BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016888
         (894 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   370   e-100
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   367   2e-99
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   358   9e-97
gb|AFK33567.1| unknown [Lotus japonicus]                              353   3e-95
ref|XP_002299213.1| f-box family protein [Populus trichocarpa] g...   348   1e-93

>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  370 bits (950), Expect = e-100
 Identities = 189/277 (68%), Positives = 213/277 (76%), Gaps = 1/277 (0%)
 Frame = -3

Query: 847 METRKRLKRSL-KPHSDNSQINILDDGCLMHIFSFLSPIPDRYNTALVCHRWMFLACHPR 671
           ME +KR  R + K  +D S IN LDDGCLMHIFSFLSPIPDRYNTALVCHRW FLACHPR
Sbjct: 1   MEVQKRKWRRISKISTDISLINSLDDGCLMHIFSFLSPIPDRYNTALVCHRWRFLACHPR 60

Query: 670 LWLRVDRTVKALSQPGVFPTVKDAVSAARPGDTILIGAGGSHIASNIQIKKPLCLXXXXX 491
           LWLRVDR VK LSQPGV+P ++ AVSAARPGDTILI AGGSH  SNIQI+KPLCL     
Sbjct: 61  LWLRVDRAVKDLSQPGVYPNIEMAVSAARPGDTILIAAGGSHHVSNIQIEKPLCLIGAG- 119

Query: 490 XXXXXXXXXXXXXXXXXXXXXXXGDVPDDTTLTCSRGSESALEFLSSCKLANLTVKAELG 311
                                   + PDDTTL CSRGS+SALEF+S+CKLANLTV+ ELG
Sbjct: 120 ------------------------ESPDDTTLICSRGSDSALEFMSTCKLANLTVRTELG 155

Query: 310 CCLLHRSGKLTIDCCFLQCESNPLDHLSYAIISTSNCPEVAPSLLKCCGDGVSVSQTRIE 131
           CCLLHRSGKLT+D C LQCESNPLDHLSYAIIST+   EV PS LK C D VSV +T+I 
Sbjct: 156 CCLLHRSGKLTVDGCILQCESNPLDHLSYAIISTAGAAEVIPSALKTCSDAVSVLKTQIA 215

Query: 130 GGAKAVLTSGSLALQRVRVIYSQTSIFFWFDVEHQEQ 20
           GGAKAVLTSG+L+LQRVRVIY++TS+FFWF+VE  ++
Sbjct: 216 GGAKAVLTSGTLSLQRVRVIYTRTSLFFWFEVEGSDK 252


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  367 bits (943), Expect = 2e-99
 Identities = 188/279 (67%), Positives = 219/279 (78%), Gaps = 5/279 (1%)
 Frame = -3

Query: 847 METRKRLKR-----SLKPHSDNSQINILDDGCLMHIFSFLSPIPDRYNTALVCHRWMFLA 683
           ME +++ K      S  P+S++S I+ LDDGCLMHIFSFLSPIPDRYNTALVCHRW +LA
Sbjct: 1   MEEKRKWKHRKSSTSSIPNSNSSSIHNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHYLA 60

Query: 682 CHPRLWLRVDRTVKALSQPGVFPTVKDAVSAARPGDTILIGAGGSHIASNIQIKKPLCLX 503
           CHPRLWLRVDR+VK  S+PGVFP+++ AVSAARPGDTILI AGGSH+ASNIQIKKPLCL 
Sbjct: 61  CHPRLWLRVDRSVKDSSEPGVFPSIEMAVSAARPGDTILIAAGGSHLASNIQIKKPLCLI 120

Query: 502 XXXXXXXXXXXXXXXXXXXXXXXXXXXGDVPDDTTLTCSRGSESALEFLSSCKLANLTVK 323
                                       ++PDDTTL CSRGS+SALEFLS+CK+ANLTVK
Sbjct: 121 GGG-------------------------ELPDDTTLLCSRGSDSALEFLSTCKVANLTVK 155

Query: 322 AELGCCLLHRSGKLTIDCCFLQCESNPLDHLSYAIISTSNCPEVAPSLLKCCGDGVSVSQ 143
           AELGCCLLHRSG+LTID C LQCESNPLD+LS  I+ST+  PE+  S +K  GD VSVS+
Sbjct: 156 AELGCCLLHRSGRLTIDGCILQCESNPLDYLSCPIVSTAAGPEILTSSVKSHGDSVSVSR 215

Query: 142 TRIEGGAKAVLTSGSLALQRVRVIYSQTSIFFWFDVEHQ 26
           TRIEGGAKAV+TSGSLALQRVRVIY++TSIFFWFDV+ +
Sbjct: 216 TRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVDRR 254


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  358 bits (919), Expect = 9e-97
 Identities = 180/263 (68%), Positives = 204/263 (77%)
 Frame = -3

Query: 814 KPHSDNSQINILDDGCLMHIFSFLSPIPDRYNTALVCHRWMFLACHPRLWLRVDRTVKAL 635
           K   DN +IN LDDGCLMHIFSFLSPIPDRYNTALVCHRW FLACHPRLWLRVDR++K  
Sbjct: 13  KKEGDNCRINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWHFLACHPRLWLRVDRSIKDT 72

Query: 634 SQPGVFPTVKDAVSAARPGDTILIGAGGSHIASNIQIKKPLCLXXXXXXXXXXXXXXXXX 455
           SQPGVFP+++ AVSAARPGDTILI AGGSH+ASNIQI KPLCL                 
Sbjct: 73  SQPGVFPSIEMAVSAARPGDTILISAGGSHLASNIQINKPLCLIGGG------------- 119

