BLASTX nr result

ID: Bupleurum21_contig00016939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016939
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]   304   6e-81
ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma...   303   7e-81
ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex pr...   301   3e-80
ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...   301   3e-80
ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|2...   301   3e-80

>emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]
          Length = 557

 Score =  304 bits (778), Expect = 6e-81
 Identities = 153/165 (92%), Positives = 162/165 (98%)
 Frame = +3

Query: 3   GIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDK 182
           GIVVTNDGNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDK
Sbjct: 54  GIVVTNDGNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDK 113

Query: 183 SYHPTVICRAYNKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDLVADL 362
           SYHPTVICRAYNKALEDA+AVL+KIA+SIDV DR  +LGLVKSCIGTKFTSQFGDL+ADL
Sbjct: 114 SYHPTVICRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADL 173

Query: 363 ALDATTTIGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 497
           A+DATTT+GVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM
Sbjct: 174 AIDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 218


>ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|297733798|emb|CBI15045.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  303 bits (777), Expect = 7e-81
 Identities = 151/165 (91%), Positives = 162/165 (98%)
 Frame = +3

Query: 3   GIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDK 182
           GIVVTNDGN+ILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDK
Sbjct: 54  GIVVTNDGNSILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDK 113

Query: 183 SYHPTVICRAYNKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDLVADL 362
           ++HPTVICRAYNKALEDA+AVL+KIA  +DVNDRVAMLG+VKSCIGTKFT QFGDL+ADL
Sbjct: 114 NFHPTVICRAYNKALEDAIAVLDKIAAPVDVNDRVAMLGMVKSCIGTKFTGQFGDLIADL 173

Query: 363 ALDATTTIGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 497
           ALDATTT+GVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM
Sbjct: 174 ALDATTTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 218


>ref|XP_004146724.1| PREDICTED: LOW QUALITY PROTEIN: T-complex protein 1 subunit
           gamma-like [Cucumis sativus]
          Length = 514

 Score =  301 bits (772), Expect = 3e-80
 Identities = 151/165 (91%), Positives = 161/165 (97%)
 Frame = +3

Query: 3   GIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDK 182
           GIVVTNDGNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFI+K
Sbjct: 13  GIVVTNDGNAILRELDIAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIEK 72

Query: 183 SYHPTVICRAYNKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDLVADL 362
           +YHPTVICRAYNKALEDALAVL+KIA+ IDV DR AMLGLVKSCIGTKFTSQFGDL+ADL
Sbjct: 73  NYHPTVICRAYNKALEDALAVLDKIAMDIDVKDRTAMLGLVKSCIGTKFTSQFGDLIADL 132

Query: 363 ALDATTTIGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 497
           A+DATT +GVDLGQG+REVDIKKYIKVEKVPGGQLEDSKVLKGVM
Sbjct: 133 AIDATTIVGVDLGQGVREVDIKKYIKVEKVPGGQLEDSKVLKGVM 177


>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|296084839|emb|CBI27721.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  301 bits (772), Expect = 3e-80
 Identities = 152/165 (92%), Positives = 161/165 (97%)
 Frame = +3

Query: 3   GIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDK 182
           GIVVTNDGNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDK
Sbjct: 54  GIVVTNDGNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDK 113

Query: 183 SYHPTVICRAYNKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDLVADL 362
           SYHPTVICRAYNKALEDA+AVL+KIA+SIDV DR  +LGLVKSCIGTKFTSQFGDL+ADL
Sbjct: 114 SYHPTVICRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADL 173

Query: 363 ALDATTTIGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 497
           A+DAT T+GVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM
Sbjct: 174 AIDATMTVGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 218


>ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|222848309|gb|EEE85856.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  301 bits (772), Expect = 3e-80
 Identities = 152/165 (92%), Positives = 162/165 (98%)
 Frame = +3

Query: 3   GIVVTNDGNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDK 182
           GIVVTNDGNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVL GEMLHVA+AFI+K
Sbjct: 54  GIVVTNDGNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLGGEMLHVAEAFIEK 113

Query: 183 SYHPTVICRAYNKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDLVADL 362
           SYHPTVICRAY+KALEDA+AVL+KIAVSIDVNDR AMLGLVKSCIGTKFTSQFGDL+ADL
Sbjct: 114 SYHPTVICRAYSKALEDAIAVLDKIAVSIDVNDRPAMLGLVKSCIGTKFTSQFGDLIADL 173

Query: 363 ALDATTTIGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVM 497
           A+DAT+T+GVDLGQGLREVDIKKYIKVEKVPG QLEDSKVLKGVM
Sbjct: 174 AIDATSTVGVDLGQGLREVDIKKYIKVEKVPGSQLEDSKVLKGVM 218


Top