BLASTX nr result

ID: Bupleurum21_contig00017579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017579
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-l...   385   e-104
emb|CBI27588.3| unnamed protein product [Vitis vinifera]              385   e-104
emb|CBI27589.3| unnamed protein product [Vitis vinifera]              383   e-104
emb|CAN79835.1| hypothetical protein VITISV_036161 [Vitis vinifera]   383   e-104
ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloproteas...   378   e-102

>ref|XP_002265232.2| PREDICTED: peroxisomal biogenesis factor 6-like [Vitis vinifera]
          Length = 543

 Score =  385 bits (988), Expect = e-104
 Identities = 187/268 (69%), Positives = 227/268 (84%)
 Frame = -1

Query: 1087 GSNWNSNDTILDHPMTFENLALDSKLKNEIVEDLEMFKKGKQFYKQIGKAWKRGYLLYGP 908
            G  W S +  LDHP TFE LA+D KLK ++++DL+ F + ++FYK++GKAWKRGYLLYGP
Sbjct: 253  GGAWGSIN--LDHPSTFETLAMDLKLKEDLIKDLDRFVRRRKFYKRVGKAWKRGYLLYGP 310

Query: 907  PGTGKSSMIAAMANYLKFDIYELELTSLQNNADLKRTLVSTANRSILVIEDIDCSAELKN 728
            PGTGK+S+IAAMANYLKFD+Y+LELTSLQ N+ L++ LVST NRSILVIEDIDCS EL++
Sbjct: 311  PGTGKTSLIAAMANYLKFDVYDLELTSLQRNSQLRKLLVSTKNRSILVIEDIDCSTELQD 370

Query: 727  RQDEDYNQNNQKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIH 548
            RQ   YNQ   +LTLSGLLNFIDGLWSSCGDERIIVFTTNHKDR+DPALLRPGRMD+HIH
Sbjct: 371  RQAGRYNQPTTQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIH 430

Query: 547  MSYCTPSGFKILASNYLGITNHILFCKIEKLVTEVEATPAEIAEQLMKSEAADVSLEGLV 368
            MSYCTP GFK LASNYLG++NH LF +IE+L+TEVE TPAEIAE+LMKSE ADV+LEGL+
Sbjct: 431  MSYCTPYGFKTLASNYLGVSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLI 490

Query: 367  KFLEDKKIASSEATTCGGKVEDADHNGT 284
            +FL+  KIA +++    G+ ++ D  GT
Sbjct: 491  EFLKRAKIAENKS---NGEGKEVDEQGT 515


>emb|CBI27588.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  385 bits (988), Expect = e-104
 Identities = 187/268 (69%), Positives = 227/268 (84%)
 Frame = -1

Query: 1087 GSNWNSNDTILDHPMTFENLALDSKLKNEIVEDLEMFKKGKQFYKQIGKAWKRGYLLYGP 908
            G  W S +  LDHP TFE LA+D KLK ++++DL+ F + ++FYK++GKAWKRGYLLYGP
Sbjct: 181  GGAWGSIN--LDHPSTFETLAMDLKLKEDLIKDLDRFVRRRKFYKRVGKAWKRGYLLYGP 238

Query: 907  PGTGKSSMIAAMANYLKFDIYELELTSLQNNADLKRTLVSTANRSILVIEDIDCSAELKN 728
            PGTGK+S+IAAMANYLKFD+Y+LELTSLQ N+ L++ LVST NRSILVIEDIDCS EL++
Sbjct: 239  PGTGKTSLIAAMANYLKFDVYDLELTSLQRNSQLRKLLVSTKNRSILVIEDIDCSTELQD 298

Query: 727  RQDEDYNQNNQKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIH 548
            RQ   YNQ   +LTLSGLLNFIDGLWSSCGDERIIVFTTNHKDR+DPALLRPGRMD+HIH
Sbjct: 299  RQAGRYNQPTTQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIH 358

Query: 547  MSYCTPSGFKILASNYLGITNHILFCKIEKLVTEVEATPAEIAEQLMKSEAADVSLEGLV 368
            MSYCTP GFK LASNYLG++NH LF +IE+L+TEVE TPAEIAE+LMKSE ADV+LEGL+
Sbjct: 359  MSYCTPYGFKTLASNYLGVSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLI 418

Query: 367  KFLEDKKIASSEATTCGGKVEDADHNGT 284
            +FL+  KIA +++    G+ ++ D  GT
Sbjct: 419  EFLKRAKIAENKS---NGEGKEVDEQGT 443


>emb|CBI27589.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  383 bits (983), Expect = e-104
 Identities = 185/262 (70%), Positives = 223/262 (85%)
 Frame = -1

Query: 1087 GSNWNSNDTILDHPMTFENLALDSKLKNEIVEDLEMFKKGKQFYKQIGKAWKRGYLLYGP 908
            G  W S +  LDHP TFE LA+D KLK ++++DL+ F + ++FYK++GKAWKRGYLLYGP
Sbjct: 181  GGAWGSIN--LDHPSTFETLAMDLKLKEDLIKDLDRFVRRRKFYKRVGKAWKRGYLLYGP 238

Query: 907  PGTGKSSMIAAMANYLKFDIYELELTSLQNNADLKRTLVSTANRSILVIEDIDCSAELKN 728
            PGTGK+S+IAAMANYLKFD+Y+LELTSLQ N+ L++ LVST NRSILVIEDIDCS EL++
Sbjct: 239  PGTGKTSLIAAMANYLKFDVYDLELTSLQRNSQLRKLLVSTKNRSILVIEDIDCSTELQD 298

