BLASTX nr result

ID: Bupleurum21_contig00017515 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00017515
         (1120 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15095.3| unnamed protein product [Vitis vinifera]              392   e-107
ref|XP_002280411.1| PREDICTED: E2F transcription factor-like E2F...   386   e-105
ref|XP_002511465.1| E2F, putative [Ricinus communis] gi|22355058...   368   2e-99
ref|XP_004157798.1| PREDICTED: E2F transcription factor-like E2F...   362   1e-97
ref|XP_003525157.1| PREDICTED: E2F transcription factor-like E2F...   357   2e-96

>emb|CBI15095.3| unnamed protein product [Vitis vinifera]
          Length = 815

 Score =  392 bits (1008), Expect = e-107
 Identities = 209/372 (56%), Positives = 268/372 (72%), Gaps = 1/372 (0%)
 Frame = -3

Query: 1118 RRCVGTGVLCIVLCSFLSLYDRDGVETIGLDDAAARLGVERRRIYDIVNVLESIGLLTKK 939
            R+    G+LC    +FLSLY+RDGVE IGLDDAA+RLGVERRRIYDIVNVLES+G+L +K
Sbjct: 459  RKQKSLGLLC---SNFLSLYNRDGVEPIGLDDAASRLGVERRRIYDIVNVLESVGVLARK 515

Query: 938  AKNRYSWKGFGVIPKTLQLLKQEGLKESYTAFEDSFTEELSNEDKYEDLQLSNNSSQNEX 759
            AKN+YSWKGFG IPK L+ L++EGL+E++  F+ + + ++ +ED  E     N  SQ + 
Sbjct: 516  AKNQYSWKGFGAIPKALEELREEGLRENFHTFDSNNSAKVDDED--ERFSNPNTGSQQDK 573

Query: 758  XXXXXXXXXXXXXSDNRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAHDLSMM 579
                         +DNR+EKSLGLLTQNFVKLFLCS+V++ISL+EAA+ILLGD  + S+M
Sbjct: 574  SNPSSKLNLNVFFTDNRREKSLGLLTQNFVKLFLCSNVDLISLEEAARILLGDGQNSSIM 633

Query: 578  RTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSF-ETKKRTF 402
            RTKVRRLYDIANVLSSMN IEKT+  E RKPAFRWLGM GK +  + + L+  E+KKRTF
Sbjct: 634  RTKVRRLYDIANVLSSMNLIEKTNQTENRKPAFRWLGMRGKSENGSLSVLNLNESKKRTF 693

Query: 401  GTELTNTSVKRCRVAPSVNATTDQATIPSQTQGECTTAXXXXXXXVGVNDLEKGSIQNVQ 222
            GTE+TN S KR ++A SV   ++Q T   + Q +           +  +D EKG  Q+ +
Sbjct: 694  GTEITNISFKRNKMASSVEGNSNQNT---KMQWQMQVKHENLENGIERSDFEKGPKQSSK 750

Query: 221  NYKFGPFAPVNVSTTRPSGSNNDKQLHDWESLALTHSPQYHNQALRDLFGHYMEAWSSWY 42
            +Y+FGPFAPV+V  T        +Q+ DWESLA T+ PQYH+QALRDLF HYMEAW +WY
Sbjct: 751  SYQFGPFAPVSVQDT-------VRQVRDWESLASTYRPQYHSQALRDLFAHYMEAWKTWY 803

Query: 41   AEVAGKNPIKLS 6
            +EVAGK PI++S
Sbjct: 804  SEVAGKEPIQIS 815



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 41/114 (35%), Positives = 56/114 (49%)
 Frame = -3

Query: 713 NRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAHDLSMMRTKVRRLYDIANVLS 534
           +RK+KSLGLL  NF+ L+    VE I LD+AA          S +  + RR+YDI NVL 
Sbjct: 458 SRKQKSLGLLCSNFLSLYNRDGVEPIGLDDAA----------SRLGVERRRIYDIVNVLE 507

Query: 533 SMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSFETKKRTFGTELTNTSVK 372
           S+  + +       K  + W G G  PK     +L  E  +  F T  +N S K
Sbjct: 508 SVGVLAR-----KAKNQYSWKGFGAIPK--ALEELREEGLRENFHTFDSNNSAK 554


