BLASTX nr result

ID: Bupleurum21_contig00017634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017634
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-contain...    94   9e-18
emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]    92   4e-17
ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ric...    78   8e-13
ref|XP_003522361.1| PREDICTED: vegetative incompatibility protei...    75   4e-12
ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-contain...    74   9e-12

>ref|XP_003631291.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 427

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/86 (56%), Positives = 61/86 (70%), Gaps = 3/86 (3%)
 Frame = +2

Query: 143 LPTVPSLNTFSK---ETPTIHHQCISTLKGHPSYVFSLTLSGKHLYSGSSTGELCVWSRS 313
           LP+VPSL + S+   +  T HH CISTLKGH SYVFSL L+GK LYSGSS  E+ +WSR 
Sbjct: 54  LPSVPSLTSQSRRHEQAITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWSRD 113

Query: 314 PSNHQDSAENVVSSCKSAIKSIVVLG 391
           PS  + S +N V+    A+KS+VVLG
Sbjct: 114 PSRLETSNDNGVALGNGAVKSLVVLG 139


>emb|CAN76269.1| hypothetical protein VITISV_004097 [Vitis vinifera]
          Length = 507

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/86 (55%), Positives = 60/86 (69%), Gaps = 3/86 (3%)
 Frame = +2

Query: 143 LPTVPSLNTFSK---ETPTIHHQCISTLKGHPSYVFSLTLSGKHLYSGSSTGELCVWSRS 313
           LP+VPSL + S+   +  T HH CISTLKGH SYVFSL L+GK LYSGSS  E+ +W R 
Sbjct: 134 LPSVPSLTSQSRRHEQXITTHHHCISTLKGHSSYVFSLALAGKFLYSGSSDKEIRIWXRD 193

Query: 314 PSNHQDSAENVVSSCKSAIKSIVVLG 391
           PS  + S +N V+    A+KS+VVLG
Sbjct: 194 PSRLEXSNDNGVALGNGAVKSLVVLG 219


>ref|XP_002520212.1| F-box and wd40 domain protein, putative [Ricinus communis]
           gi|223540704|gb|EEF42267.1| F-box and wd40 domain
           protein, putative [Ricinus communis]
          Length = 431

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/88 (45%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = +2

Query: 143 LPTVPSL----NTFSKETPTIHHQCISTLKGHPSYVFSLTLSGKHLYSGSSTGELCVWSR 310
           LP+VPSL    +   ++T  +HH+C++ LKGH SY+FSL L G  LYSGSS  ++  WS+
Sbjct: 48  LPSVPSLTPPCSQQHEQTSVVHHRCLAILKGH-SYIFSLILDGNILYSGSSNSDIRSWSK 106

Query: 311 SPS-NHQDSAENVVSSCKSAIKSIVVLG 391
            PS +   +A N++++   A+KSIVV+G
Sbjct: 107 DPSADENPTALNIIATSNGAVKSIVVIG 134


>ref|XP_003522361.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Glycine
           max]
          Length = 418

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 8/89 (8%)
 Frame = +2

Query: 143 LPTVPSLNTFSKETP--TIHHQCISTLKGHPSYVFSLTLSGKHLYSGSSTGELCVWSRSP 316
           L +VPSLN     TP  +++H C++TLKGH SY+ SLTLSGK LY+GSS  E+  W+R P
Sbjct: 36  LISVPSLNHHHLHTPNPSVYHHCLTTLKGHTSYISSLTLSGKFLYTGSSDREIRSWNRIP 95

Query: 317 SN------HQDSAENVVSSCKSAIKSIVV 385
            N      + ++  + V + K A+KS+V+
Sbjct: 96  ENSSTDNSNNNNNNSTVLAGKGAVKSLVI 124


>ref|XP_002280390.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr3466-like [Vitis vinifera]
          Length = 409

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 42/93 (45%), Positives = 61/93 (65%), Gaps = 10/93 (10%)
 Frame = +2

Query: 143 LPTVPSLNTFSKE-------TPTIHHQCISTLKGHPSYVFSLTLSGKHLYSGSSTGELCV 301
           LP+VPSL + +++       T T HH C++T KGH SYV SL L+G  L+SGSS  E+ +
Sbjct: 36  LPSVPSLTSQTQQQQLYLPSTTTTHH-CVTTFKGHTSYVSSLALAGNFLFSGSSDKEIRL 94

Query: 302 WSR---SPSNHQDSAENVVSSCKSAIKSIVVLG 391
           W +   S  +H++ + NVV+  K A+KS+VVLG
Sbjct: 95  WEQNLNSELDHENISNNVVAVGKGAVKSMVVLG 127


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