BLASTX nr result

ID: Bupleurum21_contig00016874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016874
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA74965.1| Importin alpha-like protein [Arabidopsis thaliana]     65   6e-09
ref|XP_002868159.1| AT3g06720/F3E22_14 [Arabidopsis lyrata subsp...    65   8e-09
ref|NP_001154239.1| importin alpha isoform 2 [Arabidopsis thalia...    65   8e-09
gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arabidopsis thalian...    65   8e-09
ref|XP_002318966.1| predicted protein [Populus trichocarpa] gi|2...    63   2e-08

>emb|CAA74965.1| Importin alpha-like protein [Arabidopsis thaliana]
          Length = 535

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 52/166 (31%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = -1

Query: 519 PKLQSLAASILQSVFAHSS-NGNMVIENITSEIVLNLISSNHSDVHVQALELLHSIALTN 343
           P+LQ  AA  L ++ + +S N  +VIE+    I + L++S   DV  QA+  L ++A  +
Sbjct: 135 PQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDS 194

Query: 342 PGPKFNAIFEDALEPLSLLLSNEFTKKEALYSGSKALAAVCQVYPELPPDKLQTVLHGLT 163
           P  +   + + AL PL   L NE  K   L + +  L+  C+  P+ P D+++  L  L 
Sbjct: 195 PRCRDLVLGQGALIPLLSQL-NEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALE 253

Query: 162 KLLEHDSLEILSHACSGFGYLCDGRHEMVVENESFKSVVDPLVQLI 25
           +L+     E+L+ AC    YL DG ++  V++     VV  LV+L+
Sbjct: 254 RLIHSTDEEVLTDACWALSYLSDGTNDK-VQSVIEAGVVPRLVELL 298


>ref|XP_002868159.1| AT3g06720/F3E22_14 [Arabidopsis lyrata subsp. lyrata]
           gi|297313995|gb|EFH44418.1| AT3g06720/F3E22_14
           [Arabidopsis lyrata subsp. lyrata]
          Length = 583

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = -1

Query: 519 PKLQSLAASILQSVFAHSS-NGNMVIENITSEIVLNLISSNHSDVHVQALELLHSIALTN 343
           P+LQ  AA  L ++ + +S N  +VIE+    I + L++S   DV  QA+  L ++A  +
Sbjct: 135 PQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDS 194

Query: 342 PGPKFNAIFEDALEPLSLLLSNEFTKKEALYSGSKALAAVCQVYPELPPDKLQTVLHGLT 163
           P  +   + + AL PL   L NE  K   L + +  L+  C+  P+ P D+++  L  L 
Sbjct: 195 PRCRDLVLGQGALIPLLSQL-NEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALE 253

Query: 162 KLLEHDSLEILSHACSGFGYLCDGRHEMVVENESFKSVVDPLVQLI 25
           +L+     E+L+ AC    YL DG ++  +++     VV  LV+L+
Sbjct: 254 RLIHSTDEEVLTDACWALSYLSDGTNDK-IQSVIEAGVVPRLVELL 298


>ref|NP_001154239.1| importin alpha isoform 2 [Arabidopsis thaliana]
           gi|240255908|ref|NP_567485.4| importin alpha isoform 2
           [Arabidopsis thaliana] gi|332658299|gb|AEE83699.1|
           importin alpha isoform 2 [Arabidopsis thaliana]
           gi|332658300|gb|AEE83700.1| importin alpha isoform 2
           [Arabidopsis thaliana]
          Length = 535

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = -1

Query: 519 PKLQSLAASILQSVFAHSS-NGNMVIENITSEIVLNLISSNHSDVHVQALELLHSIALTN 343
           P+LQ  AA  L ++ + +S N  +VIE+    I + L++S   DV  QA+  L ++A  +
Sbjct: 135 PQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDS 194

Query: 342 PGPKFNAIFEDALEPLSLLLSNEFTKKEALYSGSKALAAVCQVYPELPPDKLQTVLHGLT 163
           P  +   + + AL PL   L NE  K   L + +  L+  C+  P+ P D+++  L  L 
Sbjct: 195 PRCRDLVLGQGALIPLLSQL-NEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALE 253

Query: 162 KLLEHDSLEILSHACSGFGYLCDGRHEMVVENESFKSVVDPLVQLI 25
           +L+     E+L+ AC    YL DG ++  +++     VV  LV+L+
Sbjct: 254 RLIHSTDEEVLTDACWALSYLSDGTNDK-IQSVIEAGVVPRLVELL 298


>gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arabidopsis thaliana]
           gi|16974501|gb|AAL31160.1| AT3g06720/F3E22_14
           [Arabidopsis thaliana]
          Length = 535

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 51/166 (30%), Positives = 87/166 (52%), Gaps = 1/166 (0%)
 Frame = -1

Query: 519 PKLQSLAASILQSVFAHSS-NGNMVIENITSEIVLNLISSNHSDVHVQALELLHSIALTN 343
           P+LQ  AA  L ++ + +S N  +VIE+    I + L++S   DV  QA+  L ++A  +
Sbjct: 135 PQLQFEAAWALTNIASGTSENTKVVIEHGAVPIFVQLLASQSDDVREQAVWALGNVAGDS 194

Query: 342 PGPKFNAIFEDALEPLSLLLSNEFTKKEALYSGSKALAAVCQVYPELPPDKLQTVLHGLT 163
           P  +   + + AL PL   L NE  K   L + +  L+  C+  P+ P D+++  L  L 
Sbjct: 195 PRCRDLVLGQGALIPLLSQL-NEHAKLSMLRNATWTLSNFCRGKPQPPFDQVRPALPALE 253

Query: 162 KLLEHDSLEILSHACSGFGYLCDGRHEMVVENESFKSVVDPLVQLI 25
           +L+     E+L+ AC    YL DG ++  +++     VV  LV+L+
Sbjct: 254 RLIHSTDEEVLTDACWALSYLSDGTNDK-IQSVIEAGVVPRLVELL 298


>ref|XP_002318966.1| predicted protein [Populus trichocarpa] gi|222857342|gb|EEE94889.1|
           predicted protein [Populus trichocarpa]
          Length = 529

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
 Frame = -1

Query: 519 PKLQSLAASILQSVFAHSS-NGNMVIENITSEIVLNLISSNHSDVHVQALELLHSIALTN 343
           P+LQ  AA  L ++ + +S N  +VI++    I + L++S   DV  QA+  L ++A  +
Sbjct: 130 PQLQFEAAWALTNIASGTSENTKVVIDHGAVPIFVQLLASPSDDVREQAVWALGNVAGDS 189

Query: 342 PGPKFNAIFEDALEPLSLLLSNEFTKKEALYSGSKALAAVCQVYPELPPDKLQTVLHGLT 163
           P  +   +   AL PL   L NE  K   L + +  L+  C+  P+ P D+++  L  L 
Sbjct: 190 PRCRDLVLGNGALLPLLAQL-NENAKLSMLRNATWTLSNFCRGKPQPPFDQVKPALPALA 248

Query: 162 KLLEHDSLEILSHACSGFGYLCDGRHEMV 76
           +L+  D  E+L+ AC    YL DG ++ +
Sbjct: 249 RLIHSDDEEVLTDACWALSYLSDGTNDKI 277


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