BLASTX nr result

ID: Bupleurum21_contig00017549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017549
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   219   6e-55
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              219   6e-55
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   206   7e-51
ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|2...   190   4e-46
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...   182   8e-44

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  219 bits (558), Expect = 6e-55
 Identities = 123/204 (60%), Positives = 152/204 (74%)
 Frame = -2

Query: 837 WRSSGVLSTEAIHAVQSLKLAAAAKSPHKLQLVFDAXXXXXXXXXXXXXXXXLKRQNQLD 658
           WRS  VLSTEAI  VQSLKLA   KS  KL+ VF +                L+RQ +LD
Sbjct: 40  WRSR-VLSTEAIQVVQSLKLA---KSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELD 95

Query: 657 LALQVFDFLRKEVLLHEPDHLSLYSDMILMLGRNKLIHKAEELFSELEKQGLKPDTRAYT 478
           L L+VF+F+RKEV  ++PD LSLYSDMI++LG+ KLI  AE LFSEL+K+GL+PDTR YT
Sbjct: 96  LTLKVFEFIRKEVW-YKPD-LSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYT 153

Query: 477 ELIGAYLQVDMLQKAMETYESMKESGCTPDKLTLIILIRNLETAGEPQLAAQVKEDCYKY 298
           E+IGAYLQV M +KAME Y  MK SGC PDKLTL ILIRNLE AGE +LAA VK++C +Y
Sbjct: 154 EMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEY 213

Query: 297 LDSPKQFLQEAERTFPKRRSLDLI 226
           +D PK+FL+E E+ +PKRRS++L+
Sbjct: 214 VDYPKKFLEEIEKKYPKRRSVNLV 237


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  219 bits (558), Expect = 6e-55
 Identities = 123/204 (60%), Positives = 152/204 (74%)
 Frame = -2

Query: 837 WRSSGVLSTEAIHAVQSLKLAAAAKSPHKLQLVFDAXXXXXXXXXXXXXXXXLKRQNQLD 658
           WRS  VLSTEAI  VQSLKLA   KS  KL+ VF +                L+RQ +LD
Sbjct: 45  WRSR-VLSTEAIQVVQSLKLA---KSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELD 100

Query: 657 LALQVFDFLRKEVLLHEPDHLSLYSDMILMLGRNKLIHKAEELFSELEKQGLKPDTRAYT 478
           L L+VF+F+RKEV  ++PD LSLYSDMI++LG+ KLI  AE LFSEL+K+GL+PDTR YT
Sbjct: 101 LTLKVFEFIRKEVW-YKPD-LSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYT 158

Query: 477 ELIGAYLQVDMLQKAMETYESMKESGCTPDKLTLIILIRNLETAGEPQLAAQVKEDCYKY 298
           E+IGAYLQV M +KAME Y  MK SGC PDKLTL ILIRNLE AGE +LAA VK++C +Y
Sbjct: 159 EMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEY 218

Query: 297 LDSPKQFLQEAERTFPKRRSLDLI 226
           +D PK+FL+E E+ +PKRRS++L+
Sbjct: 219 VDYPKKFLEEIEKKYPKRRSVNLV 242


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  206 bits (523), Expect = 7e-51
 Identities = 117/195 (60%), Positives = 143/195 (73%)
 Frame = -2

Query: 837 WRSSGVLSTEAIHAVQSLKLAAAAKSPHKLQLVFDAXXXXXXXXXXXXXXXXLKRQNQLD 658
           WRS  VLSTEAI  VQSLKLA   KS  KL+ VF +                L+RQ +LD
Sbjct: 40  WRSR-VLSTEAIQVVQSLKLA---KSSIKLEEVFSSRVSRLLKSDLLDTLAELQRQGELD 95

Query: 657 LALQVFDFLRKEVLLHEPDHLSLYSDMILMLGRNKLIHKAEELFSELEKQGLKPDTRAYT 478
           L L+VF+F+RKEV  ++PD LSLYSDMI++LG+ KLI  AE LFSEL+K+GL+PDTR YT
Sbjct: 96  LTLKVFEFIRKEVW-YKPD-LSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYT 153

