BLASTX nr result

ID: Bupleurum21_contig00017545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017545
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149523.1| PREDICTED: vacuolar protein sorting-associat...    62   6e-08
ref|XP_002532537.1| Vacuolar protein sorting protein, putative [...    60   4e-07
ref|XP_003564873.1| PREDICTED: vacuolar protein sorting-associat...    57   2e-06
ref|XP_002322570.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002271570.1| PREDICTED: vacuolar protein sorting-associat...    57   2e-06

>ref|XP_004149523.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog
           [Cucumis sativus] gi|449505810|ref|XP_004162574.1|
           PREDICTED: vacuolar protein sorting-associated protein
           53 homolog [Cucumis sativus]
          Length = 823

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 37/80 (46%), Positives = 42/80 (52%)
 Frame = +3

Query: 9   ITQPPPHAPTSFVPAVTSASAPPXXXXXXXXXXXXXXREDVXXXXXXXXXXXXXXXFKRF 188
           ITQP   +P++  P V S++ P               REDV               FKRF
Sbjct: 745 ITQPSVSSPSA--PPVVSSTPPAPTITSPSTVGLMASREDVLTRAAALGRGAATTGFKRF 802

Query: 189 LALTEAAKDRKDGPFRKLFN 248
           LALTEAAKDRKDGPFRKLFN
Sbjct: 803 LALTEAAKDRKDGPFRKLFN 822


>ref|XP_002532537.1| Vacuolar protein sorting protein, putative [Ricinus communis]
           gi|223527749|gb|EEF29853.1| Vacuolar protein sorting
           protein, putative [Ricinus communis]
          Length = 816

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 35/77 (45%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
 Frame = +3

Query: 27  HAPTSFVPAVTSASAP--PXXXXXXXXXXXXXXREDVXXXXXXXXXXXXXXXFKRFLALT 200
           H P    P++ S+  P  P              REDV               FKRFLALT
Sbjct: 740 HGPAITQPSIASSVGPTAPAAAITNASLGFIASREDVLTRAAALGRGAATTGFKRFLALT 799

Query: 201 EAAKDRKDGPFRKLFNA 251
           EAAKDRKDGPFRKLFNA
Sbjct: 800 EAAKDRKDGPFRKLFNA 816


>ref|XP_003564873.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog
           [Brachypodium distachyon]
          Length = 833

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/80 (45%), Positives = 37/80 (46%)
 Frame = +3

Query: 12  TQPPPHAPTSFVPAVTSASAPPXXXXXXXXXXXXXXREDVXXXXXXXXXXXXXXXFKRFL 191
           T  PP A  S   A  +  A                REDV               FKRFL
Sbjct: 754 TVAPPVATASVPIAPVATQAVSVTPSMSALTGALANREDVLARAAALGRGAATTGFKRFL 813

Query: 192 ALTEAAKDRKDGPFRKLFNA 251
           ALTEAAKDRKDGPFRKLFNA
Sbjct: 814 ALTEAAKDRKDGPFRKLFNA 833


>ref|XP_002322570.1| predicted protein [Populus trichocarpa] gi|222867200|gb|EEF04331.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 38/83 (45%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
 Frame = +3

Query: 9   ITQPPPHAPTSFVPAVTSAS--APPXXXXXXXXXXXXXXREDVXXXXXXXXXXXXXXXFK 182
           ITQP      S  P+V  A+   P               REDV               FK
Sbjct: 497 ITQP------SIAPSVAPAAPLVPATPAIANSTAGFSASREDVLTRAAALGRGAATTGFK 550

Query: 183 RFLALTEAAKDRKDGPFRKLFNA 251
           RFLALTEAAKDRKDGPFRKLFNA
Sbjct: 551 RFLALTEAAKDRKDGPFRKLFNA 573


>ref|XP_002271570.1| PREDICTED: vacuolar protein sorting-associated protein 53 homolog
           [Vitis vinifera] gi|298204761|emb|CBI25259.3| unnamed
           protein product [Vitis vinifera]
          Length = 826

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/85 (47%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
 Frame = +3

Query: 3   SNITQPPPHAPTSFVPAVTSASAPPXXXXXXXXXXXXXX--REDVXXXXXXXXXXXXXXX 176
           S ITQP   A T  V A  +A   P                REDV               
Sbjct: 743 SGITQPSITA-TPVVQATPTAPVAPAALTVANPASVGVIASREDVLTRAAALGRGAATTG 801

Query: 177 FKRFLALTEAAKDRKDGPFRKLFNA 251
           FKRFLALTEAAKDRKDGPFRKLFNA
Sbjct: 802 FKRFLALTEAAKDRKDGPFRKLFNA 826


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