BLASTX nr result

ID: Bupleurum21_contig00016992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016992
         (1112 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   122   2e-25
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   120   5e-25
ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811...   112   2e-22
ref|XP_002521085.1| DNA binding protein, putative [Ricinus commu...   111   3e-22
ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   107   7e-21

>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  122 bits (305), Expect = 2e-25
 Identities = 95/275 (34%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
 Frame = -1

Query: 1112 QLHPMSSQQSHVLTNAHHPHLQGPNVANNSQHQAYVIRIAKEKXXXXXXXXXXXXXXQFA 933
            Q H MSSQQSHVL N HHPHLQGPN   ++Q QAY +R+AKE+               FA
Sbjct: 1520 QQHQMSSQQSHVLGNPHHPHLQGPNHTTSTQ-QAYAMRVAKERQLQHRMLHQQQQ---FA 1575

Query: 932  ASNVLMPNVQGXXXXXXXXXXXXXXXXXXXXXXXXXP--LATSSAISPMSXXXXXXXXXX 759
            +SN LMP+VQ                             L  SS ++P+S          
Sbjct: 1576 SSNNLMPHVQPQPQLPMSSSVQNSSQIHSQTSQPVTLPPLTASSPMTPISSQEQQKHHLP 1635

Query: 758  XI-VGGNPQVSGSGLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKILKGLGR 582
               +  NPQ++ SGLTN                                   K+LKG GR
Sbjct: 1636 PHGLNRNPQINASGLTNQIGKPRQRQPQQQFQQTGRHHPQQRQQSQSQQQ-AKLLKGTGR 1694

Query: 581  GNM-MHQNLPTDNTLPNGPSNTSGSQTVEKGERSVNMIHGKGLCSGPGINSFQGPKQSIP 405
            GNM MH +L  D +  NG S   GS   EKGE+ ++M+ G+ L SG G+N  Q  K  +P
Sbjct: 1695 GNMLMHHSLSVDPSHLNGLSTAPGSHATEKGEQVMHMMQGQSLYSGSGVNPVQPAKPLVP 1754

Query: 404  SHISHSLQPQQKMYSGQTTSSKQHQQTIGNSEGSN 300
               + S +P         TSSKQ QQ   +S+ SN
Sbjct: 1755 QSATQSQRP-------APTSSKQLQQMPPHSDNSN 1782


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  120 bits (302), Expect = 5e-25
 Identities = 94/275 (34%), Positives = 122/275 (44%), Gaps = 4/275 (1%)
 Frame = -1

Query: 1112 QLHPMSSQQSHVLTNAHHPHLQGPNVANNSQHQAYVIRIAKEKXXXXXXXXXXXXXXQFA 933
            Q H MSSQQSHVL N HHPHLQGPN   ++Q QAY +R+AKE+               FA
Sbjct: 1536 QQHQMSSQQSHVLGNPHHPHLQGPNHTTSTQ-QAYAMRVAKERQLQQRMLHQQQQ---FA 1591

Query: 932  ASNVLMPNVQGXXXXXXXXXXXXXXXXXXXXXXXXXP--LATSSAISPMSXXXXXXXXXX 759
            +SN LMP+VQ                             L  SS ++P+S          
Sbjct: 1592 SSNNLMPHVQPQPQLPMSSSVQNSSQIHSQTSQPVTLPPLTASSPMTPISSQEQQKHHLP 1651

Query: 758  XI-VGGNPQVSGSGLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKILKGLGR 582
               +  NPQ++ SGLTN                                   K+LKG GR
Sbjct: 1652 PHGLNRNPQINASGLTNQIGKPRQRQPQQQFQQTGRHHPQQRQQSQSQQQ-AKLLKGTGR 1710

Query: 581  GNMM-HQNLPTDNTLPNGPSNTSGSQTVEKGERSVNMIHGKGLCSGPGINSFQGPKQSIP 405
            GNM+ H +L  D +  NG S   GS   EKGE+ ++M+ G+ L SG G+N  Q  K  +P
Sbjct: 1711 GNMLIHHSLSVDPSHLNGLSTAPGSHATEKGEQVMHMMQGQSLYSGSGVNPVQPAKPLVP 1770

Query: 404  SHISHSLQPQQKMYSGQTTSSKQHQQTIGNSEGSN 300
               + S +P         TSSKQ QQ   +S+ SN
Sbjct: 1771 QSATQSQRP-------APTSSKQLQQMPPHSDNSN 1798


>ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811365 [Glycine max]
          Length = 1979

 Score =  112 bits (279), Expect = 2e-22
 Identities = 92/265 (34%), Positives = 120/265 (45%), Gaps = 6/265 (2%)
 Frame = -1

Query: 1112 QLHPMSSQQSHVLTNAHHPHLQGPNVANNSQHQAYVIRIAKEKXXXXXXXXXXXXXXQFA 933
            Q H +S QQSH L+N   PHLQGP+ A NSQ QAY +R+AKE+                 
Sbjct: 1480 QPHQLSQQQSH-LSNPR-PHLQGPSHATNSQQQAYAVRLAKERQLQQRYLQHQQQ---LV 1534

Query: 932  ASNVLMPNVQGXXXXXXXXXXXXXXXXXXXXXXXXXP----LATSSAISPMSXXXXXXXX 765
            ASN L+P+VQ                               L  SS ++PMS        
Sbjct: 1535 ASNALIPHVQAKSQLPISSLPLQNSSQVQSQNSPQQVPLSPLTPSSPLTPMSSQLQQQKL 1594

