BLASTX nr result

ID: Bupleurum21_contig00016829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016829
         (1194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531215.1| GATA transcription factor, putative [Ricinus...   421   e-115
gb|ABK95062.1| unknown [Populus trichocarpa]                          418   e-114
ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_003517400.1| PREDICTED: GATA transcription factor 26-like...   403   e-110

>ref|XP_002531215.1| GATA transcription factor, putative [Ricinus communis]
            gi|223529175|gb|EEF31151.1| GATA transcription factor,
            putative [Ricinus communis]
          Length = 542

 Score =  421 bits (1081), Expect = e-115
 Identities = 235/404 (58%), Positives = 279/404 (69%), Gaps = 9/404 (2%)
 Frame = -1

Query: 1185 MVKQGPCCHCGVTSTPLWRNGPAEKPVLCNACGSRWRTKGTLTNYTPLHSRAQTDELE-Y 1009
            M KQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKGTL NYTPLH+RA  D+ E +
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARADPDDYEDH 60

Query: 1008 RVQRMRAMS-TKHKDGKVLKRKQNYDAELGSSFVPDHDSQKGVWHCLDYNQGYVKNFDED 832
            RV R++++S  K+KD K+LKRK N+D  +            GV H  DYNQGY K  DED
Sbjct: 61   RVSRVKSISINKNKDVKLLKRKANHDNGVVG----------GVVH--DYNQGYRKVLDED 108

Query: 831  XXXXXXXXXXXXXXXSCVHLGSADASDLTGAAQSIVWDTMVPSRKRTCVNRPKPSSVEKL 652
                           SC   GSADASDLTG AQS+VWD+MVPS+KRTCVNRPK S VEKL
Sbjct: 109  ISNRSSSGSAISNSESCAQFGSADASDLTGPAQSVVWDSMVPSKKRTCVNRPKQSPVEKL 168

Query: 651  TKDLYTILHEQQSY-FSGSTEEDLLFECDTPVVSVEIGHGSVLIRHXXXXXXXXXXXXXX 475
            TKDLYTILHEQQS  FSGS+EEDLLFE +TP+VSVEIGHGSVLIRH              
Sbjct: 169  TKDLYTILHEQQSSCFSGSSEEDLLFESETPMVSVEIGHGSVLIRHPSSIARDEESEASS 228

Query: 474  S-VYNKPPLANEACSDS-NLCSHTLNKFNLSSTQF---NGKKDLGQKKEQELHER-KDQQ 313
              V NK    NEA S S  L  H  NK N+ +        K  +GQ  + E  +R K Q 
Sbjct: 229  LSVENKQCSTNEAYSHSLGLLVHIGNK-NIHTPSLLIEKAKNPIGQGLQHEQLKRDKFQH 287

Query: 312  EELQILGNHNSSICSIELKDVLNYEEFARHITNYDLQDLLKLLPSIDTIGLPDSLQIMFD 133
            E +Q+LGNHNS +C+++L D+LN+EEFAR++TN + Q LLK LP +DT  LPDS++ MFD
Sbjct: 288  ERVQVLGNHNSPLCNVDLNDILNFEEFARYLTNEEQQQLLKYLPPVDTAQLPDSIKSMFD 347

Query: 132  SPQFKENISTFQKLLADGVFDLSSSDVNSECNRTLKKLLLQNLT 1
            SPQFKENIS +Q+LLA+GVFD+S S+  +E   TLK+L L NL+
Sbjct: 348  SPQFKENISCYQQLLAEGVFDISFSEAKAEDCNTLKRLTLSNLS 391


>gb|ABK95062.1| unknown [Populus trichocarpa]
          Length = 540

 Score =  418 bits (1074), Expect = e-114
 Identities = 232/401 (57%), Positives = 281/401 (70%), Gaps = 8/401 (1%)
 Frame = -1

Query: 1185 MVKQGPCCHCGVTSTPLWRNGPAEKPVLCNACGSRWRTKGTLTNYTPLHSRAQTDELE-Y 1009
            M KQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKGTL NYTPLH+RA+ D+ E +
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDDYEDH 60

