BLASTX nr result

ID: Bupleurum21_contig00016956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016956
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               260   3e-67
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   247   3e-63
emb|CCH50954.1| T1.2 [Malus x robusta]                                211   3e-52
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   199   6e-49
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   191   3e-46

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  260 bits (665), Expect = 3e-67
 Identities = 144/315 (45%), Positives = 182/315 (57%), Gaps = 5/315 (1%)
 Frame = +1

Query: 1    NQMWISMATTIXXXXXXXXXXXXXXXXXXXEAWWWNEEVQNKVKAKQ----ALFKDLLSV 168
            +QMW SMA+ I                   E+WWWNEEVQ KVKAK+    AL+KD    
Sbjct: 387  SQMWDSMASCIRKVAKEVLGESKGFAPHQKESWWWNEEVQTKVKAKKECCKALYKDRTDE 446

Query: 169  SAGVERNVLNXXXXXXXXXXXXXXXXXXXXXXXXMYKQLDTREGANGIFKLAKARERGRR 348
            +    R                            MYK+LDT+EG   I+KLA+ARE+  R
Sbjct: 447  NGERYRKAKQEAKKAVREAKLAAYDD--------MYKRLDTKEGELDIYKLARAREKKTR 498

Query: 349  DLGNVRFVKNELGQVLVKDDAIKERWNRYFYNLFNETRGSETGVVQAGSFSPARPNTPAV 528
            DL  VR +K+E G+VL  ++A+K+RW  YF+NLFNE       + +  +    R  +   
Sbjct: 499  DLNQVRCIKDEDGKVLATENAVKDRWRGYFHNLFNEGHERSASLWELSNSEECRNYSFYR 558

Query: 529  SISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFN-ILRDTKMPAEWRR 705
             I  EEV  AL+KM   KA+GPD IPIEVW  LG+ G  WL  LFN IL+  KMP EWR 
Sbjct: 559  RIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVLGETGITWLTDLFNRILKTKKMPNEWRT 618

Query: 706  SIVVPFFKNKGDAQSCSNYRGIKLLSHTMKLWXXXXXXXXXXXXXXSENQFGFMPGRSTI 885
            S +VP +KNKGD Q+C NYRGIKL+SHTMKLW              S+NQFGFMPGRST+
Sbjct: 619  STLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWERVIEHRLRQETRVSDNQFGFMPGRSTM 678

Query: 886  EAIHLIRRLMEKFRE 930
            EAI+L+RRLME++R+
Sbjct: 679  EAIYLLRRLMERYRD 693


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  247 bits (630), Expect = 3e-63
 Identities = 132/281 (46%), Positives = 170/281 (60%), Gaps = 1/281 (0%)
 Frame = +1

Query: 91  EAWWWNEEVQNKVKAKQALFKDLLSVSAGVERNVLNXXXXXXXXXXXXXXXXXXXXXXXX 270
           E+WWWNEEV+ K +  +AL+KD    +    R                            
Sbjct: 25  ESWWWNEEVKAKKECCKALYKDRTDENGERYRKAKQEAKKAVREAKLAAYDD-------- 76

Query: 271 MYKQLDTREGANGIFKLAKARERGRRDLGNVRFVKNELGQVLVKDDAIKERWNRYFYNLF 450
           MYK+LDT+EG   I+KLA+ARE+  RDL  VR +K+E G+VL  ++A+K++W  YF+NLF
Sbjct: 77  MYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNLF 136

Query: 451 NETRGSETGVVQAGSFSPARPNTPAVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLCLG 630
           NE       + +  +    R  +    I  EEV  AL+KM   KAVGPD IPIEVW  LG
Sbjct: 137 NEGHERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIEVWKVLG 196

Query: 631 DAGAQWLAVLFN-ILRDTKMPAEWRRSIVVPFFKNKGDAQSCSNYRGIKLLSHTMKLWXX 807
           + G  WL  LFN IL+  KMP EWR S +VP +KNKGD Q+C NYRGIKL+SHTMKLW  
Sbjct: 197 ETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGDVQNCMNYRGIKLMSHTMKLWER 256

Query: 808 XXXXXXXXXXXXSENQFGFMPGRSTIEAIHLIRRLMEKFRE 930
                       S+NQFGFMPGRST+EAI+L+RRLME++R+
Sbjct: 257 VIEHRLRQETRVSDNQFGFMPGRSTMEAIYLLRRLMERYRD 297


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  211 bits (536), Expect = 3e-52
 Identities = 126/283 (44%), Positives = 159/283 (56%), Gaps = 5/283 (1%)
 Frame = +1

Query: 97  WWWNEEVQNKVKAKQ----ALFKDLLSVSAGVERNVLNXXXXXXXXXXXXXXXXXXXXXX 264
           WWWNEEVQ KVKAK+    AL+KD+   +    R                          
Sbjct: 64  WWWNEEVQTKVKAKKECCKALYKDMTDENGERYRRAKQEAK------------------- 104

Query: 265 XXMYKQLDTREGANGIFKLAKARERGRRDLGNVRFVKNELGQVLVKDDAIKERWNRYFYN 444
               K LD       I+KLAK RE+  RDL  VR +K+E G+VL  ++A+K+R   YF+N
Sbjct: 105 ----KALD-------IYKLAKVREKKTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHN 153

