BLASTX nr result

ID: Bupleurum21_contig00017516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017516
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indi...   106   2e-21
emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group] gi|1...   106   2e-21
ref|NP_001068391.2| Os11g0656500 [Oryza sativa Japonica Group] g...   106   2e-21
emb|CAE03978.3| OSJNBa0033H08.2 [Oryza sativa Japonica Group]         106   2e-21
gb|ABA96626.1| retrotransposon protein, putative, unclassified [...   105   3e-21

>gb|EEC67008.1| hypothetical protein OsI_33720 [Oryza sativa Indica Group]
          Length = 1068

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +2

Query: 2   WDHNEDVDKTGMFTIEDTTVAEEREFLRDTED----DDRSNMGNNTPQSTRTDGSNT--- 160
           WD     D    F +E TTV          +D      RS+    TP  + T G      
Sbjct: 441 WDAEAAADLDTDFVVEYTTVYHPGSLSGTRQDAWEPPARSSSSPRTPSDSPTAGRTPSVH 500

Query: 161 --------MTPQTPVQRLNPDDYDDSIEPKNIRRIADIYEESELVHL-----DEELFLMG 301
                   ++P T        D+DD+  P   R + ++   + L  L      EEL ++ 
Sbjct: 501 GDAPAVEFVSPPTGAAANLDADHDDA--PLRFRTMDNVLGPAMLPGLANREVQEELMMVS 558

Query: 302 IEEPMNFSQAVKDQNWKAAMENEIQSIEENNTWKLTELPPGKKKIGLKWIFKLKKDADGK 481
            EEP  F+QA +D++W+ AM +EI SIEEN TW+L +LP G + IGLKW++KLKKDA G 
Sbjct: 559 GEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKLKKDAQGV 618

Query: 482 IVKHKA 499
           +VKHKA
Sbjct: 619 VVKHKA 624


>emb|CAH66177.1| OSIGBa0130O15.1 [Oryza sativa Indica Group]
            gi|116309095|emb|CAH66202.1| OSIGBa0148D14.8 [Oryza
            sativa Indica Group]
          Length = 1439

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +2

Query: 2    WDHNEDVDKTGMFTIEDTTVAEEREFLRDTED----DDRSNMGNNTPQSTRTDGSNT--- 160
            WD     D    F +E TTV          +D      RS+    TP  + T G      
Sbjct: 802  WDAEAAADLDTDFVVEYTTVYHPGSLSGTRQDAWEPPARSSSSPRTPSDSPTAGRTPSVH 861

Query: 161  --------MTPQTPVQRLNPDDYDDSIEPKNIRRIADIYEESELVHL-----DEELFLMG 301
                    ++P T        D+DD+  P   R + ++   + L  L      EEL ++ 
Sbjct: 862  GDAPAVEFVSPPTGAAANLDADHDDA--PLRFRTMDNVLGPAMLPGLANREVQEELMMVS 919

Query: 302  IEEPMNFSQAVKDQNWKAAMENEIQSIEENNTWKLTELPPGKKKIGLKWIFKLKKDADGK 481
             EEP  F+QA +D++W+ AM +EI SIEEN TW+L +LP G + IGLKW++KLKKDA G 
Sbjct: 920  GEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKLKKDAQGV 979

Query: 482  IVKHKA 499
            +VKHKA
Sbjct: 980  VVKHKA 985


>ref|NP_001068391.2| Os11g0656500 [Oryza sativa Japonica Group]
            gi|108864629|gb|ABA95163.2| retrotransposon protein,
            putative, unclassified, expressed [Oryza sativa Japonica
            Group] gi|255680327|dbj|BAF28754.2| Os11g0656500 [Oryza
            sativa Japonica Group]
          Length = 1400

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +2

Query: 2    WDHNEDVDKTGMFTIEDTTVAEEREFLRDTEDDD----RSNMGNNTPQSTRTDGSNT--- 160
            WD     D    F +E TTV          +D      RS+    TP  + T G      
Sbjct: 768  WDAEAAADLDTDFVVEYTTVYHPGSLSGTRQDAGEPPARSSSSPQTPSDSPTAGRTPSVH 827