Query: 1008 RVQRMRAMS-TKHKDGKVLKRKQNYDAELGSSFVPDHDSQKGVWHCLDYNQGYVKNFDED 832
            RV R++++S +K+K+ K+LKRK NYD  +                 LDYNQGY K  DED
Sbjct: 61   RVSRLKSVSISKNKEVKLLKRKPNYDNRVA----------------LDYNQGYRKVVDED 104

Query: 831  XXXXXXXXXXXXXXXSCVHLGSADASDLTGAAQSIVWDTMVPSRKRTCVNRPKPSSVEKL 652
                           SC   GSA+ASDLTG AQS+VWD++VPSRKRTCVNRPKPSSVEKL
Sbjct: 105  TSNRSSSGSAISNPESCAQFGSAEASDLTGPAQSVVWDSLVPSRKRTCVNRPKPSSVEKL 164

Query: 651  TKDLYTILHEQQSY-FSGSTEEDLLFECDTPVVSVEIGHGSVLIRHXXXXXXXXXXXXXX 475
            TKDLYTILHEQQS  FSGS+EEDLLF+ +TP+VSVEIGHGSVLIRH              
Sbjct: 165  TKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESEASS 224

Query: 474  S-VYNKPPLANEACSDSNLCS-HTLNK-FNLSSTQFNGKKDL-GQKKEQELHER-KDQQE 310
              V NK  L NEA S   +   H  NK  N +       K+L GQ  +QE  +R K   E
Sbjct: 225  LSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPITETTKNLTGQGMQQEQLKRDKFPHE 284

Query: 309  ELQILGNHNSSICSIELKDVLNYEEFARHITNYDLQDLLKLLPSIDTIGLPDSLQIMFDS 130
            ++ ILG+HNS +CSI+L D+LN+EEFARH+TN + Q LLK LP +DT  LP+S++ MFDS
Sbjct: 285  KVHILGSHNSPLCSIDLNDILNFEEFARHLTNEEQQQLLKYLPPLDTTKLPNSIESMFDS 344

Query: 129  PQFKENISTFQKLLADGVFDLSSSDVNSECNRTLKKLLLQN 7
            PQFKENI+++Q+LL++GVFDLS S+  +E  +TLK+L L N
Sbjct: 345  PQFKENINSYQQLLSEGVFDLSFSEAKTEDCKTLKRLTLSN 385


>ref|XP_002326479.1| predicted protein [Populus trichocarpa] gi|222833801|gb|EEE72278.1|
            predicted protein [Populus trichocarpa]
          Length = 544

 Score =  411 bits (1057), Expect = e-112
 Identities = 230/403 (57%), Positives = 281/403 (69%), Gaps = 8/403 (1%)
 Frame = -1

Query: 1185 MVKQGPCCHCGVTSTPLWRNGPAEKPVLCNACGSRWRTKGTLTNYTPLHSRAQTDELE-Y 1009
            M KQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKGTL NYTPLH+RA  D+ E +
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAGPDDYEDH 60

Query: 1008 RVQRMRAMS-TKHKDGKVLKRKQNYDAELGSSFVPDHDSQKGVWHCLDYNQGYVKNFDED 832
            RV R++++S  K+++ K+LKRK NYD          H   +GV   LDYN+GY K  DED
Sbjct: 61   RVSRLKSISMNKNREVKLLKRKPNYD----------HRVAEGV--ALDYNEGYRKVVDED 108

Query: 831  XXXXXXXXXXXXXXXSCVHLGSADASDLTGAAQSIVWDTMVPSRKRTCVNRPKPSSVEKL 652
                           SC   GSADASDLTG AQS+VWD++VPSRKRTCVNRPKPS VEKL
Sbjct: 109  TSNRSSSGSAISNSESCAQFGSADASDLTGPAQSVVWDSLVPSRKRTCVNRPKPSPVEKL 168

