BLASTX nr result

ID: Bupleurum21_contig00017538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017538
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinif...   143   1e-32
gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]          137   7e-31
ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicu...   134   8e-30
gb|AAB60916.1| Similar to Holcus major pollen allergen (gb|Z2708...   116   2e-24
gb|AAF23829.1|AC007234_1 F1E22.6 [Arabidopsis thaliana]               116   2e-24

>ref|XP_002269190.1| PREDICTED: putative expansin-B2 [Vitis vinifera]
           gi|297743578|emb|CBI36445.3| unnamed protein product
           [Vitis vinifera]
          Length = 279

 Score =  143 bits (361), Expect = 1e-32
 Identities = 60/74 (81%), Positives = 69/74 (93%)
 Frame = -2

Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44
           ++P++FNLS A THW+SAGATWYG+P+G GSDGGSCGY NAVSQPPFSSM+TGIGPSLY 
Sbjct: 33  FKPKYFNLSRAGTHWASAGATWYGSPEGAGSDGGSCGYGNAVSQPPFSSMITGIGPSLYK 92

Query: 43  NGKECGACYQVKCT 2
           +GKECGACYQVKCT
Sbjct: 93  SGKECGACYQVKCT 106


>gb|ABC47128.1| beta expansin 2 precursor [Solanum tuberosum]
          Length = 279

 Score =  137 bits (346), Expect = 7e-31
 Identities = 59/74 (79%), Positives = 65/74 (87%)
 Frame = -2

Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44
           Y+P+HFNLS  ATHW +AGATWYG+P G GSDGGSCGY +AVSQ PFSS VTGIGPSLY 
Sbjct: 29  YKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSQAPFSSFVTGIGPSLYK 88

Query: 43  NGKECGACYQVKCT 2
           +GKECGACYQVKCT
Sbjct: 89  SGKECGACYQVKCT 102


>ref|NP_001233766.1| beta expansin precursor [Solanum lycopersicum]
           gi|81367673|gb|ABB71677.1| beta expansin precursor
           [Solanum lycopersicum]
          Length = 285

 Score =  134 bits (337), Expect = 8e-30
 Identities = 57/74 (77%), Positives = 64/74 (86%)
 Frame = -2

Query: 223 YRPRHFNLSAAATHWSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPSLYN 44
           Y+P+HFNLS  ATHW +AGATWYG+P G GSDGGSCGY +AVS+ P SS VTGIGPSLY 
Sbjct: 29  YKPKHFNLSTHATHWGTAGATWYGSPHGAGSDGGSCGYGSAVSEAPLSSFVTGIGPSLYK 88

Query: 43  NGKECGACYQVKCT 2
           +GKECGACYQVKCT
Sbjct: 89  SGKECGACYQVKCT 102


>gb|AAB60916.1| Similar to Holcus major pollen allergen (gb|Z27084) [Arabidopsis
           thaliana]
          Length = 276

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
 Frame = -2

Query: 223 YRPRHFNLSAAATH---WSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPS 53
           + P+ FN+SAA T    WS AG+TWYG P G+GSDGG+CGY NAV+QPPFS MV+  GPS
Sbjct: 30  FSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS 89

Query: 52  LYNNGKECGACYQVKCT 2
           L+ +GK CGACYQVKCT
Sbjct: 90  LFKSGKGCGACYQVKCT 106


>gb|AAF23829.1|AC007234_1 F1E22.6 [Arabidopsis thaliana]
          Length = 491

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/77 (66%), Positives = 61/77 (79%), Gaps = 3/77 (3%)
 Frame = -2

Query: 223 YRPRHFNLSAAATH---WSSAGATWYGAPDGFGSDGGSCGYANAVSQPPFSSMVTGIGPS 53
           + P+ FN+SAA T    WS AG+TWYG P G+GSDGG+CGY NAV+QPPFS MV+  GPS
Sbjct: 30  FSPKKFNISAATTSDSDWSIAGSTWYGNPTGYGSDGGACGYGNAVAQPPFSKMVSAGGPS 89

Query: 52  LYNNGKECGACYQVKCT 2
           L+ +GK CGACYQVKCT
Sbjct: 90  LFKSGKGCGACYQVKCT 106


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