BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017560
         (944 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 is...   436   e-120
ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsi...   425   e-117
ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arab...   419   e-115
gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis tha...   416   e-114
ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis tha...   416   e-114

>ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
           vinifera] gi|297746225|emb|CBI16281.3| unnamed protein
           product [Vitis vinifera]
          Length = 245

 Score =  436 bits (1121), Expect = e-120
 Identities = 207/229 (90%), Positives = 220/229 (96%)
 Frame = +3

Query: 81  EASSERTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKSVGKHSLLGAS 260
           +A S+RTLYPYVTGTSV+ +KYKDGILMAADMGGSYGSTLRYKSVERMK +GKHSLLGAS
Sbjct: 17  QADSQRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGAS 76

Query: 261 GEISDFQEILRYLDELILHDNMWDDGNSLGPKEVHNYLTRLMYNRRNKFNPLWNSLVLGG 440
           GEISDFQEIL YLDELIL+DNMWDDGNSLGPKEVH+YLTR+MYNRRNKFNPLWNSLVLGG
Sbjct: 77  GEISDFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLVLGG 136

Query: 441 VKNGHKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCMRVL 620
           VKNG KYLG VSMIGVHFEDNHVATGFGNHLARPILRDEW EDLSFE+GVKLLEKCMRVL
Sbjct: 137 VKNGQKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCMRVL 196

Query: 621 LYRDTSAINKLQISKITEEGVTISQPYSLKTFWGYGAFKNPTVGAEGSW 767
           LYRD SA+NKLQI+KITEEGVTISQPYSLKTFWG+ AF+NPTVGAEGSW
Sbjct: 197 LYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245


>ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
           gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit
           PBG1 [Arabidopsis lyrata subsp. lyrata]
          Length = 245

 Score =  425 bits (1093), Expect = e-117
 Identities = 203/233 (87%), Positives = 222/233 (95%)
 Frame = +3

Query: 69  LSNHEASSERTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKSVGKHSL 248
           + N EA S+RTLYPYVTGTSVVAIKYKDGILMA+DMGGSYGSTLRYK++ERMK++GKHSL
Sbjct: 13  VKNAEADSQRTLYPYVTGTSVVAIKYKDGILMASDMGGSYGSTLRYKNIERMKAIGKHSL 72

Query: 249 LGASGEISDFQEILRYLDELILHDNMWDDGNSLGPKEVHNYLTRLMYNRRNKFNPLWNSL 428
           LGASGEISDFQEILRYLDEL+L+DNMWDDGNSLGPKEV NYLTR++YNRRNKFNPLWN+L
Sbjct: 73  LGASGEISDFQEILRYLDELMLNDNMWDDGNSLGPKEVLNYLTRVVYNRRNKFNPLWNTL 132

Query: 429 VLGGVKNGHKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKC 608
           V+GGVK G KYLGMVSMIGV FEDNHVATGFGNHLARPILRDEW+EDLSFEEGVKLLEKC
Sbjct: 133 VVGGVKYGEKYLGMVSMIGVSFEDNHVATGFGNHLARPILRDEWREDLSFEEGVKLLEKC 192

Query: 609 MRVLLYRDTSAINKLQISKITEEGVTISQPYSLKTFWGYGAFKNPTVGAEGSW 767
           MRVLLYRD SAINKLQI+K+TEEGVT+S+PYSLKTFW + AF NPTVGAEGSW
Sbjct: 193 MRVLLYRDRSAINKLQIAKMTEEGVTVSEPYSLKTFWDFKAFTNPTVGAEGSW 245


>ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
           lyrata] gi|297337802|gb|EFH68219.1| hypothetical protein
           ARALYDRAFT_474808 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  419 bits (1077), Expect = e-115
 Identities = 197/229 (86%), Positives = 216/229 (94%)
 Frame = +3

Query: 81  EASSERTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKSVGKHSLLGAS 260
           E  S+RTLYPYVTGTS+VAIKYKDG+LMA+DMGGSYGSTLRYK++ER+K++GKHSLLGAS
Sbjct: 18  EEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS 77

Query: 261 GEISDFQEILRYLDELILHDNMWDDGNSLGPKEVHNYLTRLMYNRRNKFNPLWNSLVLGG 440
           GEISDFQEILRYLDEL L+DNMWDDGNSLGPKE+HNYLTR+MYNRRNKFNPLWN+LVLGG
Sbjct: 78  GEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG 137