Query: 651  TKDLYTILHEQQSY-FSGSTEEDLLFECDTPVVSVEIGHGSVLIRHXXXXXXXXXXXXXX 475
            TKDLYTILHEQQS  FSGS+EEDLLF+ +TP+VSVEIGHGSVLIRH              
Sbjct: 169  TKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESEASS 228

Query: 474  S-VYNKPPLANEACSDSNLCS-HTLNK-FNLSSTQFNGKKDL-GQKKEQE-LHERKDQQE 310
              V NK    NEA S   +   H  N+  N++       K+L GQ  +QE L+  K   E
Sbjct: 229  LSVENKQYSTNEAYSHPVILPVHNENQSVNMTYPVTVKTKNLSGQGMQQEQLNRDKSPHE 288

Query: 309  ELQILGNHNSSICSIELKDVLNYEEFARHITNYDLQDLLKLLPSIDTIGLPDSLQIMFDS 130
            ++ ILG+HNS +CS++L D+LN+EEFARH+TN + Q LLK LP +DT  LP+S++ MFDS
Sbjct: 289  KVHILGSHNSPLCSVDLNDILNFEEFARHLTNEEQQQLLKYLPPLDTAKLPNSIKSMFDS 348

Query: 129  PQFKENISTFQKLLADGVFDLSSSDVNSECNRTLKKLLLQNLT 1
            PQFKENI+ +Q+LL++GVFDLS    + +C +TLK+L L NL+
Sbjct: 349  PQFKENINCYQQLLSEGVFDLSLEAKSEDC-KTLKRLTLSNLS 390


>ref|XP_002329605.1| predicted protein [Populus trichocarpa] gi|222870314|gb|EEF07445.1|
            predicted protein [Populus trichocarpa]
          Length = 536

 Score =  404 bits (1038), Expect = e-110
 Identities = 228/401 (56%), Positives = 277/401 (69%), Gaps = 8/401 (1%)
 Frame = -1

Query: 1185 MVKQGPCCHCGVTSTPLWRNGPAEKPVLCNACGSRWRTKGTLTNYTPLHSRAQTDELE-Y 1009
            M KQGPCCHCGVTSTPLWRNGP EKPVLCNACGSRWRTKGTL NYTPLH+RA+ D+ E +
Sbjct: 1    MGKQGPCCHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAEPDDYEDH 60

Query: 1008 RVQRMRAMS-TKHKDGKVLKRKQNYDAELGSSFVPDHDSQKGVWHCLDYNQGYVKNFDED 832
            RV R++++S +K+K+ K+LKRK NYD  +                 LDYNQGY K  DED
Sbjct: 61   RVSRLKSVSISKNKEVKLLKRKPNYDNRVA----------------LDYNQGYRKVVDED 104

Query: 831  XXXXXXXXXXXXXXXSCVHLGSADASDLTGAAQSIVWDTMVPSRKRTCVNRPKPSSVEKL 652
                           SC   GSA+AS     AQS+VWD++VPSRKRTCVNRPKPSSVEKL
Sbjct: 105  TSNRSSSGSAISNPESCAQFGSAEASP----AQSVVWDSLVPSRKRTCVNRPKPSSVEKL 160

Query: 651  TKDLYTILHEQQSY-FSGSTEEDLLFECDTPVVSVEIGHGSVLIRHXXXXXXXXXXXXXX 475
            TKDLYTILHEQQS  FSGS+EEDLLF+ +TP+VSVEIGHGSVLIRH              
Sbjct: 161  TKDLYTILHEQQSSCFSGSSEEDLLFDNETPMVSVEIGHGSVLIRHPSSIARDEESEASS 220

Query: 474  S-VYNKPPLANEACSDSNLCS-HTLNK-FNLSSTQFNGKKDL-GQKKEQELHER-KDQQE 310
              V NK  L NEA S   +   H  NK  N +       K+L GQ  +QE  +R K   E
Sbjct: 221  LSVENKQYLTNEAYSHPVILPVHNENKSVNTTYPITETTKNLTGQGMQQEQLKRDKFPHE 280

