BLASTX nr result

ID: Bupleurum21_contig00016857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016857
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526489.1| eukaryotic translation initiation factor 4g,...   107   8e-22
ref|XP_003626750.1| Eukaryotic translation initiation factor 4G ...   104   8e-21
ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation...   103   2e-20
ref|XP_003516876.1| PREDICTED: eukaryotic translation initiation...   103   2e-20
emb|CAN77792.1| hypothetical protein VITISV_043311 [Vitis vinifera]   103   2e-20

>ref|XP_002526489.1| eukaryotic translation initiation factor 4g, putative [Ricinus
            communis] gi|223534164|gb|EEF35880.1| eukaryotic
            translation initiation factor 4g, putative [Ricinus
            communis]
          Length = 1753

 Score =  107 bits (268), Expect = 8e-22
 Identities = 58/111 (52%), Positives = 82/111 (73%), Gaps = 10/111 (9%)
 Frame = +2

Query: 5    KKKRKEALQKADRAGTTADLFGAYKGPDEKKENHINVESSETISSNS---------KELS 157
            ++KRKE LQKAD AGTT DL+ AYKGP+EKKE+ +  E++E+ S++S         +++ 
Sbjct: 809  RRKRKEILQKADAAGTTLDLYMAYKGPEEKKESAVPTEATESTSTSSILKQEPADARQVD 868

Query: 158  AGTSQKDVPNEGKAEPDDWEDAADLSTSKLESSDDREQ-LGETKQHIENGN 307
            + +S+KDV N  KAEP+DWEDAAD+ST KLE+SD+ EQ LG   QH ++G+
Sbjct: 869  SNSSEKDVQN--KAEPEDWEDAADISTPKLETSDNGEQGLGGIVQHGKDGS 917


>ref|XP_003626750.1| Eukaryotic translation initiation factor 4G [Medicago truncatula]
            gi|355520772|gb|AET01226.1| Eukaryotic translation
            initiation factor 4G [Medicago truncatula]
          Length = 1749

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/97 (58%), Positives = 68/97 (70%), Gaps = 7/97 (7%)
 Frame = +2

Query: 2    GKKKRKEALQKADRAGTTADLFGAYKGPDEKKENHINVESSET--ISSNSKELSAGTSQK 175
            GKKKRKE LQKAD AGTT+DL+ AYKGP+EKKE  +  ESSE+   S   K+LSA ++Q 
Sbjct: 818  GKKKRKEFLQKADAAGTTSDLYNAYKGPEEKKETGLISESSESECTSEGLKQLSADSAQL 877

Query: 176  DV-----PNEGKAEPDDWEDAADLSTSKLESSDDREQ 271
            D        + KAEPDDWEDAAD+ST KLE  D  +Q
Sbjct: 878  DAAVSEKSGQNKAEPDDWEDAADVSTPKLEVDDKSQQ 914


>ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation factor 4G-like [Vitis
            vinifera]
          Length = 1935

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
 Frame = +2

Query: 5    KKKRKEALQKADRAGTTADLFGAYKGPDEKKENHINVESSETISSNSKELSAGTSQKDV- 181
            KKKRKE LQKAD AGTT+DL+ AYKGP+EKKE  I+ ES  T + N K++SA   Q+DV 
Sbjct: 983  KKKRKEILQKADAAGTTSDLYMAYKGPEEKKETIISSES--TSAGNVKQVSADAGQEDVV 1040

Query: 182  ----PNEGKAEPDDWEDAADLSTSKLESSDDREQLGETKQHIENGN 307
                  + KAEPDDWEDAAD+ST KLE+ D+    G +    ++GN
Sbjct: 1041 GSDIGEQPKAEPDDWEDAADISTPKLETQDNGVANGGSMLDDKDGN 1086


>ref|XP_003516876.1| PREDICTED: eukaryotic translation initiation factor 4G-like [Glycine
            max]
          Length = 1709

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/100 (58%), Positives = 71/100 (71%), Gaps = 7/100 (7%)
 Frame = +2

Query: 2    GKKKRKEALQKADRAGTTADLFGAYKGPDEKKENHINVESSE--TISSNSKELSAGTSQK 175
            GKKKRKE LQKAD AG+T+DL+ AYKGP+EKKE  I+ E +E  + S N + L   T+Q 
Sbjct: 789  GKKKRKEILQKADAAGSTSDLYNAYKGPEEKKETIISSEKTESGSTSGNLERLPTDTAQP 848

Query: 176  D-VPNE----GKAEPDDWEDAADLSTSKLESSDDREQLGE 280
            D V NE     KAE DDWEDAAD+ST KLE SD+ EQ+ +
Sbjct: 849  DAVANEQSKQSKAELDDWEDAADMSTPKLEVSDETEQVSD 888


>emb|CAN77792.1| hypothetical protein VITISV_043311 [Vitis vinifera]
          Length = 1778

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/106 (54%), Positives = 73/106 (68%), Gaps = 5/106 (4%)
 Frame = +2

Query: 5    KKKRKEALQKADRAGTTADLFGAYKGPDEKKENHINVESSETISSNSKELSAGTSQKDV- 181
            KKKRKE LQKAD AGTT+DL+ AYKGP+EKKE  I+ ES  T + N K++SA   Q+DV 
Sbjct: 983  KKKRKEILQKADAAGTTSDLYMAYKGPEEKKETIISSES--TSAGNVKQVSADAGQEDVV 1040

Query: 182  ----PNEGKAEPDDWEDAADLSTSKLESSDDREQLGETKQHIENGN 307
                  + KAEPDDWEDAAD+ST KLE+ D+    G +    ++GN
Sbjct: 1041 GSDIGEQPKAEPDDWEDAADISTPKLETQDNGVANGGSMLDDKDGN 1086


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