>ref|XP_002280411.1| PREDICTED: E2F transcription factor-like E2FE-like [Vitis vinifera]
          Length = 382

 Score =  386 bits (992), Expect = e-105
 Identities = 209/377 (55%), Positives = 268/377 (71%), Gaps = 6/377 (1%)
 Frame = -3

Query: 1118 RRCVGTGVLCIVLCSFLSLYDRDGVETIGLDDAAARLGVERRRIYDIVNVLESIGLLTKK 939
            R+    G+LC    +FLSLY+RDGVE IGLDDAA+RLGVERRRIYDIVNVLES+G+L +K
Sbjct: 20   RKQKSLGLLC---SNFLSLYNRDGVEPIGLDDAASRLGVERRRIYDIVNVLESVGVLARK 76

Query: 938  AKNRYSWKGFGVIPKTLQLLKQEGLKESYTAFEDSFTEELSNEDKYEDLQLSNNSSQNEX 759
            AKN+YSWKGFG IPK L+ L++EGL+E++  F+ + + ++S +D+ E     N  SQ + 
Sbjct: 77   AKNQYSWKGFGAIPKALEELREEGLRENFHTFDSNNSAKIS-DDEDERFSNPNTGSQQDK 135

Query: 758  XXXXXXXXXXXXXS-----DNRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAH 594
                               DNR+EKSLGLLTQNFVKLFLCS+V++ISL+EAA+ILLGD  
Sbjct: 136  SNPSSVLKPSKLNLNVFFTDNRREKSLGLLTQNFVKLFLCSNVDLISLEEAARILLGDGQ 195

Query: 593  DLSMMRTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSF-ET 417
            + S+MRTKVRRLYDIANVLSSMN IEKT+  E RKPAFRWLGM GK +  + + L+  E+
Sbjct: 196  NSSIMRTKVRRLYDIANVLSSMNLIEKTNQTENRKPAFRWLGMRGKSENGSLSVLNLNES 255

Query: 416  KKRTFGTELTNTSVKRCRVAPSVNATTDQATIPSQTQGECTTAXXXXXXXVGVNDLEKGS 237
            KKRTFGTE+TN S KR ++A SV   ++Q T   + Q +           +  +D EKG 
Sbjct: 256  KKRTFGTEITNISFKRNKMASSVEGNSNQNT---KMQWQMQVKHENLENGIERSDFEKGP 312

Query: 236  IQNVQNYKFGPFAPVNVSTTRPSGSNNDKQLHDWESLALTHSPQYHNQALRDLFGHYMEA 57
             Q+ ++Y+FGPFAPV+V  T        +Q+ DWESLA T+ PQYH+QALRDLF HYMEA
Sbjct: 313  KQSSKSYQFGPFAPVSVQDT-------VRQVRDWESLASTYRPQYHSQALRDLFAHYMEA 365

Query: 56   WSSWYAEVAGKNPIKLS 6
            W +WY+EVAGK PI++S
Sbjct: 366  WKTWYSEVAGKEPIQIS 382



 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 41/114 (35%), Positives = 56/114 (49%)
 Frame = -3

Query: 713 NRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAHDLSMMRTKVRRLYDIANVLS 534
           +RK+KSLGLL  NF+ L+    VE I LD+AA          S +  + RR+YDI NVL 
Sbjct: 19  SRKQKSLGLLCSNFLSLYNRDGVEPIGLDDAA----------SRLGVERRRIYDIVNVLE 68

Query: 533 SMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSFETKKRTFGTELTNTSVK 372
           S+  + +       K  + W G G  PK     +L  E  +  F T  +N S K
Sbjct: 69  SVGVLAR-----KAKNQYSWKGFGAIPK--ALEELREEGLRENFHTFDSNNSAK 115


>ref|XP_002511465.1| E2F, putative [Ricinus communis] gi|223550580|gb|EEF52067.1| E2F,
            putative [Ricinus communis]
          Length = 389

 Score =  368 bits (944), Expect = 2e-99
 Identities = 199/375 (53%), Positives = 254/375 (67%), Gaps = 6/375 (1%)
 Frame = -3