Query: 161  --------MTPQTPVQRLNPDDYDDSIEPKNIRRIADIYEESELVHL-----DEELFLMG 301
                    ++P T        D+DD+  P   R + ++   + L  L      EEL ++ 
Sbjct: 828  GDAPAVEFVSPPTGAAANLDADHDDA--PLRFRTMDNVLGPAMLPGLANREVQEELMMVS 885

Query: 302  IEEPMNFSQAVKDQNWKAAMENEIQSIEENNTWKLTELPPGKKKIGLKWIFKLKKDADGK 481
             EEP  F+QA +D++W+ AM +EI SIEEN TW+L +LP G + IGLKW++KLKKDA G 
Sbjct: 886  GEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKLKKDAQGV 945

Query: 482  IVKHKA 499
            +VKHKA
Sbjct: 946  VVKHKA 951


>emb|CAE03978.3| OSJNBa0033H08.2 [Oryza sativa Japonica Group]
          Length = 1479

 Score =  106 bits (264), Expect = 2e-21
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +2

Query: 2    WDHNEDVDKTGMFTIEDTTVAEEREFLRDTED----DDRSNMGNNTPQSTRTDGSNT--- 160
            WD     D    F +E TTV          +D      RS+    TP  + T G      
Sbjct: 842  WDAEAAADLDTDFVVEYTTVYHPGSLSGTRQDAWEPPARSSSSPRTPSDSPTAGRTPSVH 901

Query: 161  --------MTPQTPVQRLNPDDYDDSIEPKNIRRIADIYEESELVHL-----DEELFLMG 301
                    ++P T        D+DD+  P   R + ++   + L  L      EEL ++ 
Sbjct: 902  GDAPAVEFVSPPTGAAANLDADHDDA--PLRFRTMDNVLGPAMLPGLANREVQEELMMVS 959

Query: 302  IEEPMNFSQAVKDQNWKAAMENEIQSIEENNTWKLTELPPGKKKIGLKWIFKLKKDADGK 481
             EEP  F+QA +D++W+ AM +EI SIEEN TW+L +LP G + IGLKW++KLKKDA G 
Sbjct: 960  GEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKLKKDAQGV 1019

Query: 482  IVKHKA 499
            +VKHKA
Sbjct: 1020 VVKHKA 1025


>gb|ABA96626.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1629

 Score =  105 bits (263), Expect = 3e-21
 Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 20/186 (10%)
 Frame = +2

Query: 2    WDHNEDVDKTGMFTIEDTTVAEEREFLRDTEDDD----RSNMGNNTPQSTRTDGSNT--- 160
            WD     D    F +E TTV          +D      RS+    TP  + T G      
Sbjct: 788  WDAEAAADLDTDFIVEYTTVYHPGSLSGTRQDAGEPPARSSSSPRTPSDSPTAGRTPSVH 847

Query: 161  --------MTPQTPVQRLNPDDYDDSIEPKNIRRIADIYEESELVHL-----DEELFLMG 301
                    ++P T        D+DD+  P   R + ++   + L  L      EEL ++ 
Sbjct: 848  GDAPAVEFVSPPTGAAANLDADHDDA--PLRFRTMDNVLGPAMLPGLANREVQEELMMVS 905

Query: 302  IEEPMNFSQAVKDQNWKAAMENEIQSIEENNTWKLTELPPGKKKIGLKWIFKLKKDADGK 481
             EEP  F+QA +D++W+ AM +EI SIEEN TW+L +LP G + IGLKW++KLKKDA G 
Sbjct: 906  GEEPATFAQAERDEDWRRAMLDEISSIEENKTWRLVDLPSGHRPIGLKWVYKLKKDAQGV 965

Query: 482  IVKHKA 499
            +VKHKA
Sbjct: 966  VVKHKA 971


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