BLASTX nr result

ID: Bupleurum21_contig00016921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016921
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19356.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_002285490.1| PREDICTED: uncharacterized protein LOC100259...   158   1e-36
ref|XP_002882770.1| hypothetical protein ARALYDRAFT_478581 [Arab...   152   7e-35
ref|XP_002510042.1| conserved hypothetical protein [Ricinus comm...   152   7e-35
ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|2...   152   9e-35

>emb|CBI19356.3| unnamed protein product [Vitis vinifera]
          Length = 151

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/95 (84%), Positives = 90/95 (94%)
 Frame = +2

Query: 434 RPRLLDFVSSLDEDLVRSTSEKAFRSLPDLSKAISELTKLKGVGPATASAVLAAYAPEVA 613
           RPRLLDFVSSLDE LV+S S+KAF+SLPD+SKAISELT LKGVGPATASA+LAAYAP+VA
Sbjct: 11  RPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATASALLAAYAPDVA 70

Query: 614 PFMSDEAMVAALGNSKDYTLKQYLVLVEKLQDKSK 718
           PFMSDEAMVAALGNSKDYTLKQYLV  +KLQ+K++
Sbjct: 71  PFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKAR 105


>ref|XP_002285490.1| PREDICTED: uncharacterized protein LOC100259164 [Vitis vinifera]
          Length = 213

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/95 (84%), Positives = 90/95 (94%)
 Frame = +2

Query: 434 RPRLLDFVSSLDEDLVRSTSEKAFRSLPDLSKAISELTKLKGVGPATASAVLAAYAPEVA 613
           RPRLLDFVSSLDE LV+S S+KAF+SLPD+SKAISELT LKGVGPATASA+LAAYAP+VA
Sbjct: 73  RPRLLDFVSSLDEALVKSASQKAFQSLPDISKAISELTVLKGVGPATASALLAAYAPDVA 132

Query: 614 PFMSDEAMVAALGNSKDYTLKQYLVLVEKLQDKSK 718
           PFMSDEAMVAALGNSKDYTLKQYLV  +KLQ+K++
Sbjct: 133 PFMSDEAMVAALGNSKDYTLKQYLVFADKLQNKAR 167


>ref|XP_002882770.1| hypothetical protein ARALYDRAFT_478581 [Arabidopsis lyrata subsp.
           lyrata] gi|297328610|gb|EFH59029.1| hypothetical protein
           ARALYDRAFT_478581 [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score =  152 bits (384), Expect = 7e-35
 Identities = 75/95 (78%), Positives = 87/95 (91%)
 Frame = +2

Query: 434 RPRLLDFVSSLDEDLVRSTSEKAFRSLPDLSKAISELTKLKGVGPATASAVLAAYAPEVA 613
           RPRLLDFVSSL++ +V+S SEKAF+SLPD+SKA+ ELT LKGVGPATASAVLAAYAP++A
Sbjct: 75  RPRLLDFVSSLEDSVVKSASEKAFKSLPDISKAVKELTVLKGVGPATASAVLAAYAPDIA 134

Query: 614 PFMSDEAMVAALGNSKDYTLKQYLVLVEKLQDKSK 718
           PFMSDEAM  ALGNSKDY+LKQYL+ V KLQDK+K
Sbjct: 135 PFMSDEAMEVALGNSKDYSLKQYLLFVTKLQDKAK 169


>ref|XP_002510042.1| conserved hypothetical protein [Ricinus communis]
           gi|223550743|gb|EEF52229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 217

 Score =  152 bits (384), Expect = 7e-35
 Identities = 76/95 (80%), Positives = 89/95 (93%)
 Frame = +2

Query: 434 RPRLLDFVSSLDEDLVRSTSEKAFRSLPDLSKAISELTKLKGVGPATASAVLAAYAPEVA 613
           RPRLLD+VSSLDE++V+S S+KAF+SLPD+SKA++ELT LKGVGPATASAVLAAYAP+VA
Sbjct: 73  RPRLLDYVSSLDEEIVKSASQKAFQSLPDVSKAVTELTVLKGVGPATASAVLAAYAPDVA 132

Query: 614 PFMSDEAMVAALGNSKDYTLKQYLVLVEKLQDKSK 718
           PFMSDEAM AALG+SKDYTLKQYL  V+KLQ K+K
Sbjct: 133 PFMSDEAMEAALGSSKDYTLKQYLSFVDKLQTKAK 167


>ref|XP_002302384.1| predicted protein [Populus trichocarpa] gi|222844110|gb|EEE81657.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  152 bits (383), Expect = 9e-35
 Identities = 78/95 (82%), Positives = 85/95 (89%)
 Frame = +2

Query: 434 RPRLLDFVSSLDEDLVRSTSEKAFRSLPDLSKAISELTKLKGVGPATASAVLAAYAPEVA 613
           RPRLLDFVSSLDE  V+S S+KAF SLPD+SKA+S LT LKGVGPATASAVLAAYAP+VA
Sbjct: 73  RPRLLDFVSSLDESHVKSASQKAFESLPDVSKAVSALTVLKGVGPATASAVLAAYAPDVA 132

Query: 614 PFMSDEAMVAALGNSKDYTLKQYLVLVEKLQDKSK 718
           PFMSDEAM A LGNSKDYTLKQYL+ V+KLQ KSK
Sbjct: 133 PFMSDEAMEAVLGNSKDYTLKQYLLFVDKLQTKSK 167


Top