (1844), Expect = 0.0
 Identities = 361/507 (71%), Positives = 419/507 (82%), Gaps = 2/507 (0%)
 Frame = -3

Query: 1517 MKAPKSK--KFKLQKRLTEAEEIKLLESWIDFGKPDXXXXXXXXXXXXXNAPIGKIDEKT 1344
            M+ PKSK  + + Q+R  E EEI LL  WI+  KPD              +PIG++ + T
Sbjct: 1    MRKPKSKSREKRKQRRNLEQEEIALLNDWIESQKPDSGSNPLSLPEN---SPIGRLPDGT 57

Query: 1343 YSQYTGCKKFNQLPLSQKTKDGLSAAKYTKMTDIQRASLPHSLAGRDIRGAAKTGSGKTL 1164
            +S+Y GC KF +LPLS++TKDGL+ A Y  MT+IQRASLPHSL GRDI GAAKTGSGKTL
Sbjct: 58   FSRYAGCTKFKELPLSKRTKDGLTKAGYITMTEIQRASLPHSLCGRDILGAAKTGSGKTL 117

Query: 1163 AFIIPVLEKLYKQRWGPQDGVGAIIISPTRELASQLFEVLKSVGKYHGFSAGLLIGGRKD 984
            AF+IPVLEKL+++RWGPQDGVG+IIISPTRELA QLF+VL++VGK+H FSAGLLIGGRKD
Sbjct: 118  AFVIPVLEKLHRERWGPQDGVGSIIISPTRELAGQLFDVLRNVGKFHNFSAGLLIGGRKD 177

Query: 983  VDMEKEHVNDLNILVCTPGRLLQHMDETPNFECSQLQVLVLDEADRILDLGFKKAVDAIV 804
            +D EKE VN+LNILVCTPGRLLQHMDETPNF+CSQLQVLVLDEADRILD+GFKK ++AI+
Sbjct: 178  IDTEKESVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDVGFKKTLNAII 237

Query: 803  SQLPKRRQTFLFSATQTKSSKHLERLSMKDPEYISVHEEAETATPSRLHQTAMIVPLDQK 624
            SQ+PK RQT LFSATQTKS + L RLS+KDPEY+ VHE+++TATP+RL QTAM+VPL+QK
Sbjct: 238  SQIPKYRQTLLFSATQTKSVQDLARLSLKDPEYVGVHEKSDTATPNRLQQTAMVVPLEQK 297

Query: 623  LNMLWSFVRAHLNSRILVFLSTCKQVKFVFEAFKKLRPGIPLKCLHGRMKQESRMGIYTQ 444
            L+MLWSF++AHLNS ILVFLS+CKQVKFV+EAFKKL PGIPLKCLHGRMKQ  RM IY+Q
Sbjct: 298  LDMLWSFIKAHLNSNILVFLSSCKQVKFVYEAFKKLHPGIPLKCLHGRMKQGKRMVIYSQ 357

Query: 443  FCENRSVLFSTDVASRGLDFDKVVDWVVQVDCPDDVASYIHRVGRTARYLSAGRSVLFLL 264
            FCE RSVLFSTDVA+RGLDF+K VDWVVQVDCP+DVASYIHRVGRTARY S GRSVLFLL
Sbjct: 358  FCEQRSVLFSTDVAARGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYQSGGRSVLFLL 417

Query: 263  PTXXXXXXXXXXXKIPVQFIKANTKRXXXXXXXXXXXXVKYKDLQYLAQRAFITYLRSIY 84
            P+           K+P+QFIKAN KR            VK +DLQ LA RAFITYLRSIY
Sbjct: 418  PSEMKMLEKLQEAKVPIQFIKANAKRLQPVSGLLSALLVKNEDLQKLAIRAFITYLRSIY 477

Query: 83   KQRDKEVFDVMKLPIDEFSASMGLPMT 3
             Q+DKEVFDVMKL IDE+SAS+GLPMT
Sbjct: 478  IQKDKEVFDVMKLSIDEYSASLGLPMT 504


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