BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017598
         (1962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   404   e-130
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   399   e-128
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   402   e-128
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   405   e-127
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   396   e-123

>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
            gi|449518825|ref|XP_004166436.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g02370,
            mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  404 bits (1039), Expect(2) = e-130
 Identities = 209/407 (51%), Positives = 279/407 (68%), Gaps = 1/407 (0%)
 Frame = +3

Query: 420  RGIIFSDKDHVVCLDLVSKVKGTSAAENYFGDLSPSAKNKFTYGALLNCYCKEKLTDKAQ 599
            R I +S  D+ + LDL+SKV G +AAE YF DL PSAKN+ TYGALLNCYCKE + +KA 
Sbjct: 70   RKINYSFTDYALRLDLISKVNGVTAAEKYFYDLPPSAKNRCTYGALLNCYCKEMMEEKAL 129

Query: 600  CLFEKMDDLGVVSSMSFNSLMTLYMRSNLPEKVPFLVQDMKKKNISPCVFSYNIWMSSCS 779
             LF+KMD+L + +S+SFN+LMT+YMR + PEKVP L+ +MK++      F+YN+WM+SC+
Sbjct: 130  TLFKKMDELKISTSLSFNNLMTMYMRMDHPEKVPPLIGEMKQRGFYLTTFTYNVWMNSCA 189

Query: 780  CLDDIDGVERVYNEM-VYNGQKCDWTTFINLAVAYVKAGQHEKAESALKKVEEEIQKMDR 956
             L+DI  VE +  EM + +  K DWTT+ NLA  YVKAGQ EKAE ALKK+EEE+ K D+
Sbjct: 190  SLNDIGKVEEILEEMKMEDRNKFDWTTYSNLASFYVKAGQFEKAELALKKLEEEM-KSDK 248

Query: 957  PRDRSPFHFLLSLYSKISNLTEVHIIWNSLKPAFEYTSNTSTLVMLQALARLDDVSGLKE 1136
              DR  +H L+SLY+  SNL+EV+ IWN+LK  +   +N S LVMLQAL +L D+ GLK 
Sbjct: 249  -NDRLVYHCLISLYASTSNLSEVNRIWNALKSVYSTMTNISYLVMLQALRKLKDIEGLKR 307

Query: 1137 VFEEWESTCSYYDRRLPNTAIALYLKHDIVEEAENVFHNLVKKCETPFYRPWGLFMSYYL 1316
             ++EWES C  +D R+ N  I  YL+ D+ E+A  +F +  K+ + PF R   +FM Y+L
Sbjct: 308  TYKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFL 367

Query: 1317 KKNQIDLALRCLEAAISGVNNNEWRPFGVDVTRFMEYFEKEGDVIGAEKLYKILKKTNSI 1496
            K  Q+D A   LE+A+S     EW P     T F+ YFE+E DV GAE   +ILK+   +
Sbjct: 368  KLKQVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCL 427

Query: 1497 DYEAYKLLLRVYVAASKTAPQLRWRMKDDGVEISCELEELLRSVCPE 1637
            D   Y LLL+ YVAA K AP +R R+K+D +EIS ELEELL +VCP+
Sbjct: 428  DASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVCPQ 474



 Score = 89.0 bits (219), Expect(2) = e-130
 Identities = 38/67 (56%), Positives = 54/67 (80%)
 Frame = +2

Query: 233 RKTLYGRLSAVNVAGQTVAQTLNQYIKEGNIVNKIELEKCVKELRKYARYNHALEVMEWM 412
           ++ LY RLSA+   G +VA+T+NQ+I EGNIV K ELEKC+KELRKY RY+H L++MEWM
Sbjct: 8   QRGLYPRLSALGATGGSVAKTINQFIMEGNIVKKYELEKCIKELRKYRRYHHCLQIMEWM 67

Query: 413 KKKRYHF 433
           + ++ ++
Sbjct: 68  ETRKINY 74


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  399 bits (1026), Expect(2) = e-128
 Identities = 213/410 (51%), Positives = 285/410 (69%), Gaps = 2/410 (0%)
 Frame = +3

Query: 414  KKRGIIFSDKDHVVCLDLVSKVKGTSAAENYFGDLSPSAKNKFTYGALLNCYCKEKLTDK 593
            + R I FS  D+ V LDL+SK KG + AE YF +LSPSAKN  TYG LLNCYCKEK+ +K
Sbjct: 103  ENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKMEEK 162

Query: 594  AQCLFEKMDDLGVVS-SMSFNSLMTLYMRSNLPEKVPFLVQDMKKKNISPCVFSYNIWMS 770
            A  LFEKMD+L   S S++FN+LM+L+MR   PE VP LV +MKK++ISP  F+YNI M 
Sbjct: 163  ALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNILMQ 222