Query: 309  ELQILGNHNSSICSIELKDVLNYEEFARHITNYDLQDLLKLLPSIDTIGLPDSLQIMFDS 130
            ++ ILG+HNS +CSI+L D+LN+EEFARH+TN + Q LLK LP +DT  LP+S++ MFDS
Sbjct: 281  KVHILGSHNSPLCSIDLNDILNFEEFARHLTNEEQQQLLKYLPPLDTTKLPNSIESMFDS 340

Query: 129  PQFKENISTFQKLLADGVFDLSSSDVNSECNRTLKKLLLQN 7
            PQFKENI+++Q+LL++GVFDLS S+  +E  +TLK+L L N
Sbjct: 341  PQFKENINSYQQLLSEGVFDLSFSEAKTEDCKTLKRLTLSN 381


>ref|XP_003517400.1| PREDICTED: GATA transcription factor 26-like [Glycine max]
          Length = 551

 Score =  403 bits (1036), Expect = e-110
 Identities = 228/404 (56%), Positives = 267/404 (66%), Gaps = 9/404 (2%)
 Frame = -1

Query: 1185 MVKQGPCCHCGVTSTPLWRNGPAEKPVLCNACGSRWRTKGTLTNYTPLHSRAQTDELE-Y 1009
            M KQGPC HCGVTSTPLWRNGP EKPVLCNACGSRWRTKGTL  YTPLH+RA+TD+ +  
Sbjct: 1    MGKQGPCYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGTLAKYTPLHARAETDDYDDQ 60

Query: 1008 RVQRMRAMS-TKHKDGKVLKRKQNYDAELGSSFVPDHDSQKGVWHCLDYNQGYVKNFDED 832
            RV R++++S  K K+  +LKRKQN+D  +   F PD            YNQGY K  DED
Sbjct: 61   RVSRVKSISINKKKEVALLKRKQNHDNVVSGGFAPD------------YNQGYQKVVDED 108

Query: 831  XXXXXXXXXXXXXXXSCVHLG--SADASDLTGAAQSIVWDTMVPSRKRTCVNRPKPSSVE 658
                           SC   G    DASDLTG AQS+VWD MVPSRKRTCV RPKPSSVE
Sbjct: 109  ISNRSSSGSAISNSESCAQFGYGGMDASDLTGPAQSVVWDAMVPSRKRTCVGRPKPSSVE 168

Query: 657  KLTKDLYTILHEQQSYFSGSTEEDLLFECDTPVVSVEIGHGSVLIRH-XXXXXXXXXXXX 481
            KLTKDL TILHEQQSYFS S+EEDLLFE DTP+VSVEIGHGS+LIRH             
Sbjct: 169  KLTKDLCTILHEQQSYFSVSSEEDLLFESDTPMVSVEIGHGSILIRHPSYIAREEESEAS 228

Query: 480  XXSVYNKPPLANEACSDSNLCSHTLNKFNLSSTQFNGKK---DLGQKKEQE-LHERKDQQ 313
              SV NK    +EA S S   +   +   L S+    +K     GQ  +QE L   K Q 
Sbjct: 229  SLSVDNKQCPMSEAYSFSGAIAMHNDSSRLKSSSLEVEKIGNSTGQGMQQEQLKSDKSQL 288

Query: 312  EELQILGNHNSSICSIELKDVLNYEEFARHITNYDLQDLLKLLPSIDTIGLPDSLQIMFD 133
            E +QILGNH S +CSI+L DV+NYEEF R +TN + Q LLKLLP +DT  LPDSL++MF 
Sbjct: 289  ERVQILGNHESPLCSIDLNDVVNYEEFLRILTNEEQQQLLKLLPVVDTAKLPDSLEVMFS 348

Query: 132  SPQFKENISTFQKLLADGVFDLSSSDVNSECNRTLKKLLLQNLT 1
            S QFKEN++ FQ+LLA+GVFD+S     SE  + LK+L L NL+
Sbjct: 349  SSQFKENLTYFQQLLAEGVFDISLLGAKSEDCKILKRLALSNLS 392


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