BLASTX nr result
ID: Bupleurum21_contig00016845
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00016845 (280 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 96 4e-18 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 96 4e-18 ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232... 94 9e-18 ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2... 91 1e-16 gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata sub... 91 1e-16 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/90 (48%), Positives = 56/90 (62%) Frame = -2 Query: 273 LRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSWID 94 L FAGR QLI SV+ + ++W LPK +KK++ + S+FLW GS R KVSW+D Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717 Query: 93 CCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4 CCLP +EGGLG R EWN L +W L Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 95.5 bits (236), Expect = 4e-18 Identities = 44/90 (48%), Positives = 56/90 (62%) Frame = -2 Query: 273 LRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSWID 94 L FAGR QLI SV+ + ++W LPK +KK++ + S+FLW GS R KVSW+D Sbjct: 658 LSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVD 717 Query: 93 CCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4 CCLP +EGGLG R EWN L +W L Sbjct: 718 CCLPKSEGGLGFRSFGEWNKTLLLRLIWVL 747 >ref|XP_004173733.1| PREDICTED: uncharacterized protein LOC101232446, partial [Cucumis sativus] Length = 382 Score = 94.4 bits (233), Expect = 9e-18 Identities = 46/92 (50%), Positives = 58/92 (63%) Frame = -2 Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100 R L FAGRLQL++SVL ++Q YWA LP + + V IL +LW G + R KV+W Sbjct: 70 RVLSFAGRLQLVRSVLRSLQVYWASVFMLPMKVHRDVDKILRSYLWRGKEEGRGGAKVAW 129 Query: 99 IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4 + CLP +EGGL IRD WN A+TL LW L Sbjct: 130 DEVCLPFDEGGLAIRDGSSWNIASTLKILWLL 161 >ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1| predicted protein [Populus trichocarpa] Length = 517 Score = 90.9 bits (224), Expect = 1e-16 Identities = 44/92 (47%), Positives = 55/92 (59%) Frame = -2 Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100 R L +AGR+QLI SVL ++Q YWA LP ++K V+ I+ FLW GS KV+W Sbjct: 90 RTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRTTGAKVAW 149 Query: 99 IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4 CLP EGGLGI+ EWN A L +W L Sbjct: 150 DQVCLPKKEGGLGIKSIKEWNKIALLKHIWNL 181 >gb|ABW81051.1| tn7 reverse transcriptase [Arabidopsis lyrata subsp. lyrata] Length = 441 Score = 90.5 bits (223), Expect = 1e-16 Identities = 43/92 (46%), Positives = 55/92 (59%) Frame = -2 Query: 279 RFLRFAGRLQLIKSVLSAMQSYWAVHLFLPKCILKKVQGILSQFLWGGSSQNRAIHKVSW 100 R L FAGRLQLI SV+ ++ ++W LP +K++ G+ S FLW G NR KVSW Sbjct: 23 RHLSFAGRLQLISSVIHSLTNFWMSAFRLPNACIKEIDGLCSAFLWSGPELNRKKAKVSW 82 Query: 99 IDCCLPMNEGGLGIRDPIEWNTAATLFQLWRL 4 D C+P EGGLG+R E N L +WRL Sbjct: 83 NDVCMPKEEGGLGLRSLTEANKVCCLKLIWRL 114