Query: 445 LFNETRGSETGVVQAGSFSPARPNTPAVSISMEEVKGALQKMGRAKAVGPDQIPIEVWLC 624
           LFNE     T + +  +    R       I  EEV  AL+KM   KAVGP+ IPI+VW  
Sbjct: 154 LFNEGHEWSTSLGELSNSEEYRNYFFYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKV 213

Query: 625 LGDAGAQWLAVLFN-ILRDTKMPAEWRRSIVVPFFKNKGDAQSCSNYRGIKLLSHTMKLW 801
           LG+ G  WL  LFN IL+  KM  EWR S +VP +KNKGD Q+C NYRGIKL+SHTMKL 
Sbjct: 214 LGETGITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGDIQNCMNYRGIKLMSHTMKLL 273

Query: 802 XXXXXXXXXXXXXXSENQFGFMPGRSTIEAIHLIRRLMEKFRE 930
                         S+NQF FMPG ST+EAI+L+R+LMEK+R+
Sbjct: 274 ARVIEHRLRQKTRVSDNQFKFMPGCSTMEAIYLLRKLMEKYRD 316


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  199 bits (507), Expect = 6e-49
 Identities = 121/309 (39%), Positives = 157/309 (50%), Gaps = 2/309 (0%)
 Frame = +1

Query: 7   MWISMATTIXXXXXXXXXXXXXXXXXXXEAWWWNEEVQNKVKAKQALFKDLLSVSAGVER 186
           MW  MA  I                   E+WWWN+ VQ+KV+ K+  FKD         +
Sbjct: 1   MWERMAHEIKKVAKETLGESRGFGPRGKESWWWNDNVQSKVRIKRDCFKDWSRC-----K 55

Query: 187 NVLNXXXXXXXXXXXXXXXXXXXXXXXX-MYKQLDTREGANGIFKLAKARERGRRDLGNV 363
           NV                           +Y+ L T+EG   I+KL+K RER  RDL  V
Sbjct: 56  NVETWDKYKIARKEAKKVVSEARTQAFEGLYQSLGTKEGEKSIYKLSKGRERKTRDLDQV 115

Query: 364 RFVKNELGQVLVKDDAIKERWNRYFYNLFNETRGSETGVVQAGSFSPARPNTPAVSISME 543
           + +K+E G+VLV+       +N Y                                I   
Sbjct: 116 KCIKDEEGRVLVRHRRGGPNYNYYR------------------------------RIQEH 145

Query: 544 EVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLFN-ILRDTKMPAEWRRSIVVP 720
           EV+ AL++MG  +AVGPD IPIEVW  LGD G  WLA LFN I+R  KM  EWRRS ++P
Sbjct: 146 EVREALKRMGSDEAVGPDNIPIEVWKSLGDRGTVWLANLFNEIIRTKKMSDEWRRSTLIP 205

Query: 721 FFKNKGDAQSCSNYRGIKLLSHTMKLWXXXXXXXXXXXXXXSENQFGFMPGRSTIEAIHL 900
             KNKGD Q+C+NYRGIKL+SHTMKLW              ++NQFGFM GRST+EAI+L
Sbjct: 206 IDKNKGDIQNCANYRGIKLMSHTMKLWERVIKRRLRKETLVTDNQFGFMLGRSTMEAIYL 265

Query: 901 IRRLMEKFR 927
           ++R+ME++R
Sbjct: 266 LQRVMERYR 274


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  191 bits (484), Expect = 3e-46
 Identities = 108/268 (40%), Positives = 144/268 (53%), Gaps = 2/268 (0%)
 Frame = +1

Query: 4    QMWISMATTIXXXXXXXXXXXXXXXXXXXEAWWWNEEVQNKVKAKQALFKDLLSVSAGVE 183
            +MW  MA  I                   E+WWWN  +Q K+K K+  FK+       + 
Sbjct: 787  EMWREMAEVIRRTAKESFGESKGIGPRDKESWWWNASIQEKIKIKRECFKEW-----SLC 841

Query: 184  RNVLNXXXXXXXXXXXXXXXXXXXXXXXX-MYKQLDTREGANGIFKLAKARERGRRDLGN 360
            RNV N                         +Y+ LDT+EG  GI+++AK+RER  RDL  
Sbjct: 842  RNVDNWEKYKAAKKETKVAVSEARTRAYEGLYQSLDTKEGEKGIYRIAKSRERRTRDLDQ 901

Query: 361  VRFVKNELGQVLVKDDAIKERWNRYFYNLFNETRGSETGVVQAGSFSPARPNTPAVSISM 540
            V+ +K++  +VL +++ I ERW  YFY LFNE + +   + +  +    +       I  
Sbjct: 902  VKCIKDKDREVLAQEEKINERWKSYFYELFNEGQKTLPSLGRLCTREEDQNFNYYRRIRD 961

Query: 541  EEVKGALQKMGRAKAVGPDQIPIEVWLCLGDAGAQWLAVLF-NILRDTKMPAEWRRSIVV 717
             EVK AL++M   +AVGPD IPIEVW  LG  G  WL  LF  ILR  KMP EWR+S +V
Sbjct: 962  FEVKEALKQMKNGRAVGPDNIPIEVWKGLGGKGINWLTKLFYEILRSKKMPDEWRKSTLV 1021

Query: 718  PFFKNKGDAQSCSNYRGIKLLSHTMKLW 801
            P ++ KGD QSC NYRGIKL+SHTMKLW
Sbjct: 1022 PIYRIKGDIQSCGNYRGIKLMSHTMKLW 1049


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