BLASTX nr result

ID: Bupleurum21_contig00017654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017654
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...   126   2e-27
dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]         119   3e-25
ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glyc...   119   3e-25
ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate re...   118   4e-25
ref|XP_003528563.1| PREDICTED: glutamate receptor 2.8-like [Glyc...   116   2e-24

>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score =  126 bits (317), Expect = 2e-27
 Identities = 75/169 (44%), Positives = 99/169 (58%), Gaps = 16/169 (9%)
 Frame = -2

Query: 461 SWDLWLTVVLAAIFIGVVVRMMERREN------PQGQLGMXXXXXXXXXXXPERKMVGNN 300
           S +LWLT  +A I  G+VV ++E REN      P  QLG              R+ V NN
Sbjct: 484 SLELWLTTGIAFILTGLVVWVLEHRENKVFRGKPAQQLGTTLWFSFSTLFFAHREKVVNN 543

Query: 299 WARFVLVVWLFMAYVLMQSYTANLSSILTVGQLS-TSADIP------VCAGYQKDTFVNG 141
           W RFVL++W+F+  ++ QSYTA+L+SILTV +L  T  D+          G+QKD+FV  
Sbjct: 544 WTRFVLIIWIFVVLIISQSYTASLASILTVKRLQPTFVDVKEIRKNGYFVGHQKDSFVKD 603

Query: 140 ML---QHLNIPLLRNYSTMEEYDEALSKGCKKGGVDAIYDEVPYINLFL 3
            L    + N  +LR YST EEY +ALS+G   GGV AI+ E+PYI LFL
Sbjct: 604 FLVKQLNFNDTMLREYSTPEEYHDALSRGTHNGGVAAIFAEIPYIKLFL 652


>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score =  119 bits (298), Expect = 3e-25
 Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 15/166 (9%)
 Frame = -2

Query: 455  DLWLTVVLAAIFIGVVVRMMERRENPQ------GQLGMXXXXXXXXXXXPERKMVGNNWA 294
            +LW+T     IFIG VV ++E R N +       Q+GM             R+ V +N+ 
Sbjct: 595  ELWITTGGFFIFIGFVVWVLEHRVNKEFRGPKHKQVGMIFWFSFSTLVFAHRERVTSNFT 654

Query: 293  RFVLVVWLFMAYVLMQSYTANLSSILTVGQLSTS-ADIPVC------AGYQKDTFVNGML 135
            RFVL+VW+F+  VL  SYTANL+S+LTV QL  S  D+          GYQ+ +FV  +L
Sbjct: 655  RFVLIVWVFVVLVLTSSYTANLTSMLTVQQLQPSITDLNDLIKNGEYVGYQEGSFVKDIL 714

Query: 134  QHLNIPL--LRNYSTMEEYDEALSKGCKKGGVDAIYDEVPYINLFL 3
            +H+       R+YST+EEY +ALS+G K GGV AI DE+PY+ LFL
Sbjct: 715  KHMKFDSSKFRSYSTLEEYSDALSRGSKNGGVGAIVDELPYLRLFL 760


>ref|XP_003542285.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
          Length = 482

 Score =  119 bits (298), Expect = 3e-25
 Identities = 74/174 (42%), Positives = 99/174 (56%), Gaps = 21/174 (12%)
 Frame = -2

Query: 461 SWDLWLTVVLAAIFIGVVVRMMERREN-PQGQLGMXXXXXXXXXXXP----------ERK 315
           SWDLWL++V+ + FIGV + +MER  N P  Q G+                      ER+
Sbjct: 167 SWDLWLSIVIISTFIGVSILVMERNVNAPTDQEGLPNRKKLSPATILWFPISQAILPERQ 226

Query: 314 MVGNNWARFVLVVWLFMAYVLMQSYTANLSSILTVGQLSTS----ADI---PVCAGYQKD 156
           +V  N +RFVL++WL +A+VLMQSYTANL+SILT+ QL  S     D+       GYQ  
Sbjct: 227 VVAKNCSRFVLMIWLLLAFVLMQSYTANLTSILTLDQLGPSFFNVNDLRKGGYYVGYQSG 286

Query: 155 TFVNGMLQH---LNIPLLRNYSTMEEYDEALSKGCKKGGVDAIYDEVPYINLFL 3
           +FV  +L      +   LR YS   EY  AL  G ++GGV AI+DEVPY+ +FL
Sbjct: 287 SFVKDVLVQQFKFDTSKLRPYSNSAEYHNALKTGSQRGGVAAIFDEVPYLKVFL 340


>ref|XP_003528564.1| PREDICTED: LOW QUALITY PROTEIN: glutamate receptor 2.9-like
           [Glycine max]
          Length = 823

 Score =  118 bits (296), Expect = 4e-25
 Identities = 68/169 (40%), Positives = 92/169 (54%), Gaps = 16/169 (9%)
 Frame = -2

Query: 461 SWDLWLTVVLAAIFIGVVVRMMERREN------PQGQLGMXXXXXXXXXXXPERKMVGNN 300
           +WDLWLT   A IF G +V   E R N      P+ Q+GM             R+ V N 
Sbjct: 489 NWDLWLTTGAAFIFTGFIVWFFEHRSNTEFRGTPKNQIGMALWFSFSTLVFAHREKVENK 548

Query: 299 WARFVLVVWLFMAYVLMQSYTANLSSILTVGQLSTS-ADIP------VCAGYQKDTFVNG 141
           W+RFVL++W F+  ++ QSYTA+L+SILTV +L     D+          GY KD+FV G
Sbjct: 549 WSRFVLIIWFFVVLIITQSYTASLASILTVQKLQPQFMDVEEIKTNNFFVGYHKDSFVKG 608

Query: 140 MLQH---LNIPLLRNYSTMEEYDEALSKGCKKGGVDAIYDEVPYINLFL 3
           +L      N   L+ Y   + Y +ALS G   GGV A++DE+ +INLFL
Sbjct: 609 LLIEKLGFNESKLKGYHGPKAYQQALSLGSNNGGVAAVFDEIVFINLFL 657


>ref|XP_003528563.1| PREDICTED: glutamate receptor 2.8-like [Glycine max]
          Length = 818

 Score =  116 bits (290), Expect = 2e-24
 Identities = 69/170 (40%), Positives = 95/170 (55%), Gaps = 17/170 (10%)
 Frame = -2

Query: 461  SWDLWLTVVLAAIFIGVVVRMMERREN-------PQGQLGMXXXXXXXXXXXPERKMVGN 303
            SW LWLT   A + IG VV  +E R N       P+ QLG+             R+ + +
Sbjct: 544  SWGLWLTTGAALVLIGFVVWFLEHRSNNTAFRGTPKQQLGIVFWFSFSTLVFAHRERLVS 603

Query: 302  NWARFVLVVWLFMAYVLMQSYTANLSSILTVGQLSTS-ADIPVC------AGYQKDTFVN 144
            NW+R +L++W+F+  ++ QSYTA+L+S+LT+  L     DI          GYQ  +FV 
Sbjct: 604  NWSRGLLIIWIFVVLIITQSYTASLTSMLTIESLQPEFIDIKEIKRNNYFVGYQNQSFVK 663

Query: 143  GMLQH---LNIPLLRNYSTMEEYDEALSKGCKKGGVDAIYDEVPYINLFL 3
             +L +    N   L+ Y+T EEY EALSKG   GGV AI+DE PYIN+FL
Sbjct: 664  TILINELGFNESQLKAYNTPEEYHEALSKGTNNGGVAAIFDESPYINVFL 713


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