BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016827
         (1663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2...   473   e-131
ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis tha...   442   e-122
gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thal...   442   e-121
gb|ABO36632.1| putative recA protein [Solanum lycopersicum]           431   e-118
ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus c...   425   e-116

>ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
            [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed
            protein product [Vitis vinifera]
          Length = 398

 Score =  473 bits (1216), Expect = e-131
 Identities = 239/376 (63%), Positives = 299/376 (79%)
 Frame = +2

Query: 128  STVSSCKLQNTRVNVLAWSNLNTSCFSSAAEPLEFEADELPNEVKTSEKDTALRVAISQL 307
            S++ S  LQ  + + +A   ++T   SS+ E LE E DE  N+VK +EKDTALR+AIS+L
Sbjct: 21   SSLLSSSLQTGKRDAVACIGMHTRSLSSSVEFLEIECDEYGNDVKAAEKDTALRLAISRL 80

Query: 308  AGDFGKESMLSMQRFFQTRRASVVSTGSLKLDLALGVGGLPKGRMVEIFGREASGKTTLA 487
            AGDFG+ESMLS+QRFF +R A V+STGSLKLDLALG+GGLPKGR+VEI+G+EASGKTTLA
Sbjct: 81   AGDFGRESMLSLQRFFVSRHAPVISTGSLKLDLALGIGGLPKGRIVEIYGQEASGKTTLA 140

Query: 488  LHVIKEAQKLGGYCAYLDVENALDPSFAESIGVNTENLLLSQPDSAENLLSIVHTLTKSG 667
            LH+IKEAQKLGGYCAYLDVENA++PSFAES+GVN +NLL+S PDSAENLLS+V+TLTKSG
Sbjct: 141  LHIIKEAQKLGGYCAYLDVENAMNPSFAESMGVNVDNLLISPPDSAENLLSMVNTLTKSG 200

Query: 668  XXXXXXXXXXXXLVPQCKIDCIIGEKHDNIQSRIMTQALRKIQYSLCNSKTLIIFINQVR 847
                        LVPQ ++D +IG  + ++QS+IM QALRKI YSLC S+TLIIF+NQVR
Sbjct: 201  SMDVIVVDSVAALVPQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVR 260

Query: 848  SDLRSGKGFGYADEITCGGNALPFYSTIRLKIIRKELLRSRDKATGLGIRVQVVKNKLAP 1027
            S L+S  GFG  DE+TCGGNAL FY+ +RL+++R  LLR+ DK TGLG+ VQVVKNKLA 
Sbjct: 261  SSLKSSHGFGRLDEVTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGVCVQVVKNKLAH 320

Query: 1028 AMKTAELEIHFGRGICPESEVLEMACDQGVIVKEGNSYFIDGKVLDSRDEAESYLAQNDE 1207
            A K A+L I FGRGIC ESEVLE+AC+ GVI KEG+ Y I+G+  +++ EAE Y+AQN  
Sbjct: 321  ATKKADLGIQFGRGICFESEVLELACEHGVIWKEGSKYIIEGEAFNNKQEAEQYMAQNSG 380

Query: 1208 VLDNVVKTLRAQLFEK 1255
            VL+ +V  LR+ LFE+
Sbjct: 381  VLERIVSFLRSHLFER 396


>ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
            gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA
            repair protein recA homolog 2, mitochondrial; AltName:
            Full=Recombinase A homolog 2; Flags: Precursor
            gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis
            thaliana] gi|22531124|gb|AAM97066.1| putative RecA
            protein [Arabidopsis thaliana] gi|23198012|gb|AAN15533.1|
            putative RecA protein [Arabidopsis thaliana]
            gi|332641343|gb|AEE74864.1| DNA repair protein recA-like
            2 [Arabidopsis thaliana]
          Length = 389

 Score =  442 bits (1138), Expect = e-122
 Identities = 223/366 (60%), Positives = 282/366 (77%)
 Frame = +2

Query: 155  NTRVNVLAWSNLNTSCFSSAAEPLEFEADELPNEVKTSEKDTALRVAISQLAGDFGKESM 334
            N R +VLA S       SS  E  + E DE+P++ K +EKDTAL +A+SQL+GDF K+S 
Sbjct: 23   NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSGDFDKDSK 82

Query: 335  LSMQRFFQTRRASVVSTGSLKLDLALGVGGLPKGRMVEIFGREASGKTTLALHVIKEAQK 514
            LS+QRF++ RR SV+STGSL LDLALGVGGLPKGRMVE++G+EASGKTTLALH+IKEAQK
Sbjct: 83   LSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQK 142

Query: 515  LGGYCAYLDVENALDPSFAESIGVNTENLLLSQPDSAENLLSIVHTLTKSGXXXXXXXXX 694
            LGGYCAYLD ENA+DPS AESIGVNTE LL+S+P SAE +L+IV  LTKSG         
Sbjct: 143  LGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDS 202