Query: 1118 RRCVGTGVLCIVLCSFLSLYDRDGVETIGLDDAAARLGVERRRIYDIVNVLESIGLLTKK 939
            R+    G+LC    +FLSLYD+DG+E IGLDDAA++LGVERRRIYDIVNVLES+G+L++K
Sbjct: 21   RKQKSLGLLCT---NFLSLYDKDGIEVIGLDDAASKLGVERRRIYDIVNVLESVGVLSRK 77

Query: 938  AKNRYSWKGFGVIPKTLQLLKQEGLKESYTAFED----SFTEELSNE--DKYEDLQLSNN 777
            AKN+Y+WKGFG IPK LQ LK+EGLKE+ ++F++    +  E+ S++  D  +D   + N
Sbjct: 78   AKNKYTWKGFGAIPKALQELKEEGLKENLSSFDNKQPSNNCEKASDDENDDEDDCDSNPN 137

Query: 776  SSQNEXXXXXXXXXXXXXXSDNRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDA 597
            +                   DNRKEKSLGLLTQNFVKLFLCS  ++ISLDEAAK+LLGDA
Sbjct: 138  TGSQNSIPSGISKSTAASRFDNRKEKSLGLLTQNFVKLFLCSKADLISLDEAAKLLLGDA 197

Query: 596  HDLSMMRTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSFET 417
            H+ S+MRTKVRRLYDIANVLSS+  IEKTH  E+RKPAFRWLG+  K +  +   L+ E+
Sbjct: 198  HNSSIMRTKVRRLYDIANVLSSLKLIEKTHTAESRKPAFRWLGLRVKSESGSADALA-ES 256

Query: 416  KKRTFGTELTNTSVKRCRVAPSVNATTDQATIPSQTQGECTTAXXXXXXXVGVNDLEKGS 237
            +KR FG ++TN  +KR +V  S        ++    Q +               D ++GS
Sbjct: 257  RKRRFGVDVTNICIKRNKVDGSSADADKSESLKMHGQIKVEDVLTIADRSSVGQDAQQGS 316

Query: 236  IQNVQNYKFGPFAPVNVSTTRPSGSNNDKQLHDWESLALTHSPQYHNQALRDLFGHYMEA 57
                ++Y+FGPFAPV V+    S  N     HDWESLA T+ PQYHNQALR+LF HYMEA
Sbjct: 317  ----KSYQFGPFAPVTVAKLGDS-ENKQTPTHDWESLAATYRPQYHNQALRELFAHYMEA 371

Query: 56   WSSWYAEVAGKNPIK 12
            W SWY EVAGK PI+
Sbjct: 372  WKSWYTEVAGKKPIE 386


>ref|XP_004157798.1| PREDICTED: E2F transcription factor-like E2FE-like [Cucumis sativus]
          Length = 381

 Score =  362 bits (928), Expect = 1e-97
 Identities = 198/371 (53%), Positives = 256/371 (69%)
 Frame = -3

Query: 1118 RRCVGTGVLCIVLCSFLSLYDRDGVETIGLDDAAARLGVERRRIYDIVNVLESIGLLTKK 939
            R+    G+LC    +FLSLY+ DGV +IGLDDAA+RLGVERRRIYDIVNVLES+G+L++K
Sbjct: 23   RKQKSLGLLC---SNFLSLYNHDGVHSIGLDDAASRLGVERRRIYDIVNVLESVGVLSRK 79

Query: 938  AKNRYSWKGFGVIPKTLQLLKQEGLKESYTAFEDSFTEELSNEDKYEDLQLSNNSSQNEX 759
            AKN+YSW GFG IPK LQ LK+EGL+E+ +A + +   ++S +D+ ED + SN +     
Sbjct: 80   AKNQYSWNGFGAIPKALQDLKEEGLRENCSASDGNDYAKVS-DDEDEDERFSNPTGSQTS 138

Query: 758  XXXXXXXXXXXXXSDNRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAHDLSMM 579
                         +DNR+EKSL LLTQNFVKLF+CS V MISLDEAAK+LLGD H+ S+M
Sbjct: 139  TAAVPKSSSSSLKADNRREKSLALLTQNFVKLFICSHVNMISLDEAAKLLLGDGHNSSIM 198

Query: 578  RTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSFETKKRTFG 399
            RTKVRRLYDIANVLSSMN IEKTH  +TRKPAFRWLG+ GK K   T  L  E++KR FG
Sbjct: 199  RTKVRRLYDIANVLSSMNLIEKTHTTDTRKPAFRWLGVRGKVKNEPT--LLPESRKRAFG 256