Query: 771  SCSCLDDIDGVERVYNEMVY-NGQKCDWTTFINLAVAYVKAGQHEKAESALKKVEEEIQK 947
            S + L+DI+G ERV  E+   N  K  WTT+ NLA  YV A   EKAE ALKK+EEE+  
Sbjct: 223  SYARLNDIEGAERVLEEIKRENEDKLSWTTYSNLAAVYVNARLFEKAELALKKLEEEMGF 282

Query: 948  MDRPRDRSPFHFLLSLYSKISNLTEVHIIWNSLKPAFEYTSNTSTLVMLQALARLDDVSG 1127
                 DR  +HFL+SLY+ I+NL+EV+ +WNSLK AF  T+N S  +MLQALA L+DV G
Sbjct: 283  ----HDRLAYHFLISLYAGINNLSEVNRVWNSLKSAFPKTNNMSYFIMLQALANLNDVDG 338

Query: 1128 LKEVFEEWESTCSYYDRRLPNTAIALYLKHDIVEEAENVFHNLVKKCETPFYRPWGLFMS 1307
            LK  FEEW+S+C  +D RL N A+  +L  D++++AE++ +  VK+   PFY    +FM+
Sbjct: 339  LKICFEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMA 398

Query: 1308 YYLKKNQIDLALRCLEAAISGVNNNEWRPFGVDVTRFMEYFEKEGDVIGAEKLYKILKKT 1487
            ++LK  +ID AL+ +EAA S V NNEW+P    V  F++YFE+E DV GAEK  KILK  
Sbjct: 399  HHLKVREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNI 458

Query: 1488 NSIDYEAYKLLLRVYVAASKTAPQLRWRMKDDGVEISCELEELLRSVCPE 1637
            + +D  AY+LLL+  VAA +T P++R RMK+D +E+  + ++LL+ V PE
Sbjct: 459  SGLDSNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEV--DSKDLLQRVGPE 506



 Score = 88.2 bits (217), Expect(2) = e-128
 Identities = 43/109 (39%), Positives = 63/109 (57%)
 Frame = +2

Query: 107 MKMLNLHSLFVKSRPLIRCFCTAIMREQSVEAPATLYTAQVKRKTLYGRLSAVNVAGQTV 286
           M   N + L      L R  CTA    +  E      +  V++  LY RLSA+   G +V
Sbjct: 1   MMARNPNRLISAGAGLARRLCTAAAATEPEEVAVQAASRSVRQPRLYHRLSALGATGGSV 60

Query: 287 AQTLNQYIKEGNIVNKIELEKCVKELRKYARYNHALEVMEWMKKKRYHF 433
           A TLN++IKEG ++ K EL  C+K+LRKY ++ HALE+M+WM+ ++  F
Sbjct: 61  ADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMDWMENRKIFF 109


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  402 bits (1032), Expect(2) = e-128
 Identities = 208/412 (50%), Positives = 282/412 (68%), Gaps = 4/412 (0%)
 Frame = +3

Query: 414  KKRGIIFSDKDHVVCLDLVSKVKGTSAAENYFGDLSPSAKNKFT-YGALLNCYCKEKLTD 590
            +KR + FS  D  + LDL+ K +G +AAE+YF  LSPSAKN  T YGALLNCYCKE ++D
Sbjct: 97   EKRKMNFSYADRAIRLDLIGKARGIAAAEDYFNGLSPSAKNHHTSYGALLNCYCKELMSD 156

Query: 591  KAQCLFEKMDDLGVV-SSMSFNSLMTLYMRSNLPEKVPFLVQDMKKKNISPCVFSYNIWM 767
            KA  LF++MD+   + SS+ FN+LM++YMR   PEKVP LV +MKK+ +SPC F+YNIWM
Sbjct: 157  KALALFQEMDEKKFLYSSLPFNNLMSMYMRLGQPEKVPPLVDEMKKRKVSPCSFTYNIWM 216

Query: 768  SSCSCLDDIDGVERVYNEMVYNGQK--CDWTTFINLAVAYVKAGQHEKAESALKKVEEEI 941
             S  CL+D  GV+RV  E+V +G K    WTT+ NLA  Y+KAG  EKAESALKK+E  +
Sbjct: 217  QSYGCLNDFQGVDRVLREIVNDGGKDNLQWTTYSNLATIYLKAGIFEKAESALKKLEAIM 276

Query: 942  QKMDRPRDRSPFHFLLSLYSKISNLTEVHIIWNSLKPAFEYTSNTSTLVMLQALARLDDV 1121
                  R+R  +HFL+S+Y+   N  EV+ +W  LK +F   +N S LVMLQALA+L DV
Sbjct: 277  GF----RNREAYHFLISIYAGTGNSNEVNRVWGLLKSSFNMINNLSYLVMLQALAKLKDV 332

