BLASTX nr result
ID: Bupleurum21_contig00017538
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00017538 (383 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif... 143 1e-32 gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] 137 7e-31 ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu... 134 8e-30 gb|AAB60916.1| Similar to Holcus major pollen allergen (gb|Z2708... 116 2e-24 gb|AAF23829.1|AC007234_1 F1E22.6 [Arabidopsis thaliana] 116 2e-24 >ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera] gi|297743578|emb|CBI36445.3| unnamed protein product [Vitis vinifera] Length = 279 Score = 143 bits (361), Expect = 1e-32 Identities = 60/74 (81%), Positives = 69/74 (93%) Frame = -2 Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44 ++P++FNLS A THW+SAGATWYG+P+G GSDGGSCGY NAVSQPPFSSM+TGIGPSLY Sbjct: 33 FKPKYFNLSRAGTHWASAGATWYGSPEGAGSDGGSCGYGNAVSQPPFSSMITGIGPSLYK 92 Query: 43 NGKECGACYQVKCT 2 +GKECGACYQVKCT Sbjct: 93 SGKECGACYQVKCT 106 >gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum] Length = 279 Score = 137 bits (346), Expect = 7e-31 Identities = 59/74 (79%), Positives = 65/74 (87%) Frame = -2 Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44 Y+P+HFNLS ATHW +AGATWYG+P G GSDGGSCGY +AVSQ PFSS VTGIGPSLY Sbjct: 29 YKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAPFSSFVTGIGPSLYK 88 Query: 43 NGKECGACYQVKCT 2 +GKECGACYQVKCT Sbjct: 89 SGKECGACYQVKCT 102 >ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum] gi|81367673|gb|ABB71677.1| beta expansin precursor [Solanum lycopersicum] Length = 285 Score = 134 bits (337), Expect = 8e-30 Identities = 57/74 (77%), Positives = 64/74 (86%) Frame = -2 Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44 Y+P+HFNLS ATHW +AGATWYG+P G GSDGGSCGY +AVS+ P SS VTGIGPSLY Sbjct: 29 YKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAPLSSFVTGIGPSLYK 88 Query: 43 NGKECGACYQVKCT 2 +GKECGACYQVKCT Sbjct: 89 SGKECGACYQVKCT 102 >gb|AAB60916.1| Similar to Holcus major pollen allergen (gb|Z27084) [Arabidopsis thaliana] Length = 276 Score = 116 bits (290), Expect = 2e-24 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 3/77 (3%) Frame = -2 Query: 223 YRPRHFNLSAAATH---WSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPS 53 + P+ FN+SAA T WS AG+TWYG P G+GSDGG+CGY NAV+QPPFS MV+ GPS Sbjct: 30 FSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS 89 Query: 52 LYNNGKECGACYQVKCT 2 L+ +GK CGACYQVKCT Sbjct: 90 LFKSGKGCGACYQVKCT 106 >gb|AAF23829.1|AC007234_1 F1E22.6 [Arabidopsis thaliana] Length = 491 Score = 116 bits (290), Expect = 2e-24 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 3/77 (3%) Frame = -2 Query: 223 YRPRHFNLSAAATH---WSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPS 53 + P+ FN+SAA T WS AG+TWYG P G+GSDGG+CGY NAV+QPPFS MV+ GPS Sbjct: 30 FSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS 89 Query: 52 LYNNGKECGACYQVKCT 2 L+ +GK CGACYQVKCT Sbjct: 90 LFKSGKGCGACYQVKCT 106