BLASTX nr result

ID: Bupleurum21_contig00017680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017680
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234492.1| nuclear matrix protein 1 [Solanum lycopersic...   267   1e-69
ref|XP_002264476.1| PREDICTED: uncharacterized protein LOC100243...   256   3e-66
ref|XP_002523988.1| conserved hypothetical protein [Ricinus comm...   254   1e-65
ref|XP_004133936.1| PREDICTED: uncharacterized protein LOC101219...   252   4e-65
ref|XP_002319224.1| predicted protein [Populus trichocarpa] gi|1...   248   1e-63

>ref|NP_001234492.1| nuclear matrix protein 1 [Solanum lycopersicum]
           gi|15077144|gb|AAK83083.1|AF289255_1 nuclear matrix
           protein 1 [Solanum lycopersicum]
          Length = 331

 Score =  267 bits (683), Expect = 1e-69
 Identities = 132/155 (85%), Positives = 145/155 (93%)
 Frame = +3

Query: 3   EKQLSDQSNRMSSLQEMVDDLASKHEYNPEEDYVEVELKLRKHLESFLETAKSFNMIYTK 182
           EKQLSDQSNR+ SLQEMVDDLASKH YNP+E+YV+VE KLR HLESFL+TA++FN IYTK
Sbjct: 174 EKQLSDQSNRLLSLQEMVDDLASKHPYNPDEEYVDVEAKLRGHLESFLDTARTFNTIYTK 233

Query: 183 EIRPWTHMMEVPQLHGFGPAADRLLEAYKMLLKFLGNLKNLRDSHAAIAVGASETVAGEP 362
           EIRPWTHMMEVPQLHGFGPAA+RLLEAYKML KFLGNLKNLRDSHAA+A G+SETVAGEP
Sbjct: 234 EIRPWTHMMEVPQLHGFGPAANRLLEAYKMLWKFLGNLKNLRDSHAAVAAGSSETVAGEP 293

Query: 363 SSVARIISECEAALTYLNRDLSILSASIAREQGEE 467
           SSV RIISECE ALT LNRDL+ILSASIARE+GE+
Sbjct: 294 SSVTRIISECETALTLLNRDLAILSASIARERGED 328


>ref|XP_002264476.1| PREDICTED: uncharacterized protein LOC100243653 [Vitis vinifera]
          Length = 332

 Score =  256 bits (654), Expect = 3e-66
 Identities = 125/157 (79%), Positives = 144/157 (91%)
 Frame = +3

Query: 3   EKQLSDQSNRMSSLQEMVDDLASKHEYNPEEDYVEVELKLRKHLESFLETAKSFNMIYTK 182
           E +LS+QS  + +LQ+ VDDLASKH YNP+E+Y EVE +LR HLESFLETA+SFN+IYTK
Sbjct: 175 ETKLSEQSKLLLNLQQKVDDLASKHAYNPDEEYEEVESQLRAHLESFLETARSFNVIYTK 234

Query: 183 EIRPWTHMMEVPQLHGFGPAADRLLEAYKMLLKFLGNLKNLRDSHAAIAVGASETVAGEP 362
           EIRPWTHMMEVPQLHGFGPAA+RLLEAYKMLLKFLGNL+NLRDSHAA+AVG+S+T+AG+P
Sbjct: 235 EIRPWTHMMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAAVAVGSSDTIAGQP 294

Query: 363 SSVARIISECEAALTYLNRDLSILSASIAREQGEETT 473
           S V RIISECE+ALT+LNRDL ILSASIAREQGEE T
Sbjct: 295 SPVTRIISECESALTFLNRDLGILSASIAREQGEEFT 331


>ref|XP_002523988.1| conserved hypothetical protein [Ricinus communis]
           gi|223536715|gb|EEF38356.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  254 bits (648), Expect = 1e-65
 Identities = 123/158 (77%), Positives = 142/158 (89%)
 Frame = +3

Query: 3   EKQLSDQSNRMSSLQEMVDDLASKHEYNPEEDYVEVELKLRKHLESFLETAKSFNMIYTK 182
           E +LS+QS  + +LQ+ VDDLASKH YNP+E+Y EVE +LR HLESFLETA+ FN+IYTK
Sbjct: 174 ETKLSEQSKVLLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARQFNVIYTK 233