Query: 1122 SGLKEVFEEWESTCSYYDRRLPNTAIALYLKHDIVEEAENVFHNLVKKCETPFYRPWGLF 1301
             G+ + F EWES C+ YD R+ N AI ++L+HD+ EEAE +F + +K+   PF++    F
Sbjct: 333  EGVAKCFREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERF 392

Query: 1302 MSYYLKKNQIDLALRCLEAAISGVNNNEWRPFGVDVTRFMEYFEKEGDVIGAEKLYKILK 1481
            M ++LK +Q+DLAL+ + AA S    +EW+P    V  + +YF  E DV GAEKL KILK
Sbjct: 393  MLFFLKIHQLDLALKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILK 452

Query: 1482 KTNSIDYEAYKLLLRVYVAASKTAPQLRWRMKDDGVEISCELEELLRSVCPE 1637
              N ++   Y LLL+ Y+AA K AP++R R+++D +EIS ELE LL SVCP+
Sbjct: 453  HINCLNSSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVCPK 504



 Score = 84.7 bits (208), Expect(2) = e-128
 Identities = 41/99 (41%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
 Frame = +2

Query: 146 RPLIRCFCTAIMREQSVEA---PATLYTAQVKRKTLYGRLSAVNVAGQTVAQTLNQYIKE 316
           R ++   C +  R  + EA   PA +   Q ++  LY +LSA+   G +V++TLN++I E
Sbjct: 7   RLILTASCPSRQRFSTAEAAVPPAVVSPRQSEK--LYHKLSALGATGGSVSRTLNEHIME 64

Query: 317 GNIVNKIELEKCVKELRKYARYNHALEVMEWMKKKRYHF 433
           G  + KIEL +C++ELRKY R++HA E+MEWM+K++ +F
Sbjct: 65  GKTITKIELSRCIRELRKYRRFDHAFEIMEWMEKRKMNF 103


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
            predicted protein [Populus trichocarpa]
          Length = 473

 Score =  405 bits (1041), Expect(2) = e-127
 Identities = 209/399 (52%), Positives = 284/399 (71%), Gaps = 3/399 (0%)
 Frame = +3

Query: 447  HVVCLDLVSKVKGTSAAENYFGDLSPSAKNKFTYGALLNCYCKEKLTDKAQCLFEKMDDL 626
            H V LDL++K +G +AAENYF  LSPS +N  T+GALL+CYC+E +++KA  LFEKMD +
Sbjct: 80   HAVYLDLIAKKEGIAAAENYFDGLSPSEQNHSTHGALLSCYCRELMSEKALTLFEKMDKM 139

Query: 627  G-VVSSMSFNSLMTLYMRSNLPEKVPFLVQDMKKKNISPCVFSYNIWMSSCSCLDDIDGV 803
              +++S+ FN+L++L++R + PEKV  +VQ+MK+K +SPC F+YN+WM S  CL+D +GV
Sbjct: 140  KFLLTSLPFNNLISLHLRLDQPEKVLPIVQEMKQKGVSPCTFTYNMWMQSYGCLNDFEGV 199

Query: 804  ERVYNEMVYNGQK-CDWTTFINLAVAYVKAGQHEKAESALKKVEEEIQKMDRPRD-RSPF 977
            ERV +EM  +GQK   WTT+ NLA  YVKAG  +KAESALKKVEE+I+     RD R  +
Sbjct: 200  ERVLDEMKMDGQKNFSWTTYTNLATIYVKAGHFDKAESALKKVEEQIE-----RDYREAY 254

Query: 978  HFLLSLYSKISNLTEVHIIWNSLKPAFEYTSNTSTLVMLQALARLDDVSGLKEVFEEWES 1157
            HFL++LY+  SNL EV+ +WNSLK  F  T+N S L ML  LA+L DV GL + F+EWES
Sbjct: 255  HFLITLYAGTSNLGEVNRVWNSLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWES 314

Query: 1158 TCSYYDRRLPNTAIALYLKHDIVEEAENVFHNLVKKCETPFYRPWGLFMSYYLKKNQIDL 1337
            +C  YD RL N AI   L+HD+ EEA  +F + +K+ E  F+    +FM ++LK +Q+DL
Sbjct: 315  SCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLKNHQLDL 374

Query: 1338 ALRCLEAAISGVNNNEWRPFGVDVTRFMEYFEKEGDVIGAEKLYKILKKTNSIDYEAYKL 1517
            AL+ ++AA S V   EW+P    V+ F  YFE E DV GAE+L KILK  N +D  AY L
Sbjct: 375  ALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLDSNAYDL 434

