BLASTX nr result

ID: Bupleurum21_contig00017540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017540
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527513.1| conserved hypothetical protein [Ricinus comm...    84   1e-14
ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable bet...    78   6e-13
ref|XP_002527514.1| conserved hypothetical protein [Ricinus comm...    78   6e-13
ref|NP_001237385.1| uncharacterized protein LOC100306091 [Glycin...    77   1e-12

>ref|XP_002527513.1| conserved hypothetical protein [Ricinus communis]
           gi|223533153|gb|EEF34911.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 197

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 46/105 (43%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
 Frame = +2

Query: 95  MEGLIPFLLHTIKKQKPRNNYRSLSDTSNRSYHILIGAAEDSKEGSSHRRTRSNFD--FT 268
           MEGLIP++LH IKKQ+P   Y+S S+ S+RSYH+LIG+  DS  GSSHRRTRS F     
Sbjct: 1   MEGLIPYILHAIKKQRPHRTYKSFSEGSSRSYHLLIGSG-DSINGSSHRRTRSEFQPPAM 59

Query: 269 EKKYDRDSFVYDTSDVTNKSYVTPSNVHASKQIGSSVNFGKTNIN 403
           E    R +  Y  S    K  V    V +  + G++   G+ N++
Sbjct: 60  ELLEQRSALEYVRSSSLRKRSVNSPTVASESKFGTTAYHGRQNLH 104


>ref|XP_002300267.1| predicted protein [Populus trichocarpa] gi|222847525|gb|EEE85072.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/55 (69%), Positives = 46/55 (83%)
 Frame = +2

Query: 95  MEGLIPFLLHTIKKQKPRNNYRSLSDTSNRSYHILIGAAEDSKEGSSHRRTRSNF 259
           MEGLIPFLLH+IKKQKP N+YRSLS  S+RSY +L+G   +S  GSSHRRTRS++
Sbjct: 1   MEGLIPFLLHSIKKQKPHNSYRSLSMGSSRSYRLLMGGEGESVNGSSHRRTRSDY 55


>ref|XP_003555294.1| PREDICTED: LOW QUALITY PROTEIN: probable beta-D-xylosidase 5-like
            [Glycine max]
          Length = 901

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 51/116 (43%), Positives = 71/116 (61%), Gaps = 12/116 (10%)
 Frame = +2

Query: 71   TSKKGAER---MEGLIPFLLHTIKKQKP-RNNYRSL--SDTSNRSYHILIGAAEDSKEGS 232
            + KKG      MEGLIP+L+H IKKQKP  +NYRS   S++SNRSYH+L+  A +S  GS
Sbjct: 783  SGKKGRSSXSIMEGLIPYLIHAIKKQKPHHHNYRSYSHSESSNRSYHVLL--ASESFTGS 840

Query: 233  SHRRTRSNF-----DFTEKKYDRDSFVYDTSDVTNKSYVTPS-NVHASKQIGSSVN 382
            SHRRTRS+F     +F E++Y  D F+         +   P+ NV+A++   +  N
Sbjct: 841  SHRRTRSDFQPPTSEFLEQRYGVDGFLVSPRGQFTAAAPPPTVNVNAAQHSNNITN 896


>ref|XP_002527514.1| conserved hypothetical protein [Ricinus communis]
           gi|223533154|gb|EEF34912.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 39/55 (70%), Positives = 45/55 (81%)
 Frame = +2

Query: 95  MEGLIPFLLHTIKKQKPRNNYRSLSDTSNRSYHILIGAAEDSKEGSSHRRTRSNF 259
           MEGLIP+LLH I+KQKP+N+YRS S  S+RSYH+L GA  DS  GSSHRRTRS F
Sbjct: 1   MEGLIPYLLHAIRKQKPQNSYRSFSVGSSRSYHLLTGA--DSFSGSSHRRTRSEF 53


>ref|NP_001237385.1| uncharacterized protein LOC100306091 [Glycine max]
           gi|255627517|gb|ACU14103.1| unknown [Glycine max]
          Length = 108

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 49/105 (46%), Positives = 68/105 (64%), Gaps = 9/105 (8%)
 Frame = +2

Query: 95  MEGLIPFLLHTIKKQKP-RNNYRSL--SDTSNRSYHILIGAAEDSKEGSSHRRTRSNF-- 259
           MEGLIP+L+H IKKQKP  +NYRS   S++SNRSYH+L+  A +S  GSSHRRT S+F  
Sbjct: 1   MEGLIPYLIHAIKKQKPHHHNYRSYSHSESSNRSYHMLL--ASESFTGSSHRRTGSDFQP 58

Query: 260 ---DFTEKKYDRDSF-VYDTSDVTNKSYVTPSNVHASKQIGSSVN 382
              +F E++Y  D F V   + VT  +     NV+A+++  +  N
Sbjct: 59  PTSEFLEQRYGVDGFLVSPRAQVTTAAPPATVNVNAAQRSNNITN 103


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