Query: 183 EIRPWTHMMEVPQLHGFGPAADRLLEAYKMLLKFLGNLKNLRDSHAAIAVGASETVAGEP 362
           EIRPWTHMMEVPQLHGFGPAA+RLLEAYKMLLKFLGNL+NLRDSHAA+AVG+SET+AGEP
Sbjct: 234 EIRPWTHMMEVPQLHGFGPAANRLLEAYKMLLKFLGNLRNLRDSHAALAVGSSETIAGEP 293

Query: 363 SSVARIISECEAALTYLNRDLSILSASIAREQGEETTY 476
           SSV RIISECE+ALT+LNRDL +LSASIAREQG    +
Sbjct: 294 SSVTRIISECESALTFLNRDLGVLSASIAREQGNVVNF 331


>ref|XP_004133936.1| PREDICTED: uncharacterized protein LOC101219290 [Cucumis sativus]
           gi|449480017|ref|XP_004155776.1| PREDICTED:
           uncharacterized protein LOC101227549 [Cucumis sativus]
          Length = 334

 Score =  252 bits (644), Expect = 4e-65
 Identities = 125/160 (78%), Positives = 144/160 (90%), Gaps = 3/160 (1%)
 Frame = +3

Query: 3   EKQLSDQSNRMSSLQEMVDDLASKHEYNPEEDYVEVELKLRKHLESFLETAKSFNMIYTK 182
           E +L++QS  + +LQ+ VDDLASKH YNP+E+Y EVE +LR HLESFLETA+SFN+IYTK
Sbjct: 174 ETKLAEQSKILLNLQQKVDDLASKHAYNPDEEYTEVESQLRAHLESFLETARSFNIIYTK 233

Query: 183 EIRPWTHMMEVPQLHGFGPAADRLLEAYKMLLKFLGNLKNLRDSHAAIAVGASETVAGEP 362
           EIRPWTHMMEVPQLHGFGPAA+RLLEAY MLLKFLGNL+NLRDSHAA+A+G+SET+AGEP
Sbjct: 234 EIRPWTHMMEVPQLHGFGPAANRLLEAYNMLLKFLGNLRNLRDSHAALAIGSSETIAGEP 293

Query: 363 SSVARIISECEAALTYLNRDLSILSASIARE---QGEETT 473
           SSV RIISECE+ALT+LNRDL ILSASIARE   QGEE T
Sbjct: 294 SSVTRIISECESALTFLNRDLGILSASIARERGQQGEEVT 333


>ref|XP_002319224.1| predicted protein [Populus trichocarpa] gi|118483669|gb|ABK93728.1|
           unknown [Populus trichocarpa]
           gi|222857600|gb|EEE95147.1| predicted protein [Populus
           trichocarpa]
          Length = 331

 Score =  248 bits (632), Expect = 1e-63
 Identities = 121/157 (77%), Positives = 140/157 (89%)
 Frame = +3

Query: 3   EKQLSDQSNRMSSLQEMVDDLASKHEYNPEEDYVEVELKLRKHLESFLETAKSFNMIYTK 182
           E +L++QS  + SLQ+ +DDLASKH YNP+E+Y EVE  LR HLESFLETA+SFN+IYTK
Sbjct: 174 ETKLAEQSKILQSLQQKIDDLASKHAYNPDEEYSEVESHLRAHLESFLETARSFNVIYTK 233

Query: 183 EIRPWTHMMEVPQLHGFGPAADRLLEAYKMLLKFLGNLKNLRDSHAAIAVGASETVAGEP 362
           EIRPWTHMMEVPQLHGFGPAA+RLLEAYKML KFLGNL+NLRDSHAA+AVG+SET AGEP
Sbjct: 234 EIRPWTHMMEVPQLHGFGPAANRLLEAYKMLWKFLGNLRNLRDSHAALAVGSSETKAGEP 293

Query: 363 SSVARIISECEAALTYLNRDLSILSASIAREQGEETT 473
           SSV RIISECE+ALT+LNRDL ILSASI+RE+G   +
Sbjct: 294 SSVTRIISECESALTFLNRDLGILSASISREKGNNAS 330


Top