BLASTX nr result

ID: Bupleurum21_contig00017653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017653
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]         134   1e-29
gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana...   127   7e-28
ref|XP_002324493.1| glutamate-gated kainate-type ion channel rec...   127   1e-27
ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucu...   124   8e-27
ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucu...   124   8e-27

>dbj|BAL15048.1| glutamate receptor 2.1 [Solanum lycopersicum]
          Length = 965

 Score =  134 bits (336), Expect = 1e-29
 Identities = 73/134 (54%), Positives = 95/134 (70%), Gaps = 9/134 (6%)
 Frame = -1

Query: 375  LAFPERKMVGNNWARFVLVVWLFMAYILMQSYTANLSSILTVGQLRPS-TDIPNC----- 214
            L F  R+ V +N+ RFVL+VW+F+  +L  SYTANL+S+LTV QL+PS TD+ +      
Sbjct: 641  LVFAHRERVTSNFTRFVLIVWVFVVLVLTSSYTANLTSMLTVQQLQPSITDLNDLIKNGE 700

Query: 213  -VGYQEYSFVEDMLKNMNIPLR--RAYSTMEDYDRALSQGCKNGGVDAIFDEIPYINLFL 43
             VGYQE SFV+D+LK+M       R+YST+E+Y  ALS+G KNGGV AI DE+PY+ LFL
Sbjct: 701  YVGYQEGSFVKDILKHMKFDSSKFRSYSTLEEYSDALSRGSKNGGVGAIVDELPYLRLFL 760

Query: 42   HKYGSKYRKVGTTY 1
            +KY  KY  VG TY
Sbjct: 761  NKYCRKYIMVGPTY 774


>gb|AAP03877.1| Avr9/Cf-9 rapidly elicited protein 141 [Nicotiana tabacum]
          Length = 952

 Score =  127 bits (320), Expect = 7e-28
 Identities = 70/134 (52%), Positives = 93/134 (69%), Gaps = 9/134 (6%)
 Frame = -1

Query: 375  LAFPERKMVGNNWARFVLVVWLFMAYILMQSYTANLSSILTVGQLRPS-TDIPNC----- 214
            L F  ++ V +N  RFV++VW+F+  +L  SYTA+L+S+LTV QL+P+ TD+ +      
Sbjct: 628  LVFAHKERVTSNLTRFVVIVWVFVVLVLTSSYTASLTSMLTVQQLQPTITDLNDLIKNGE 687

Query: 213  -VGYQEYSFVEDMLKNMNIPLR--RAYSTMEDYDRALSQGCKNGGVDAIFDEIPYINLFL 43
             VGYQ+ SFVED+LK M       R YST+EDY+ ALS+G KNGGV AI DE+PY+ LFL
Sbjct: 688  YVGYQKGSFVEDILKRMKFESSKFRNYSTLEDYNDALSRGSKNGGVGAIVDELPYLRLFL 747

Query: 42   HKYGSKYRKVGTTY 1
            +KY  KY  VG TY
Sbjct: 748  NKYCRKYVMVGPTY 761


>ref|XP_002324493.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222865927|gb|EEF03058.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 853

 Score =  127 bits (318), Expect = 1e-27
 Identities = 71/135 (52%), Positives = 91/135 (67%), Gaps = 10/135 (7%)
 Frame = -1

Query: 375 LAFPERKMVGNNWARFVLVVWLFMAYILMQSYTANLSSILTVGQLRPS-TDIPNC----- 214
           L F  R+ V NNW RFVL++W+F+  I+ QSYTA+L+SILTV +L+P+  D+        
Sbjct: 532 LFFAHREKVVNNWTRFVLIIWIFVVLIISQSYTASLASILTVKRLQPTFVDVKEIRKNGY 591

Query: 213 -VGYQEYSFVEDMLK---NMNIPLRRAYSTMEDYDRALSQGCKNGGVDAIFDEIPYINLF 46
            VG+Q+ SFV+D L    N N  + R YST E+Y  ALS+G  NGGV AIF EIPYI LF
Sbjct: 592 FVGHQKDSFVKDFLVKQLNFNDTMLREYSTPEEYHDALSRGTHNGGVAAIFAEIPYIKLF 651

Query: 45  LHKYGSKYRKVGTTY 1
           L KY SK++ VG TY
Sbjct: 652 LAKYCSKFQMVGPTY 666


>ref|XP_004169420.1| PREDICTED: glutamate receptor 2.2-like [Cucumis sativus]
          Length = 829

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 10/136 (7%)
 Frame = -1

Query: 378 ALAFPERKMVGNNWARFVLVVWLFMAYILMQSYTANLSSILTVGQLRPSTDIPN------ 217
           +L  PER++V N  +RFVLVVWLF+A++LMQSYTA+LSSIL   QL+P     N      
Sbjct: 549 SLVLPERQIVTNTRSRFVLVVWLFLAFVLMQSYTASLSSILMSDQLQPKYFSVNELISKG 608

Query: 216 -CVGYQEYSFVEDML---KNMNIPLRRAYSTMEDYDRALSQGCKNGGVDAIFDEIPYINL 49
             VGYQE SF + ML      N    ++Y+ +E++ +ALS+G +NGGV AIFDEIPY+ +
Sbjct: 609 YYVGYQEGSFTKSMLIEQLKFNESKLKSYANVEEFHKALSKGSQNGGVAAIFDEIPYLKV 668

Query: 48  FLHKYGSKYRKVGTTY 1
           FL KYGS + + G  Y
Sbjct: 669 FLTKYGSDFIRAGPIY 684


>ref|XP_004146350.1| PREDICTED: glutamate receptor 2.7-like [Cucumis sativus]
          Length = 859

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/136 (50%), Positives = 91/136 (66%), Gaps = 10/136 (7%)
 Frame = -1

Query: 378 ALAFPERKMVGNNWARFVLVVWLFMAYILMQSYTANLSSILTVGQLRPSTDIPN------ 217
           +L  PER++V N  +RFVLVVWLF+A++LMQSYTA+LSSIL   QL+P     N      
Sbjct: 575 SLVLPERQIVTNTRSRFVLVVWLFLAFVLMQSYTASLSSILMSDQLQPKYFSVNELISKG 634

Query: 216 -CVGYQEYSFVEDML---KNMNIPLRRAYSTMEDYDRALSQGCKNGGVDAIFDEIPYINL 49
             VGYQE SF + ML      N    ++Y+ +E++ +ALS+G +NGGV AIFDEIPY+ +
Sbjct: 635 YYVGYQEGSFTKSMLIEQLKFNESKLKSYANVEEFHKALSKGSQNGGVAAIFDEIPYLKV 694

Query: 48  FLHKYGSKYRKVGTTY 1
           FL KYGS + + G  Y
Sbjct: 695 FLTKYGSDFIRAGPIY 710


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