BLASTX nr result

ID: Bupleurum21_contig00017607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017607
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159789.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF...    94   5e-18
ref|XP_004138449.1| PREDICTED: protein YIPF1 homolog [Cucumis sa...    94   5e-18
ref|XP_002282343.2| PREDICTED: protein YIPF1 homolog [Vitis vini...    82   9e-15
emb|CBI31611.3| unnamed protein product [Vitis vinifera]               82   9e-15
ref|XP_002524232.1| Protein YIPF1, putative [Ricinus communis] g...    81   1e-14

>ref|XP_004159789.1| PREDICTED: LOW QUALITY PROTEIN: protein YIPF1 homolog [Cucumis
           sativus]
          Length = 270

 Score = 94.0 bits (232), Expect(2) = 5e-18
 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 22/93 (23%)
 Frame = +3

Query: 51  QYFNIDTDIVFEQIL----------------------LVWISTTLVFAIAFLGNCATYLM 164
           QYFN+DTDIV  +++                      LVWI+TTLVF +A LGNCATYLM
Sbjct: 82  QYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATYLM 141

Query: 165 QKRXXXXXXWTFDASYVNMAAGLVYGYALVVSM 263
           QKR      W+FD SY+N+AAG VYGYA+VV M
Sbjct: 142 QKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPM 174



 Score = 21.9 bits (45), Expect(2) = 5e-18
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 17  GVFSVSSYTQ 46
           GVFSVSSY+Q
Sbjct: 73  GVFSVSSYSQ 82


>ref|XP_004138449.1| PREDICTED: protein YIPF1 homolog [Cucumis sativus]
          Length = 270

 Score = 94.0 bits (232), Expect(2) = 5e-18
 Identities = 48/93 (51%), Positives = 58/93 (62%), Gaps = 22/93 (23%)
 Frame = +3

Query: 51  QYFNIDTDIVFEQIL----------------------LVWISTTLVFAIAFLGNCATYLM 164
           QYFN+DTDIV  +++                      LVWI+TTLVF +A LGNCATYLM
Sbjct: 82  QYFNVDTDIVMNRLISSLYPIGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATYLM 141

Query: 165 QKRXXXXXXWTFDASYVNMAAGLVYGYALVVSM 263
           QKR      W+FD SY+N+AAG VYGYA+VV M
Sbjct: 142 QKRSDQGAAWSFDVSYMNVAAGSVYGYAIVVPM 174



 Score = 21.9 bits (45), Expect(2) = 5e-18
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 17  GVFSVSSYTQ 46
           GVFSVSSY+Q
Sbjct: 73  GVFSVSSYSQ 82


>ref|XP_002282343.2| PREDICTED: protein YIPF1 homolog [Vitis vinifera]
          Length = 270

 Score = 81.6 bits (200), Expect(2) = 9e-15
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 22/91 (24%)
 Frame = +3

Query: 51  QYFNIDTDIVFEQIL----------------------LVWISTTLVFAIAFLGNCATYLM 164
           QYFN+DTD+V  +++                      L+W STTL+F IA LGNCATYL 
Sbjct: 82  QYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLIWTSTTLIFVIAALGNCATYLT 141

Query: 165 QKRXXXXXXWTFDASYVNMAAGLVYGYALVV 257
           +K+      W+FD  Y+N+AA  +YGYALVV
Sbjct: 142 KKQSSSSTTWSFDVGYLNLAACSIYGYALVV 172



 Score = 23.1 bits (48), Expect(2) = 9e-15
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 17  GVFSVSSYTQ 46
           GVFS+SSYTQ
Sbjct: 73  GVFSISSYTQ 82


>emb|CBI31611.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 81.6 bits (200), Expect(2) = 9e-15
 Identities = 40/91 (43%), Positives = 53/91 (58%), Gaps = 22/91 (24%)
 Frame = +3

Query: 51  QYFNIDTDIVFEQIL----------------------LVWISTTLVFAIAFLGNCATYLM 164
           QYFN+DTD+V  +++                      L+W STTL+F IA LGNCATYL 
Sbjct: 81  QYFNVDTDVVLNRLISSLHPIGGDFFSKIDANPDLYGLIWTSTTLIFVIAALGNCATYLT 140

Query: 165 QKRXXXXXXWTFDASYVNMAAGLVYGYALVV 257
           +K+      W+FD  Y+N+AA  +YGYALVV
Sbjct: 141 KKQSSSSTTWSFDVGYLNLAACSIYGYALVV 171



 Score = 23.1 bits (48), Expect(2) = 9e-15
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 17  GVFSVSSYTQ 46
           GVFS+SSYTQ
Sbjct: 72  GVFSISSYTQ 81


>ref|XP_002524232.1| Protein YIPF1, putative [Ricinus communis]
           gi|223536509|gb|EEF38156.1| Protein YIPF1, putative
           [Ricinus communis]
          Length = 271

 Score = 81.3 bits (199), Expect(2) = 1e-14
 Identities = 41/93 (44%), Positives = 52/93 (55%), Gaps = 22/93 (23%)
 Frame = +3

Query: 51  QYFNIDTDIVFEQIL----------------------LVWISTTLVFAIAFLGNCATYLM 164
           QYFN+DTDIV  +I+                      L+WISTTL+  +A LGNCATYLM
Sbjct: 83  QYFNVDTDIVINRIMSSFYPIGGDFFRKIDAHPDLYGLIWISTTLICLLAGLGNCATYLM 142

Query: 165 QKRXXXXXXWTFDASYVNMAAGLVYGYALVVSM 263
           QK       W FD  YVN+A   +YGYA++V +
Sbjct: 143 QKHTESSASWNFDVGYVNVATFAIYGYAILVPL 175



 Score = 23.1 bits (48), Expect(2) = 1e-14
 Identities = 9/10 (90%), Positives = 10/10 (100%)
 Frame = +2

Query: 17  GVFSVSSYTQ 46
           GVFS+SSYTQ
Sbjct: 74  GVFSISSYTQ 83


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