Query: 727  RQDEDYNQNNQKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIH 548
            RQ   YNQ   +LTLSGLLNFIDGLWSSCGDERIIVFTTNHKDR+DPALLRPGRMD+HIH
Sbjct: 299  RQAGRYNQPTTQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIH 358

Query: 547  MSYCTPSGFKILASNYLGITNHILFCKIEKLVTEVEATPAEIAEQLMKSEAADVSLEGLV 368
            MSYCTP GFK LASNYLG++NH LF +IE+L+TEVE TPAEIAE+LMKSE ADV+LEGL+
Sbjct: 359  MSYCTPYGFKTLASNYLGVSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLI 418

Query: 367  KFLEDKKIASSEATTCGGKVED 302
             FL+  K A +++   G KV++
Sbjct: 419  AFLKRAKSAENKSNCRGKKVDE 440


>emb|CAN79835.1| hypothetical protein VITISV_036161 [Vitis vinifera]
          Length = 476

 Score =  383 bits (983), Expect = e-104
 Identities = 185/262 (70%), Positives = 223/262 (85%)
 Frame = -1

Query: 1087 GSNWNSNDTILDHPMTFENLALDSKLKNEIVEDLEMFKKGKQFYKQIGKAWKRGYLLYGP 908
            G  W S +  LDHP TFE LA+D KLK ++++DL+ F + ++FYK++GKAWKRGYLLYGP
Sbjct: 177  GGAWGSIN--LDHPSTFETLAMDLKLKEDLIKDLDRFVRRRKFYKRVGKAWKRGYLLYGP 234

Query: 907  PGTGKSSMIAAMANYLKFDIYELELTSLQNNADLKRTLVSTANRSILVIEDIDCSAELKN 728
            PGTGK+S+IAAMANYLKFD+Y+LELTSLQ N+ L++ LVST NRSILVIEDIDCS EL++
Sbjct: 235  PGTGKTSLIAAMANYLKFDVYDLELTSLQRNSQLRKLLVSTKNRSILVIEDIDCSTELQD 294

Query: 727  RQDEDYNQNNQKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVHIH 548
            RQ   YNQ   +LTLSGLLNFIDGLWSSCGDERIIVFTTNHKDR+DPALLRPGRMD+HIH
Sbjct: 295  RQAGRYNQPTTQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRIDPALLRPGRMDMHIH 354

Query: 547  MSYCTPSGFKILASNYLGITNHILFCKIEKLVTEVEATPAEIAEQLMKSEAADVSLEGLV 368
            MSYCTP GFK LASNYLG++NH LF +IE+L+TEVE TPAEIAE+LMKSE ADV+LEGL+
Sbjct: 355  MSYCTPYGFKTLASNYLGVSNHRLFTEIERLITEVEVTPAEIAEELMKSEEADVALEGLI 414

Query: 367  KFLEDKKIASSEATTCGGKVED 302
             FL+  K A +++   G KV++
Sbjct: 415  AFLKRAKSAENKSNCRGKKVDE 436


>ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic
            [Vitis vinifera]
          Length = 516

 Score =  378 bits (970), Expect = e-102
 Identities = 188/282 (66%), Positives = 224/282 (79%), Gaps = 4/282 (1%)
 Frame = -1

Query: 1093 DYGSNWNSNDTILDHPMTFENLALDSKLKNEIVEDLEMFKKGKQFYKQIGKAWKRGYLLY 914
            DY   W S +  L HP TF+ LA+D  LK E++ DL+ F + ++FY+++GKAWKRGYLLY
Sbjct: 205  DYDGPWGSIN--LSHPCTFDTLAMDPTLKKELIADLDRFVRRREFYQKVGKAWKRGYLLY 262

Query: 913  GPPGTGKSSMIAAMANYLKFDIYELELTSLQNNADLKRTLVSTANRSILVIEDIDCSAEL 734
            GPPGTGKSS+IAAMANYLKF+IY+LELTSL NN+DL+R LVSTANRSILVIEDIDCS EL
Sbjct: 263  GPPGTGKSSLIAAMANYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVEL 322

Query: 733  KNRQDEDYNQNNQKLTLSGLLNFIDGLWSSCGDERIIVFTTNHKDRLDPALLRPGRMDVH 554
            +NRQ+   N  + +LTLSGLLNFIDGLWSSCGDERIIVFTTNHK+RLDPALLRPGRMD+H
Sbjct: 323  QNRQNGSDNNTDSQLTLSGLLNFIDGLWSSCGDERIIVFTTNHKERLDPALLRPGRMDMH 382

Query: 553  IHMSYCTPSGFKILASNYLGITNHILFCKIEKLVTEVEATPAEIAEQLMKSEAADVSLEG 374
            IHMSYCTPSGFKILA+NYL I  H LF KIE+L+TEVE TPAEIAE+L+K E  DV+LEG
Sbjct: 383  IHMSYCTPSGFKILAANYLNINTHPLFTKIERLMTEVEVTPAEIAEELLKCEEVDVALEG 442

Query: 373  LVKFLEDKKIASSEATTCGGKVEDADH----NGTGSDEIRKE 260
            ++KFLE KK+           V++ D     NG   D++  E
Sbjct: 443  IIKFLERKKMQVEHDEKSNEGVKEVDEQEVSNGIKGDKMVSE 484


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