Query: 398  TELTNTSVKRCRVAPSVNATTDQATIPSQTQGECTTAXXXXXXXVGVNDLEKGSIQNVQN 219
            T++TN S K+ +   S     +   +  Q   +C  +           + E+ S    ++
Sbjct: 257  TDVTNVSYKKTKAENSAYQGFNHC-LNMQKLVQCDNSSQEDSQNSQDQECERTS----KS 311

Query: 218  YKFGPFAPVNVSTTRPSGSNNDKQLHDWESLALTHSPQYHNQALRDLFGHYMEAWSSWYA 39
            Y+FGPFAPV+V+      +NN K+ HDWE+L+ T  PQYHNQAL++LF HY+EAW SWY+
Sbjct: 312  YQFGPFAPVSVAKVGVLDNNNVKRTHDWENLSSTFRPQYHNQALKELFSHYVEAWKSWYS 371

Query: 38   EVAGKNPIKLS 6
            E A K PI++S
Sbjct: 372  E-AVKKPIQIS 381


>ref|XP_003525157.1| PREDICTED: E2F transcription factor-like E2FE-like [Glycine max]
          Length = 381

 Score =  357 bits (917), Expect = 2e-96
 Identities = 198/374 (52%), Positives = 250/374 (66%), Gaps = 4/374 (1%)
 Frame = -3

Query: 1118 RRCVGTGVLCIVLCSFLSLYDRDGVETIGLDDAAARLGVERRRIYDIVNVLESIGLLTKK 939
            R+    G+LC    +FLSLYDR  V  IGLDDAA RLGVERRRIYDIVNVLESIGLL++K
Sbjct: 16   RKQKSLGLLCT---NFLSLYDRGSVHLIGLDDAAIRLGVERRRIYDIVNVLESIGLLSRK 72

Query: 938  AKNRYSWKGFGVIPKTLQLLKQEGLKESYTAFEDSFTEE---LSNEDKYEDLQLSNNSSQ 768
            AKN+Y W+GF  IP TLQ LK+EGLK++      S  +      +ED  E L      SQ
Sbjct: 73   AKNQYIWRGFVAIPHTLQELKEEGLKDNSNFLRGSGNDNDKVSDDEDDEETLSNPATGSQ 132

Query: 767  NEXXXXXXXXXXXXXXSDNRKEKSLGLLTQNFVKLFLCSDVEMISLDEAAKILLGDAHDL 588
            ++              ++NR+EKSL LLTQNFVKLF+CS+VE+ISLDEAAK+LLGDAH+ 
Sbjct: 133  SDKLNPNSSTLTKSLKNENRREKSLALLTQNFVKLFVCSNVELISLDEAAKLLLGDAHNT 192

Query: 587  SMMRTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGMGGKPKMATTTDLSF-ETKK 411
            S+MRTKVRRLYDIANVLSSMN IEKTH  +TRKPAFRWLG  GK    T    +  E++K
Sbjct: 193  SVMRTKVRRLYDIANVLSSMNLIEKTHTTDTRKPAFRWLGSEGKTWNETLHKSNLNESRK 252

Query: 410  RTFGTELTNTSVKRCRVAPSVNATTDQATIPSQTQGECTTAXXXXXXXVGVNDLEKGSIQ 231
            R FG+++TN S +R  V    N   D    P + + E  +           N+L++G+ Q
Sbjct: 253  RAFGSDITNISFERNNVELFTNG--DSNPNPKKPRMEYGSGLGQADE----NNLKQGTKQ 306

Query: 230  NVQNYKFGPFAPVNVSTTRPSGSNNDKQLHDWESLALTHSPQYHNQALRDLFGHYMEAWS 51
              +NY+FGPFAP  V     S +NN KQ+H W+SLA  +SPQY N+ALR+L+ HYMEAW 
Sbjct: 307  ASKNYQFGPFAPACVPKVGASENNNLKQVHGWDSLATANSPQYQNEALRELYSHYMEAWK 366

Query: 50   SWYAEVAGKNPIKL 9
            SWY+E+AGK  +++
Sbjct: 367  SWYSEIAGKRSLQI 380


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