BLASTX nr result
ID: Bupleurum21_contig00017613
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017613 (597 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631219.1| PREDICTED: uncharacterized protein LOC100266... 62 1e-07 emb|CAN72501.1| hypothetical protein VITISV_027275 [Vitis vinifera] 59 6e-07 ref|XP_002311466.1| predicted protein [Populus trichocarpa] gi|2... 57 2e-06 >ref|XP_003631219.1| PREDICTED: uncharacterized protein LOC100266460 [Vitis vinifera] Length = 165 Score = 61.6 bits (148), Expect = 1e-07 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 2/87 (2%) Frame = -3 Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEKNICTT-FLYNCLGRL 365 SRK K + LL+HY+YG +EYQFSPS +PL YR T K +++C+ FL CLG Sbjct: 40 SRK-PKDFKLLKHYNYGNTEEYQFSPSSTPLFQYRGKTLKNGGARDMCSMFFLCRCLGSF 98 Query: 364 EDDYKVDGMCKYTMDYHMETLP-VDDA 287 D DG DY +E LP V+DA Sbjct: 99 RAD-PGDG------DYALEALPAVEDA 118 >emb|CAN72501.1| hypothetical protein VITISV_027275 [Vitis vinifera] Length = 179 Score = 58.9 bits (141), Expect = 6e-07 Identities = 39/87 (44%), Positives = 50/87 (57%), Gaps = 2/87 (2%) Frame = -3 Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEKNICTT-FLYNCLGRL 365 SRK K + LL+HY+YG +EYQFSPS +PL YR T K +++C+ FL CLG Sbjct: 40 SRK-PKBFKLLKHYNYGXTEEYQFSPSSTPLFQYRGKTLKNGXARDMCSMFFLCRCLGSF 98 Query: 364 EDDYKVDGMCKYTMDYHMET-LPVDDA 287 D DG DY +E L V+DA Sbjct: 99 RAD-PGDG------DYALEALLAVEDA 118 >ref|XP_002311466.1| predicted protein [Populus trichocarpa] gi|222851286|gb|EEE88833.1| predicted protein [Populus trichocarpa] Length = 160 Score = 57.4 bits (137), Expect = 2e-06 Identities = 35/83 (42%), Positives = 54/83 (65%), Gaps = 2/83 (2%) Frame = -3 Query: 541 SRKLKKRYNLLQHYSYGYMKEYQFSPSHSPLICYRKNTYKKKSEK-NICTTFLY-NCLGR 368 SRKLK R+ L+H++YG+++EY+FSPS +PLI Y YK +S + N+ + F + CLG Sbjct: 39 SRKLK-RFKPLKHHNYGFLEEYEFSPSSTPLIHYHGKQYKSRSYRDNLYSMFFHCRCLGS 97 Query: 367 LEDDYKVDGMCKYTMDYHMETLP 299 L+ V + +Y + M+TLP Sbjct: 98 LKAG--VGEVLEYRLS--MDTLP 116