Query: 1518 LLRVYVAASKTAPQLRWRMKDDGVEISCELEELLRSVCP 1634
            LL+ Y+AA K AP++R R+++DG+EI+ ELE LL  VCP
Sbjct: 435  LLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVCP 473



 Score = 80.5 bits (197), Expect(2) = e-127
 Identities = 33/65 (50%), Positives = 52/65 (80%)
 Frame = +2

Query: 230 KRKTLYGRLSAVNVAGQTVAQTLNQYIKEGNIVNKIELEKCVKELRKYARYNHALEVMEW 409
           KRK LY RLS +  +G++V++TLN ++ EG   NK++L  C++ELRKY R+++A+EVMEW
Sbjct: 11  KRKRLYKRLSELGASGESVSKTLNDFVLEGGKTNKVDLLACIRELRKYGRFDYAIEVMEW 70

Query: 410 MKKKR 424
           M+K++
Sbjct: 71  MQKRK 75


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
            predicted protein [Populus trichocarpa]
          Length = 476

 Score =  396 bits (1017), Expect(2) = e-123
 Identities = 207/419 (49%), Positives = 286/419 (68%), Gaps = 11/419 (2%)
 Frame = +3

Query: 414  KKRGIIFSDKDHVVCLDLVSKVKGTSAAENYFGDLSPSAKNKFTYGALLNCYCKEKLTDK 593
            +KR + FS  DH V LDL +K KG +AAENYF +L PS +N  TY  LLNCYCKE +++K
Sbjct: 58   QKRKMNFSHVDHAVYLDLTAKTKGIAAAENYFDNLPPSVQNHVTYSTLLNCYCKELMSEK 117

Query: 594  AQCLFEKMDDLGVVS-SMSFNSLMTLYMRSNLPEKVPFLVQDMKKKNISPCVFSYNIWMS 770
            A  LFEKMD + ++S SM FN+LMTL+MR   PEKV  +VQ+MK++ +SP  F+YNIWM 
Sbjct: 118  ALTLFEKMDKMKLLSTSMPFNNLMTLHMRLGQPEKVLGIVQEMKQRGVSPGTFTYNIWMQ 177

Query: 771  SCSCLDDIDGVERVYNEMVYNGQK-CDWTTFINLAVAYVKAGQHEKAESALKKVEEEIQ- 944
            S  CL+D +GV+RV +EM  +G++   WTT+ NLA  YVKAG  +KAESAL+K+EE+I+ 
Sbjct: 178  SYGCLNDFEGVQRVLDEMKTDGKENFSWTTYSNLATIYVKAGLFDKAESALRKLEEQIEC 237

Query: 945  --------KMDRPRDRSPFHFLLSLYSKISNLTEVHIIWNSLKPAFEYTSNTSTLVMLQA 1100
                    K     DR  +HFL+SLY+  SNL+EVH +WNSLK +F  T+N S L +LQA
Sbjct: 238  GRDCDFQKKRRHDADREAYHFLISLYAGTSNLSEVHRVWNSLKSSFRTTTNISYLNVLQA 297

Query: 1101 LARLDDVSGLKEVFEEWESTCSYYDRRLPNTAIALYLKHDIVEEAENVFHNLVKKCETPF 1280
            LA+L DV G+ + F+EWES+C  YD  L N AI   L+HD+ EEA ++F   +K+ +  F
Sbjct: 298  LAKLKDVEGILKCFKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLF 357

Query: 1281 YRPWGLFMSYYLKKNQIDLALRCLEAAISGVNNNEWRPFGVDVTRFMEYFEKEGDVIGAE 1460
            ++   +FM ++LK +Q DLAL+ ++AA S     EW+P    V+ F+ YFE   DV GAE
Sbjct: 358  FKAREMFMVFFLKNHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAE 417

Query: 1461 KLYKILKKTNSIDYEAYKLLLRVYVAASKTAPQLRWRMKDDGVEISCELEELLRSVCPE 1637
            +L KI K+ N ++  AY LLL+ Y AA + AP++R R+++D +EI+ ELE LL  V P+
Sbjct: 418  RLCKIWKQINRLNSNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERVSPK 476



 Score = 75.1 bits (183), Expect(2) = e-123
 Identities = 32/64 (50%), Positives = 49/64 (76%)
 Frame = +2

Query: 242 LYGRLSAVNVAGQTVAQTLNQYIKEGNIVNKIELEKCVKELRKYARYNHALEVMEWMKKK 421
           +Y RLS +  +G +V++TLN+ I EG   +KI L  C+K+LRKY R++HA+EVMEWM+K+
Sbjct: 1   MYRRLSELGASGGSVSKTLNELILEGGKTSKINLTTCIKKLRKYGRFDHAIEVMEWMQKR 60

Query: 422 RYHF 433
           + +F
Sbjct: 61  KMNF 64