BLASTX nr result

ID: Bupleurum21_contig00017646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017646
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21387.3| unnamed protein product [Vitis vinifera]               70   2e-10
ref|XP_002283045.2| PREDICTED: floral homeotic protein APETALA 2...    70   2e-10
gb|ACG63707.1| transcription factor APETALA2 [Citrus trifoliata]       69   3e-10
ref|XP_002534399.1| Floral homeotic protein APETALA2, putative [...    63   3e-08
gb|AEL29576.1| APETALA2 [Betula platyphylla]                           62   5e-08

>emb|CBI21387.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = -3

Query: 332 FMKAGEAPQGHHMFAPQHNS-NYQMQM--QFXXXXXXXXXXXSTTRDYHNQWQSGGPQVI 162
           F +AGE  Q  H+  PQ +S NYQ+Q                 +    H QWQSG PQ+ 
Sbjct: 399 FRRAGET-QMLHILPPQLSSPNYQIQFPSSSNGGRIAVNGGDLSLATNHQQWQSGPPQLF 457

Query: 161 ASAAASSGFPQQVVRSDSNWLHTNGFHSFMRP 66
           A+AAASSGFP Q++R +  W   NGFHS +RP
Sbjct: 458 ATAAASSGFPPQMIRPNQQWPQKNGFHSLIRP 489


>ref|XP_002283045.2| PREDICTED: floral homeotic protein APETALA 2 [Vitis vinifera]
           gi|226377504|gb|ACO52508.1| transcription factor
           APETALA2 [Vitis vinifera]
          Length = 511

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = -3

Query: 332 FMKAGEAPQGHHMFAPQHNS-NYQMQM--QFXXXXXXXXXXXSTTRDYHNQWQSGGPQVI 162
           F +AGE  Q  H+  PQ +S NYQ+Q                 +    H QWQSG PQ+ 
Sbjct: 420 FRRAGET-QMLHILPPQLSSPNYQIQFPSSSNGGRIAVNGGDLSLATNHQQWQSGPPQLF 478

Query: 161 ASAAASSGFPQQVVRSDSNWLHTNGFHSFMRP 66
           A+AAASSGFP Q++R +  W   NGFHS +RP
Sbjct: 479 ATAAASSGFPPQMIRPNQQWPQKNGFHSLIRP 510


>gb|ACG63707.1| transcription factor APETALA2 [Citrus trifoliata]
          Length = 512

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 44/94 (46%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
 Frame = -3

Query: 332 FMKAGEAPQGHHMFAPQHN-SNYQMQMQFXXXXXXXXXXXS---TTRDYHNQWQSGGPQV 165
           F ++GE+    HM  PQ N SNYQ +                  +T D+H QWQS GP +
Sbjct: 420 FRRSGESHL-LHMVPPQCNQSNYQTRQLTPGSSKRGRIGNELSLSTNDHHQQWQS-GPHM 477

Query: 164 IASAAASSGFPQQVVRSDS-NWLHTNGFHSFMRP 66
            A+AAASSGFPQQ+  S S NWL  NGFHS +RP
Sbjct: 478 FATAAASSGFPQQIRSSHSQNWLQNNGFHSLVRP 511


>ref|XP_002534399.1| Floral homeotic protein APETALA2, putative [Ricinus communis]
           gi|223525368|gb|EEF27984.1| Floral homeotic protein
           APETALA2, putative [Ricinus communis]
          Length = 368

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 44/100 (44%), Positives = 54/100 (54%), Gaps = 11/100 (11%)
 Frame = -3

Query: 332 FMKAGEAPQGHHMFAPQHNSNYQMQMQFXXXXXXXXXXXSTT-----RDYHN-QWQSGGP 171
           F +AGEA Q  H F+P    NY +Q              S +       YH  QWQSG P
Sbjct: 274 FRRAGEA-QVFHGFSP----NYLIQFPSSSNGGRIGSDLSLSPSDNHHQYHQRQWQSGPP 328

Query: 170 -----QVIASAAASSGFPQQVVRSDSNWLHTNGFHSFMRP 66
                Q++A+AAASSGFPQQ+ R+  NWL  NGFHS +RP
Sbjct: 329 PPHHHQLVANAAASSGFPQQI-RTPQNWLQKNGFHSLLRP 367


>gb|AEL29576.1| APETALA2 [Betula platyphylla]
          Length = 517

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 38/77 (49%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
 Frame = -3

Query: 293 FAPQHNS-NYQMQMQFXXXXXXXXXXXSTTRDYHNQWQSGGPQVIASAAASSGFPQQVVR 117
           F PQ NS NY +Q Q            S +     QWQS  PQ+ A+AAASSGFP Q +R
Sbjct: 442 FLPQINSPNYHVQYQSSSNGGRIGGDLSLSMS-EQQWQSVPPQLFAAAAASSGFPPQ-IR 499

Query: 116 SDSNWLHTNGFHSFMRP 66
               W HTNGFHS MRP
Sbjct: 500 PPQYWPHTNGFHSLMRP 516


Top