Query: 454 XXXXXXXXXXXGDVPDDTTLTCSRGSESALEFLSSCKLANLTVKAELGCCLLHRSGKLTI 275
                       ++PD+T L CSRGS+SALEFLS+CKLANLTVKAELGCCLLHRSGKLTI
Sbjct: 120 ------------ELPDETMLLCSRGSDSALEFLSTCKLANLTVKAELGCCLLHRSGKLTI 167

Query: 274 DCCFLQCESNPLDHLSYAIISTSNCPEVAPSLLKCCGDGVSVSQTRIEGGAKAVLTSGSL 95
           D C LQCES+PLD+LS  I+ST+   EV  + +K  GD V+VSQTRIEGGAKAVLT+G L
Sbjct: 168 DSCVLQCESDPLDYLSCPIVSTAGKHEVLSAPMKTNGDSVTVSQTRIEGGAKAVLTNGDL 227

Query: 94  ALQRVRVIYSQTSIFFWFDVEHQ 26
            LQRVRVIYS+T ++FWFDV H+
Sbjct: 228 VLQRVRVIYSRTYVYFWFDVGHK 250


>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score =  353 bits (906), Expect = 3e-95
 Identities = 181/260 (69%), Positives = 200/260 (76%), Gaps = 2/260 (0%)
 Frame = -3

Query: 805 SDNSQINILDDGCLMHIFSFLSPIPDRYNTALVCHRWMFLACHPRLWLRVDRTVKALSQP 626
           S +S IN LDDGCLMHIFSFL PIPDR+NTALVCHRW +LACHPRLWLRVDR+VK LSQP
Sbjct: 32  SSSSHINNLDDGCLMHIFSFLPPIPDRFNTALVCHRWNYLACHPRLWLRVDRSVKDLSQP 91

Query: 625 GVFPTVKDAVSAARPGDTILIGAGGSHIASNIQIKKPLCLXXXXXXXXXXXXXXXXXXXX 446
           GVFP ++ AVSA+RPGDTILI AGGSH  SNIQIKKPLCL                    
Sbjct: 92  GVFPNIETAVSASRPGDTILIAAGGSHHTSNIQIKKPLCLIGAG---------------- 135

Query: 445 XXXXXXXXGDVPDDTTLTCSRGSESALEFLSSCKLANLTVKAELGCCLLHRSGKLTIDCC 266
                    ++PDDTTL CSRGS+SALE LS+CKLANLTVKAELGCCLLHR G+LT+D C
Sbjct: 136 ---------ELPDDTTLICSRGSDSALELLSTCKLANLTVKAELGCCLLHRKGRLTVDGC 186

Query: 265 FLQCESNPLDHLSYAIISTSNCPEVAPSLLKC--CGDGVSVSQTRIEGGAKAVLTSGSLA 92
            LQCESNPLD LS  I+ST+N  EV PS  K    GDGV VSQTRIEGGAKAV+TSG LA
Sbjct: 187 ILQCESNPLDFLSCPIVSTANSSEVLPSQTKSNGGGDGVFVSQTRIEGGAKAVVTSGDLA 246

Query: 91  LQRVRVIYSQTSIFFWFDVE 32
           LQRVRVIY++TS+ FWFDVE
Sbjct: 247 LQRVRVIYARTSLLFWFDVE 266


>ref|XP_002299213.1| f-box family protein [Populus trichocarpa]
           gi|222846471|gb|EEE84018.1| f-box family protein
           [Populus trichocarpa]
          Length = 251

 Score =  348 bits (893), Expect = 1e-93
 Identities = 176/274 (64%), Positives = 210/274 (76%), Gaps = 1/274 (0%)
 Frame = -3

Query: 844 ETRKRLKRSLKPHSDN-SQINILDDGCLMHIFSFLSPIPDRYNTALVCHRWMFLACHPRL 668
           E  K+ K++ KP S +   IN LDDGCLMHIFSFLSPIPDRYNTALVCHRW +LACHPRL
Sbjct: 3   EQGKQKKKNKKPLSSSFCPINNLDDGCLMHIFSFLSPIPDRYNTALVCHRWCYLACHPRL 62

Query: 667 WLRVDRTVKALSQPGVFPTVKDAVSAARPGDTILIGAGGSHIASNIQIKKPLCLXXXXXX 488
           WLRV+++ K LS+PGVFP+++ AVSAARPGDTILI AGG H+ASNIQI KPLCL      
Sbjct: 63  WLRVEQSAKDLSEPGVFPSIEKAVSAARPGDTILIAAGGRHLASNIQINKPLCLIGGG-- 120

Query: 487 XXXXXXXXXXXXXXXXXXXXXXGDVPDDTTLTCSRGSESALEFLSSCKLANLTVKAELGC 308
                                  ++PD+TTL CSRGS+SALEF+++CKLANLTVKAELGC
Sbjct: 121 -----------------------ELPDETTLLCSRGSDSALEFITTCKLANLTVKAELGC 157

Query: 307 CLLHRSGKLTIDCCFLQCESNPLDHLSYAIISTSNCPEVAPSLLKCCGDGVSVSQTRIEG 128
           CLLHRSG+LTID C LQCE++PLD+LS  IIST+   EV  S +K  G+ +SVSQTRIEG
Sbjct: 158 CLLHRSGRLTIDSCILQCEASPLDYLSCPIISTAGGNEVVSSAVKTKGNRISVSQTRIEG 217

Query: 127 GAKAVLTSGSLALQRVRVIYSQTSIFFWFDVEHQ 26
           GAKAVLTSG L LQ+VRVIY++T ++FWFDV+ Q
Sbjct: 218 GAKAVLTSGDLTLQQVRVIYARTFVYFWFDVDSQ 251