Query: 695  XXXLVPQCKIDCIIGEKHDNIQSRIMTQALRKIQYSLCNSKTLIIFINQVRSDLRSGKGF 874
               L PQC++D  +GE++ + QSRIMTQALRKI YS+  S+TLI+F+NQVRS ++S   F
Sbjct: 203  VAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHF 262

Query: 875  GYADEITCGGNALPFYSTIRLKIIRKELLRSRDKATGLGIRVQVVKNKLAPAMKTAELEI 1054
             +A+E+TCGGNALPF++ IRLK+IR  L+++ +K +GL + VQVVKNKLAP  K +EL I
Sbjct: 263  PHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGI 322

Query: 1055 HFGRGICPESEVLEMACDQGVIVKEGNSYFIDGKVLDSRDEAESYLAQNDEVLDNVVKTL 1234
            HFG G   E EVLE+AC+ GVI++EG SYFI+G+V++ +D AE YL +N E LD VV  L
Sbjct: 323  HFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAIL 382

Query: 1235 RAQLFE 1252
            R QLF+
Sbjct: 383  RNQLFK 388


>gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thaliana]
          Length = 389

 Score =  442 bits (1136), Expect = e-121
 Identities = 223/366 (60%), Positives = 281/366 (76%)
 Frame = +2

Query: 155  NTRVNVLAWSNLNTSCFSSAAEPLEFEADELPNEVKTSEKDTALRVAISQLAGDFGKESM 334
            N R +VLA S       SS  E  + E DE+P++ K +EKDTAL +A+SQL+GDF K+S 
Sbjct: 23   NGRRSVLACSGYENRYLSSLVEASDCELDEVPDDRKVAEKDTALHLALSQLSGDFDKDSK 82

Query: 335  LSMQRFFQTRRASVVSTGSLKLDLALGVGGLPKGRMVEIFGREASGKTTLALHVIKEAQK 514
            LS+QRF++ RR SV+STGSL LDLALGVGGLPKGRMVE++G+EASGKTTLALH+IKEAQK
Sbjct: 83   LSLQRFYRKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQK 142

Query: 515  LGGYCAYLDVENALDPSFAESIGVNTENLLLSQPDSAENLLSIVHTLTKSGXXXXXXXXX 694
            LGGYCAYLD ENA+DPS AESIGVNTE LL+S+P SAE +L+IV  LTKSG         
Sbjct: 143  LGGYCAYLDAENAMDPSLAESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDS 202

Query: 695  XXXLVPQCKIDCIIGEKHDNIQSRIMTQALRKIQYSLCNSKTLIIFINQVRSDLRSGKGF 874
               L PQC++D  +GE++ + QSRIMTQALRKI YS+  S+TLI+F+NQVRS ++S   F
Sbjct: 203  VAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHF 262

Query: 875  GYADEITCGGNALPFYSTIRLKIIRKELLRSRDKATGLGIRVQVVKNKLAPAMKTAELEI 1054
             +A+E+TCGGNALPF++ IRLK+IR  L+++ +K  GL + VQVVKNKLAP  K +EL I
Sbjct: 263  PHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKVYGLNVCVQVVKNKLAPGKKKSELGI 322

Query: 1055 HFGRGICPESEVLEMACDQGVIVKEGNSYFIDGKVLDSRDEAESYLAQNDEVLDNVVKTL 1234
            HFG G   E EVLE+AC+ GVI++EG SYFI+G+V++ +D AE YL +N E LD VV  L
Sbjct: 323  HFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAIL 382

Query: 1235 RAQLFE 1252
            R QLF+
Sbjct: 383  RNQLFK 388


>gb|ABO36632.1| putative recA protein [Solanum lycopersicum]
          Length = 395

 Score =  431 bits (1107), Expect = e-118
 Identities = 231/365 (63%), Positives = 277/365 (75%), Gaps = 4/365 (1%)
 Frame = +2

Query: 167  NVLAWSNLNTSCFSSAAEPLEFEADELPNEVKTSEKDTALRVAISQLAGDFGKESMLSMQ 346
            N + W  + ++  SSA    E E DE+ ++ KTSEK +AL  A+SQL GDF KES LS+Q
Sbjct: 28   NGMVWRRMLSAYASSA----EGELDEIQDDTKTSEKASALHSALSQLEGDFCKESRLSLQ 83

Query: 347  RFFQTRRASVVSTGSLKLDLALGVGGLPKGRMVEIFGREASGKTTLALHVIKEAQKLGGY 526
            RFF  RR  V+ TGSL+LDLALG+GGLPKGR+VEI+G+EASGKTTLALHVI+EAQKLGGY
Sbjct: 84   RFFGARRTPVIPTGSLRLDLALGLGGLPKGRIVEIYGQEASGKTTLALHVIREAQKLGGY 143