Query: 764  XXXIVGGNPQVSGSGLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKILKGLG 585
                 G +   + SGLTN                                 Q K+LKG+G
Sbjct: 1595 HHIQPGFSRNPTASGLTNQAAKQRPRHPPQQQYQQPSRQHPSQRHDVQSQQQTKLLKGMG 1654

Query: 584  RGNMM-HQNLPTDNTLPNGPSNTSGSQTVEKGERSVNMIHGKGLCSGPGINSFQGPKQSI 408
            RGNM+ HQNL  D T  +G S  +GSQT EKG++ ++M+ G+ L  G G+N  Q  K   
Sbjct: 1655 RGNMLVHQNLSVD-TSQSGLSLPAGSQTGEKGDQILHMMQGQNLYPGSGLNPNQPSKPLG 1713

Query: 407  PSHISHSLQPQQKMYSGQ-TTSSKQ 336
             +H S+  Q QQK++SG  TTSSKQ
Sbjct: 1714 HAHSSNHSQLQQKLHSGSPTTSSKQ 1738


>ref|XP_002521085.1| DNA binding protein, putative [Ricinus communis]
            gi|223539654|gb|EEF41236.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2009

 Score =  111 bits (278), Expect = 3e-22
 Identities = 90/278 (32%), Positives = 120/278 (43%), Gaps = 8/278 (2%)
 Frame = -1

Query: 1112 QLHPMSSQQSHVLTNAHHPHLQGPNVANNSQHQAYVIRIAKEKXXXXXXXXXXXXXXQFA 933
            Q H +  QQSHV++N   PH+QG N    SQ QAY +R+AKE+               FA
Sbjct: 1491 QQHQLPPQQSHVMSN---PHIQGTNQTTGSQQQAYAMRVAKERHMQQRLLQQQQQQQ-FA 1546

Query: 932  ASNVLMPNVQGXXXXXXXXXXXXXXXXXXXXXXXXXPLATSSAISPMSXXXXXXXXXXXI 753
            AS  LM +VQ                           L   +  SPM+            
Sbjct: 1547 ASGALMSHVQSQPQHSIPSSMQNSSQIQPQTSSQPVSLPPLTPSSPMTPISVQQQQQKHA 1606

Query: 752  -----VGGNPQVSGSGLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-VKILKG 591
                 +  N Q   SGLTN                                 Q  K+LKG
Sbjct: 1607 LPHHGISRNSQTVASGLTNQMGKQRPRQLQQHQQFQQSGRIHPPQRQHSQSPQQAKLLKG 1666

Query: 590  LGRGNMM-HQNLPTDNTLPNGPSNTSGSQTVEKGERSVNMIHGKGLCSGPGINSFQGPKQ 414
            +GRGNMM HQNL TD++  NG S   G+Q+ EKGE  ++++ G+GL SG G+NS Q  K 
Sbjct: 1667 MGRGNMMVHQNLSTDHSPLNGLSVPPGNQSAEKGEHIMHLMQGQGLYSGSGLNSIQPSKP 1726

Query: 413  SIPSHISHSLQPQQKMYS-GQTTSSKQHQQTIGNSEGS 303
             + S   +  Q QQK++S     SSKQ QQ   +++ S
Sbjct: 1727 LVTSQSPNHSQSQQKLFSAAPPPSSKQLQQISSHADHS 1764


>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
            gi|222844768|gb|EEE82315.1| hypothetical protein
            POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  107 bits (266), Expect = 7e-21
 Identities = 87/278 (31%), Positives = 119/278 (42%), Gaps = 8/278 (2%)
 Frame = -1

Query: 1112 QLHPMSSQQSHVLTNAHHPHLQGPNVANNSQHQAYVIRIAKEKXXXXXXXXXXXXXXQFA 933
            Q H M +QQS++L+N HHP+L+GPN A  +   A      ++                F+
Sbjct: 1501 QQHQMPAQQSNMLSNPHHPNLRGPNQATAAASPAAAAAQQQQH---------------FS 1545

Query: 932  ASNVLMPNVQGXXXXXXXXXXXXXXXXXXXXXXXXXPLATSSAISPMSXXXXXXXXXXXI 753
            AS+ LMP+VQ                           L   +  SPM+            
Sbjct: 1546 ASSALMPHVQHQSQLPISSSMQNSSQISPPSASQPVSLPAITPPSPMTPISMQQQQQQKH 1605

Query: 752  ------VGGNPQVSGSGLTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVKILKG 591
                  V  +PQ   SGLTN                                   K+LKG
Sbjct: 1606 NLPHHAVSRSPQSGSSGLTNQMGKQRQRQPQQFQQSGRHHPQQRQHSQSPQQ--AKLLKG 1663

Query: 590  LGRGNMM-HQNLPTDNTLPNGPSNTSGSQTVEKGERSVNMIHGKGLCSGPGINSFQGPKQ 414
            +GRGNM+ HQNLP D++  NG S   G+  VEKGE+ ++++ G+GL SG G++     K 
Sbjct: 1664 MGRGNMVVHQNLPNDHSPLNGLSVPPGNHGVEKGEQIMHLMQGQGLYSGTGLSPIHTSKP 1723

Query: 413  SIPSHISHSLQPQQKMYSGQTT-SSKQHQQTIGNSEGS 303
              PS   +  QPQQK+YSG TT SSK  QQ   + E S
Sbjct: 1724 LGPSQSPNHSQPQQKLYSGPTTPSSKPLQQMPSHLESS 1761


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