Query: 477 ELIGAYLQVDMLQKAMETYESMKESGCTPDKLTLIILIRNLETAGEPQLAAQVKEDCYKY 298
           E+IGAYLQV M +KAME Y  MK SGC PDKLTL ILIRNLE AGE +LAA VK++C +Y
Sbjct: 154 EMIGAYLQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEY 213

Query: 297 LDSPKQFLQEAERTF 253
           +D PK+FL+E E+ +
Sbjct: 214 VDYPKKFLEEIEKKY 228


>ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|222852675|gb|EEE90222.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  190 bits (482), Expect = 4e-46
 Identities = 108/194 (55%), Positives = 139/194 (71%), Gaps = 1/194 (0%)
 Frame = -2

Query: 837 WRSSGVLSTEAIHAVQSLKLAAAAKSPHKLQLVFDAXXXXXXXXXXXXXXXXLKRQNQLD 658
           WR+   LSTEAI  +QSLKLA +  S  +L+ VF++                L+ QN+LD
Sbjct: 41  WRAKR-LSTEAIQVIQSLKLARS--STPRLEEVFNSKLSRLLKTDLLDTLAVLQNQNELD 97

Query: 657 LALQVFDFLRKEVLLHEPDHLSLYSDMILMLGRNKLIHKAEELFSELEKQ-GLKPDTRAY 481
           LAL+VF+F+RKEV  ++PD L LY  MI M+GRNK++  AEE F +LEK+ GLKPDTRA+
Sbjct: 98  LALKVFEFVRKEVW-YKPDIL-LYHAMIQMVGRNKMVEMAEEFFGKLEKEEGLKPDTRAF 155

Query: 480 TELIGAYLQVDMLQKAMETYESMKESGCTPDKLTLIILIRNLETAGEPQLAAQVKEDCYK 301
           TE+IGAYLQV M+ KAMETYE MK SGC PDKLT  ILIRNLE AG+ +L  ++K++C  
Sbjct: 156 TEMIGAYLQVGMIDKAMETYERMKASGCDPDKLTFRILIRNLEDAGKEELVDRIKKECGD 215

Query: 300 YLDSPKQFLQEAER 259
           Y+D PK+FL+E ER
Sbjct: 216 YMDYPKKFLEEVER 229


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score =  182 bits (462), Expect = 8e-44
 Identities = 102/193 (52%), Positives = 134/193 (69%)
 Frame = -2

Query: 837 WRSSGVLSTEAIHAVQSLKLAAAAKSPHKLQLVFDAXXXXXXXXXXXXXXXXLKRQNQLD 658
           WRS  V STEAI A+QSLKLA ++    +L  VF+                 L++QN+LD
Sbjct: 43  WRSKRV-STEAIQAIQSLKLAKSSNP--RLHQVFNTKLSRLLKTDLLDVLEILQKQNELD 99

Query: 657 LALQVFDFLRKEVLLHEPDHLSLYSDMILMLGRNKLIHKAEELFSELEKQGLKPDTRAYT 478
           LAL+VF+F++KE+  ++PD L+LY  MI MLG+NK+   AE  FS+LEK+GLKPDTRA+ 
Sbjct: 100 LALKVFEFVQKEIW-YKPD-LTLYYGMIEMLGKNKMTEMAEGYFSKLEKEGLKPDTRAFN 157

Query: 477 ELIGAYLQVDMLQKAMETYESMKESGCTPDKLTLIILIRNLETAGEPQLAAQVKEDCYKY 298
           E+IGAYL+V   +KAME Y  MKESGC PDKLT +ILIRNLE AG   L   +K++C  Y
Sbjct: 158 EMIGAYLKVGTTEKAMEMYGRMKESGCVPDKLTFVILIRNLEEAGRNDLVDIIKKECGDY 217

Query: 297 LDSPKQFLQEAER 259
           +D P++FL+E ER
Sbjct: 218 MDYPEKFLEEVER 230


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