BLASTX nr result

ID: Bupleurum21_contig00016845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016845
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            96   4e-18
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    96   4e-18
ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232...    94   9e-18
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub...    91   1e-16

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/90 (48%), Positives = 56/90 (62%)
 Frame = -2

Query: 273 LRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSWID 94
           L FAGR QLI SV+  + ++W     LPK  +KK++ + S+FLW GS   R   KVSW+D
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717

Query: 93  CCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4
           CCLP +EGGLG R   EWN    L  +W L
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
           thaliana]
          Length = 1072

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/90 (48%), Positives = 56/90 (62%)
 Frame = -2

Query: 273 LRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSWID 94
           L FAGR QLI SV+  + ++W     LPK  +KK++ + S+FLW GS   R   KVSW+D
Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717

Query: 93  CCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4
           CCLP +EGGLG R   EWN    L  +W L
Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747


>ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis
           sativus]
          Length = 382

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 46/92 (50%), Positives = 58/92 (63%)
 Frame = -2

Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100
           R L FAGRLQL++SVL ++Q YWA    LP  + + V  IL  +LW G  + R   KV+W
Sbjct: 70  RVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAW 129

Query: 99  IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4
            + CLP +EGGL IRD   WN A+TL  LW L
Sbjct: 130 DEVCLPFDEGGLAIRDGSSWNIASTLKILWLL 161


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 44/92 (47%), Positives = 55/92 (59%)
 Frame = -2

Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100
           R L +AGR+QLI SVL ++Q YWA    LP  ++K V+ I+  FLW GS       KV+W
Sbjct: 90  RTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAW 149

Query: 99  IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4
              CLP  EGGLGI+   EWN  A L  +W L
Sbjct: 150 DQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL 181


>gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata]
          Length = 441

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/92 (46%), Positives = 55/92 (59%)
 Frame = -2

Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100
           R L FAGRLQLI SV+ ++ ++W     LP   +K++ G+ S FLW G   NR   KVSW
Sbjct: 23  RHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAFLWSGPELNRKKAKVSW 82

Query: 99  IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4
            D C+P  EGGLG+R   E N    L  +WRL
Sbjct: 83  NDVCMPKEEGGLGLRSLTEANKVCCLKLIWRL 114


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