BLASTX nr result

ID: Bupleurum21_contig00016898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016898
         (1602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]   153   1e-34
ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-contai...   140   7e-31
emb|CBI34361.3| unnamed protein product [Vitis vinifera]              140   7e-31
emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera]   136   2e-29
ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|2...   133   2e-28

>emb|CAN79179.1| hypothetical protein VITISV_016730 [Vitis vinifera]
          Length = 242

 Score =  153 bits (387), Expect = 1e-34
 Identities = 85/172 (49%), Positives = 107/172 (62%), Gaps = 12/172 (6%)
 Frame = -1

Query: 801 RLPIPIGHHFQADVPEWSDV-------SLNGNLFSSKCLGTKVWPIEKRNVTTLRA--VG 649
           +L IPIG  FQA+VPEW  V         +    +S+ LGTK WPIE  ++T   A  +G
Sbjct: 25  QLAIPIGSLFQAEVPEWIGVPNKHHPCDKDDASDTSRWLGTKSWPIEGSSITNSDADKIG 84

Query: 648 KGRPSSCSCASPGSTTCVRHHILEKNHLLQSDLGPLYHIWNFDEMGEE-YSKSWTVKEQG 472
            GRP SCSC SPGS  CV+ HI EK+  LQ DLGP +  WNF  MGEE   +SWT KEQ 
Sbjct: 85  NGRPDSCSCTSPGSAKCVKFHIQEKSAELQQDLGPAFRDWNFHTMGEEAVLRSWTAKEQR 144

Query: 471 RFDVLAKRQ--SSRTNLLQNAMQCFPSKCRKEIFSYYFNVFIPRFMSVQTRS 322
           +F+ L K    S   + L+ A++ FPSK RK+I SYY NVF+PR +S  TR+
Sbjct: 145 KFETLVKGHPPSQHKSFLKPAIEXFPSKSRKDIVSYYCNVFVPRRISKLTRA 196


>ref|XP_002273481.2| PREDICTED: AT-rich interactive domain-containing protein 2-like
           [Vitis vinifera]
          Length = 601

 Score =  140 bits (354), Expect = 7e-31
 Identities = 75/171 (43%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
 Frame = -1

Query: 822 YVDDQFVRLPIPIGHHFQADVPEWSDVSLNGNLFSSKCLGTKVWPIEKRNVT---TLRAV 652
           + DD F++ PIP+G +FQA+VPEW+      +   SK LGT+VWP+E    +       V
Sbjct: 388 FPDDLFLK-PIPVGPNFQAEVPEWTGEVTESD---SKWLGTQVWPLENGECSFRIEKDCV 443

Query: 651 GKGRPSSCSCASPGSTTCVRHHILEKNHLLQSDLGPLYHIWNFDEMGEEYSKSWTVKEQG 472
           G+G+P SC C   GS  CVR HI EK   L+ DLG L++ W FD MGEE S +WT +E+ 
Sbjct: 444 GRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEK 503

Query: 471 RFDVLAKRQSS--RTNLLQNAMQCFPSKCRKEIFSYYFNVFIPRFMSVQTR 325
           RF  + +  SS    +   NA++ FP+K R+ + SYYFNVF+ R    Q R
Sbjct: 504 RFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 554


>emb|CBI34361.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  140 bits (354), Expect = 7e-31
 Identities = 75/171 (43%), Positives = 103/171 (60%), Gaps = 5/171 (2%)
 Frame = -1

Query: 822 YVDDQFVRLPIPIGHHFQADVPEWSDVSLNGNLFSSKCLGTKVWPIEKRNVT---TLRAV 652
           + DD F++ PIP+G +FQA+VPEW+      +   SK LGT+VWP+E    +       V
Sbjct: 319 FPDDLFLK-PIPVGPNFQAEVPEWTGEVTESD---SKWLGTQVWPLENGECSFRIEKDCV 374

Query: 651 GKGRPSSCSCASPGSTTCVRHHILEKNHLLQSDLGPLYHIWNFDEMGEEYSKSWTVKEQG 472
           G+G+P SC C   GS  CVR HI EK   L+ DLG L++ W FD MGEE S +WT +E+ 
Sbjct: 375 GRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEK 434

Query: 471 RFDVLAKRQSS--RTNLLQNAMQCFPSKCRKEIFSYYFNVFIPRFMSVQTR 325
           RF  + +  SS    +   NA++ FP+K R+ + SYYFNVF+ R    Q R
Sbjct: 435 RFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 485


>emb|CAN60589.1| hypothetical protein VITISV_023124 [Vitis vinifera]
          Length = 258

 Score =  136 bits (342), Expect = 2e-29
 Identities = 72/171 (42%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
 Frame = -1

Query: 822 YVDDQFVRLPIPIGHHFQADVPEWSDVSLNGNLFSSKCLGTKVWPIEKRNVT---TLRAV 652
           + DD F++ PIP+G +FQA+ P+W+      +   SK LGT+VWP+E    +        
Sbjct: 45  FPDDLFLK-PIPVGPNFQAEAPKWTGEVTESD---SKWLGTQVWPLENGECSFRIEKDCA 100

Query: 651 GKGRPSSCSCASPGSTTCVRHHILEKNHLLQSDLGPLYHIWNFDEMGEEYSKSWTVKEQG 472
           G+G+P SC C   GS  CVR HI EK   L+ DLG L++ W FD MGEE S +WT +E+ 
Sbjct: 101 GRGKPDSCDCRFSGSVECVRFHIAEKRMKLKLDLGSLFYHWRFDRMGEEISLAWTTEEEK 160

Query: 471 RFDVLAKRQSS--RTNLLQNAMQCFPSKCRKEIFSYYFNVFIPRFMSVQTR 325
           RF  + +  SS    +   NA++ FP+K R+ + SYYFNVF+ R    Q R
Sbjct: 161 RFKHMIRLNSSLQSPSFWDNALRIFPTKTREALVSYYFNVFLIRRRIYQNR 211


>ref|XP_002298024.1| predicted protein [Populus trichocarpa] gi|222845282|gb|EEE82829.1|
           predicted protein [Populus trichocarpa]
          Length = 648

 Score =  133 bits (334), Expect = 2e-28
 Identities = 73/168 (43%), Positives = 96/168 (57%), Gaps = 5/168 (2%)
 Frame = -1

Query: 813 DQFVRLPIPIGHHFQADVPEWSDVSLNGNLFSSKCLGTKVWPIEKRN---VTTLRAVGKG 643
           D  VR  + +G  FQA+VPEW+ V    +   SK LGT++WP+E  N   V  +  +G G
Sbjct: 437 DGHVRRHVAVGPLFQAEVPEWTSVVSESD---SKWLGTRLWPLECENHNAVFAMDPIGNG 493

Query: 642 RPSSCSCASPGSTTCVRHHILEKNHLLQSDLGPLYHIWNFDEMGEEYSKSWTVKEQGRFD 463
           RPS C C  PGS  CVR HI EK   L+ +LG L++ W FD MGEE S  WT +E+ RF 
Sbjct: 494 RPSVCGCQLPGSVGCVRFHIAEKRIKLKLELGYLFYHWQFDRMGEEVSLRWTTEEEKRFK 553

Query: 462 VLAKRQ--SSRTNLLQNAMQCFPSKCRKEIFSYYFNVFIPRFMSVQTR 325
            + K    S+      N  + FP K R+E+ SYYFN ++ R  S Q R
Sbjct: 554 DMVKFNLLSAGKCFWDNKHKYFPRKTREELVSYYFNAYLVRRRSYQNR 601


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