BLASTX nr result

ID: Bupleurum21_contig00017613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017613
         (597 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631219.1| PREDICTED: uncharacterized protein LOC100266...    62   1e-07
emb|CAN72501.1| hypothetical protein VITISV_027275 [Vitis vinifera]    59   6e-07
ref|XP_002311466.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06

>ref|XP_003631219.1| PREDICTED: uncharacterized protein LOC100266460 [Vitis vinifera]
          Length = 165

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
 Frame = -3

Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEKNICTT-FLYNCLGRL 365
           SRK  K + LL+HY+YG  +EYQFSPS +PL  YR  T K    +++C+  FL  CLG  
Sbjct: 40  SRK-PKDFKLLKHYNYGNTEEYQFSPSSTPLFQYRGKTLKNGGARDMCSMFFLCRCLGSF 98

Query: 364 EDDYKVDGMCKYTMDYHMETLP-VDDA 287
             D   DG      DY +E LP V+DA
Sbjct: 99  RAD-PGDG------DYALEALPAVEDA 118


>emb|CAN72501.1| hypothetical protein VITISV_027275 [Vitis vinifera]
          Length = 179

 Score = 58.9 bits (141), Expect = 6e-07
 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
 Frame = -3

Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEKNICTT-FLYNCLGRL 365
           SRK  K + LL+HY+YG  +EYQFSPS +PL  YR  T K    +++C+  FL  CLG  
Sbjct: 40  SRK-PKBFKLLKHYNYGXTEEYQFSPSSTPLFQYRGKTLKNGXARDMCSMFFLCRCLGSF 98

Query: 364 EDDYKVDGMCKYTMDYHMET-LPVDDA 287
             D   DG      DY +E  L V+DA
Sbjct: 99  RAD-PGDG------DYALEALLAVEDA 118


>ref|XP_002311466.1| predicted protein [Populus trichocarpa] gi|222851286|gb|EEE88833.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
 Frame = -3

Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEK-NICTTFLY-NCLGR 368
           SRKLK R+  L+H++YG+++EY+FSPS +PLI Y    YK +S + N+ + F +  CLG 
Sbjct: 39  SRKLK-RFKPLKHHNYGFLEEYEFSPSSTPLIHYHGKQYKSRSYRDNLYSMFFHCRCLGS 97

Query: 367 LEDDYKVDGMCKYTMDYHMETLP 299
           L+    V  + +Y +   M+TLP
Sbjct: 98  LKAG--VGEVLEYRLS--MDTLP 116


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