BLASTX nr result

ID: Bupleurum21_contig00017603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017603
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308153.1| f-box family protein [Populus trichocarpa] g...   145   8e-33
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              144   2e-32
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   144   2e-32
ref|XP_003604971.1| Dof zinc finger protein [Medicago truncatula...   142   4e-32
ref|XP_002879686.1| Dof-type zinc finger domain-containing prote...   142   5e-32

>ref|XP_002308153.1| f-box family protein [Populus trichocarpa]
           gi|222854129|gb|EEE91676.1| f-box family protein
           [Populus trichocarpa]
          Length = 326

 Score =  145 bits (365), Expect = 8e-33
 Identities = 95/223 (42%), Positives = 108/223 (48%), Gaps = 19/223 (8%)
 Frame = -1

Query: 617 HGGGDQAVSSRPGSMVERARMANIALPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 438
           HG G  A S RPGSM +RARMANI LPEPALKCPRCESTNTKFCYFNNYSL+QPRHFCKT
Sbjct: 45  HGSGG-AGSIRPGSMADRARMANIPLPEPALKCPRCESTNTKFCYFNNYSLTQPRHFCKT 103

Query: 437 CRRYWTRGGALRNVPVXXXXXXXXXXXXXXXXXXXSEPAXXXXXXXXXXXXXXXNYAATP 258
           CRRYWTRGGALR+VPV                     P                + + T 
Sbjct: 104 CRRYWTRGGALRSVPV----GGGCRRNKRSKESSSKSPISGYRQTGSCSSSTVSSNSGTS 159

Query: 257 TTNILQGLITSHVPQRCELDSNH-------------GQISARIIATTSEMNFDIG----- 132
            T    GL     P R     +H             G +S  ++   S++NF +G     
Sbjct: 160 DT---FGLGPQVPPMRFMAPLHHHTEFASGNIGLNYGALSKTLVGGASDLNFQMGSALAS 216

Query: 131 -GYNNXXXXXXXXXXXXXLEQWPRMHHAPQLPNFLGGFDPSIS 6
            G                 +QW RM    QLP FLGG D S S
Sbjct: 217 AGLGGNGGAGGSLLSMGGFDQW-RMQQGQQLP-FLGGLDSSAS 257


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  144 bits (362), Expect = 2e-32
 Identities = 66/76 (86%), Positives = 68/76 (89%)
 Frame = -1

Query: 617 HGGGDQAVSSRPGSMVERARMANIALPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 438
           HGGG    S RPGSM +RAR+ANI LPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCKT
Sbjct: 43  HGGGGTG-SIRPGSMADRARLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 101

Query: 437 CRRYWTRGGALRNVPV 390
           CRRYWTRGGALRNVPV
Sbjct: 102 CRRYWTRGGALRNVPV 117


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  144 bits (362), Expect = 2e-32
 Identities = 66/76 (86%), Positives = 68/76 (89%)
 Frame = -1

Query: 617 HGGGDQAVSSRPGSMVERARMANIALPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 438
           HGGG    S RPGSM +RAR+ANI LPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCKT
Sbjct: 43  HGGGGTG-SIRPGSMADRARLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 101

Query: 437 CRRYWTRGGALRNVPV 390
           CRRYWTRGGALRNVPV
Sbjct: 102 CRRYWTRGGALRNVPV 117


>ref|XP_003604971.1| Dof zinc finger protein [Medicago truncatula]
           gi|355506026|gb|AES87168.1| Dof zinc finger protein
           [Medicago truncatula]
          Length = 404

 Score =  142 bits (359), Expect = 4e-32
 Identities = 65/76 (85%), Positives = 68/76 (89%)
 Frame = -1

Query: 617 HGGGDQAVSSRPGSMVERARMANIALPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 438
           HGGG    S RPGSM +RARMAN+ +PE ALKCPRCESTNTKFCYFNNYSLSQPRHFCKT
Sbjct: 53  HGGGSTG-SIRPGSMSDRARMANMPMPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKT 111

Query: 437 CRRYWTRGGALRNVPV 390
           CRRYWTRGGALRNVPV
Sbjct: 112 CRRYWTRGGALRNVPV 127


>ref|XP_002879686.1| Dof-type zinc finger domain-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325525|gb|EFH55945.1| Dof-type zinc
           finger domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 326

 Score =  142 bits (358), Expect = 5e-32
 Identities = 64/75 (85%), Positives = 67/75 (89%)
 Frame = -1

Query: 614 GGGDQAVSSRPGSMVERARMANIALPEPALKCPRCESTNTKFCYFNNYSLSQPRHFCKTC 435
           GGG    S R GSMV+RAR AN+ALPE ALKCPRCESTNTKFCYFNNYSL+QPRHFCKTC
Sbjct: 56  GGGSGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTC 115

Query: 434 RRYWTRGGALRNVPV 390
           RRYWTRGGALRNVPV
Sbjct: 116 RRYWTRGGALRNVPV 130


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