Query: 527  CAYLDVENALDPSFAESIGVNTENLLLSQPDSAENLLSIVHTLTKSGXXXXXXXXXXXXL 706
            CAYLDVEN ++PS AE+IGVN ENLL+SQPDSAENLLSIV+TLTKSG            L
Sbjct: 144  CAYLDVENGMNPSLAEAIGVNVENLLISQPDSAENLLSIVNTLTKSGSMDVIVVDSVAAL 203

Query: 707  VPQCKIDCIIGEKHDNIQSRIMTQALRKIQYSLCNSKTLIIFINQVRSDLRSGKGF---- 874
            VPQ +ID  + +    +QS+IMTQALRKI YSL NS TLIIFINQVR   RS KG     
Sbjct: 204  VPQLEIDATLCDSPKGLQSKIMTQALRKIHYSLGNSSTLIIFINQVR---RSNKGLVRGS 260

Query: 875  GYADEITCGGNALPFYSTIRLKIIRKELLRSRDKATGLGIRVQVVKNKLAPAMKTAELEI 1054
            G  DE+TCGGNALPFY+ IRL+ IRK+LL++R K TGL I V+VVKNKLAPA   AEL I
Sbjct: 261  GCMDEVTCGGNALPFYAAIRLRTIRKQLLKTRHKITGLRICVKVVKNKLAPAATEAELSI 320

Query: 1055 HFGRGICPESEVLEMACDQGVIVKEGNSYFIDGKVLDSRDEAESYLAQNDEVLDNVVKTL 1234
             +G G C E EVLE+AC+  V++KEG SYFIDG+VL+SR +AE YLA N ++L  +V+TL
Sbjct: 321  QYGGGFCIEPEVLELACEHEVVLKEGGSYFIDGQVLNSRQDAEDYLASNGDILAKIVETL 380

Query: 1235 RAQLF 1249
            R QLF
Sbjct: 381  RDQLF 385


>ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis]
            gi|223526148|gb|EEF28487.1| DNA repair protein reca,
            putative [Ricinus communis]
          Length = 388

 Score =  425 bits (1093), Expect = e-116
 Identities = 215/342 (62%), Positives = 270/342 (78%)
 Frame = +2

Query: 224  LEFEADELPNEVKTSEKDTALRVAISQLAGDFGKESMLSMQRFFQTRRASVVSTGSLKLD 403
            L+FE D+L ++ +  EK   L +A+ +++G+F +ESMLS+ RFF +R+ASV+STGSLKLD
Sbjct: 48   LDFECDKLIDDSEAMEKHNKLFLALKEISGEFCRESMLSLHRFFSSRQASVISTGSLKLD 107

Query: 404  LALGVGGLPKGRMVEIFGREASGKTTLALHVIKEAQKLGGYCAYLDVENALDPSFAESIG 583
            LALG+GGLPKGRMVEI+G+EASGKTTLALH+IKEAQK GGYCAYLD ENALDPS  ES+G
Sbjct: 108  LALGIGGLPKGRMVEIYGQEASGKTTLALHIIKEAQKCGGYCAYLDAENALDPSLVESMG 167

Query: 584  VNTENLLLSQPDSAENLLSIVHTLTKSGXXXXXXXXXXXXLVPQCKIDCIIGEKHDNIQS 763
            VNTENLL+S PDSAENLLS+V TLTKSG            LVPQ ++D ++G   D  QS
Sbjct: 168  VNTENLLISPPDSAENLLSVVDTLTKSGSVDVIVVDSVAALVPQLELDTMLGSTEDR-QS 226

Query: 764  RIMTQALRKIQYSLCNSKTLIIFINQVRSDLRSGKGFGYADEITCGGNALPFYSTIRLKI 943
            RIM+QA+RKI YSL  SKTLIIF+NQVR++++SG+G G  DE TCGGNAL FYS +RL++
Sbjct: 227  RIMSQAVRKINYSLSQSKTLIIFLNQVRANVKSGQGLGQVDEATCGGNALKFYSAVRLRM 286

Query: 944  IRKELLRSRDKATGLGIRVQVVKNKLAPAMKTAELEIHFGRGICPESEVLEMACDQGVIV 1123
             RK LL++ D+ TGL + VQVVKNKLAPAMK AEL I FGRG C ESEVLE+AC+ GVI 
Sbjct: 287  ARKALLKTEDEITGLRVSVQVVKNKLAPAMKKAELGIQFGRGFCSESEVLELACEYGVIR 346

Query: 1124 KEGNSYFIDGKVLDSRDEAESYLAQNDEVLDNVVKTLRAQLF 1249
            +EG++Y I+ +V  ++  AE YLA+N +V D +V+TLR  LF
Sbjct: 347  QEGSTYCIEEEVFSNKHAAEEYLAENYKVHDRIVRTLRTHLF 388