Query: 441 VKNGHKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCMRVL 620
           VKNG  YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  DLSFE+GVKLLEKCMRVL
Sbjct: 138 VKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVL 197

Query: 621 LYRDTSAINKLQISKITEEGVTISQPYSLKTFWGYGAFKNPTVGAEGSW 767
           LYRD SAINKLQI+KITEEGVT+SQPYSLKTFW + +F NPT GAEGSW
Sbjct: 198 LYRDRSAINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGSW 246


>gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
          Length = 246

 Score =  416 bits (1069), Expect = e-114
 Identities = 196/229 (85%), Positives = 215/229 (93%)
 Frame = +3

Query: 81  EASSERTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKSVGKHSLLGAS 260
           E  S+RTLYPYVTGTSVVAIKYKDG+LMA+DMGGSYGSTLRYK++ER+K++GKHSLLGAS
Sbjct: 18  EEESQRTLYPYVTGTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS 77

Query: 261 GEISDFQEILRYLDELILHDNMWDDGNSLGPKEVHNYLTRLMYNRRNKFNPLWNSLVLGG 440
           GEISDFQEILRYLDEL L+DNMWDDGNSLGPKE+HNYLTR+MYNRRNKFNPLWN+LVLGG
Sbjct: 78  GEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG 137

Query: 441 VKNGHKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCMRVL 620
           VKNG  YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  DLSFE+GVKLLEKCMRVL
Sbjct: 138 VKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVL 197

Query: 621 LYRDTSAINKLQISKITEEGVTISQPYSLKTFWGYGAFKNPTVGAEGSW 767
           LYRD SAINKLQI+KITEEGVT+SQPYSLKT+W + +F NPT GA GSW
Sbjct: 198 LYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246


>ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
           gi|82581521|sp|Q7DLR9.2|PSB4_ARATH RecName:
           Full=Proteasome subunit beta type-4; AltName: Full=20S
           proteasome beta subunit G-1; AltName: Full=Proteasome
           component H; AltName: Full=Proteasome subunit beta
           type-7; Flags: Precursor
           gi|12323023|gb|AAG51500.1|AC058785_3 20S proteasome beta
           subunit (PBG1) [Arabidopsis thaliana]
           gi|14190405|gb|AAK55683.1|AF378880_1 At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|15010590|gb|AAK73954.1|
           At1g56450/F13N6_3 [Arabidopsis thaliana]
           gi|15450551|gb|AAK96453.1| At1g56450/F13N6_3
           [Arabidopsis thaliana] gi|62320870|dbj|BAD93840.1|
           putative protein [Arabidopsis thaliana]
           gi|332195276|gb|AEE33397.1| proteasome subunit beta
           type-4 [Arabidopsis thaliana]
          Length = 246

 Score =  416 bits (1068), Expect = e-114
 Identities = 195/229 (85%), Positives = 215/229 (93%)
 Frame = +3

Query: 81  EASSERTLYPYVTGTSVVAIKYKDGILMAADMGGSYGSTLRYKSVERMKSVGKHSLLGAS 260
           E  S+RTLYPYVTGTS+VAIKYKDG+LMA+DMGGSYGSTLRYK++ER+K++GKHSLLGAS
Sbjct: 18  EEESQRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGAS 77

Query: 261 GEISDFQEILRYLDELILHDNMWDDGNSLGPKEVHNYLTRLMYNRRNKFNPLWNSLVLGG 440
           GEISDFQEILRYLDEL L+DNMWDDGNSLGPKE+HNYLTR+MYNRRNKFNPLWN+LVLGG
Sbjct: 78  GEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGG 137

Query: 441 VKNGHKYLGMVSMIGVHFEDNHVATGFGNHLARPILRDEWKEDLSFEEGVKLLEKCMRVL 620
           VKNG  YLGMVSMIGV FED+HVATGFGNHLARPILRDEW  DLSFE+GVKLLEKCMRVL
Sbjct: 138 VKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVL 197

Query: 621 LYRDTSAINKLQISKITEEGVTISQPYSLKTFWGYGAFKNPTVGAEGSW 767
           LYRD SAINKLQI+KITEEGVT+SQPYSLKT+W + +F NPT GA GSW
Sbjct: 198 LYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246