BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016811
         (908 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   5e-55
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    93   3e-51
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...   105   2e-49
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   1e-46
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   103   1e-45

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  100 bits (250), Expect(3) = 5e-55
 Identities = 55/150 (36%), Positives = 81/150 (54%)
 Frame = -3

Query: 459  LLFTDDCYFFFRATHTKANIMRDILNKYELLSG*VVNYSKSDIVFSPNTGAAERVRVCDC 280
            L F DD   F +A+  + +++ DI++KYE  SG  VN SK+++VFS +     R  + + 
Sbjct: 682  LFFADDSILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNV 741

Query: 279  LGVKEKNKPGKYLGMHMCVGKSKREVFGFISDRIQNKLQTWCNKDLS*AGXXXXXXXXXX 100
            LGVKE ++  KYLG+   +G+SK+  F  I +RI  KLQ W  K LS  G          
Sbjct: 742  LGVKEVDRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQ 801

Query: 99   XTPIF*MSLFLISDAICDEIEKKMNAFLWG 10
              P + MS+F +   + DEI   +  F WG
Sbjct: 802  AIPTYMMSVFSLPSGLIDEIHSLLARFWWG 831



 Score = 94.7 bits (234), Expect(3) = 5e-55
 Identities = 45/93 (48%), Positives = 64/93 (68%)
 Frame = -2

Query: 907 LQSILSDKQSAFIERRLLTYNALIAFEINHYIHRKTQGQCEVAGLIIDVAKAYDRLEWSY 728
           L +I+S  QSAF+ RRL+T NAL+AFEI H + RK   +  V  L +D++KAYDR+EW +
Sbjct: 532 LPAIISPNQSAFVPRRLITDNALVAFEIFHAMKRKDANKNGVCALKLDMSKAYDRVEWCF 591

Query: 727 IEMMLAKFGFPQIWIHRVMQCVKTVSYSFQEMG 629
           +E ++ K GF   WI RVM C+ +VS++F   G
Sbjct: 592 LERVMKKMGFCDGWIDRVMACISSVSFTFNVNG 624



 Score = 67.0 bits (162), Expect(3) = 5e-55
 Identities = 29/62 (46%), Positives = 42/62 (67%)
 Frame = -1

Query: 644 FPRDGKIFGDVRPQRGVRQGDPISSYLYILCAEWLTGILRKYEESRLIHGCRVARGAPSI 465
           F  +G + G + P RG+RQGDPIS YL++LCA+  + +L K    + IHG ++ RGAP +
Sbjct: 620 FNVNGVVEGSLSPSRGLRQGDPISPYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVV 679

Query: 464 SH 459
           SH
Sbjct: 680 SH 681


>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 93.2 bits (230), Expect(3) = 3e-51
 Identities = 51/149 (34%), Positives = 80/149 (53%)
 Frame = -3

Query: 459 LLFTDDCYFFFRATHTKANIMRDILNKYELLSG*VVNYSKSDIVFSPNTGAAERVRVCDC 280
           L F DD     RA  + A  +R IL+ YE  SG V+N  KS ++FSPNTG  +R  +   
Sbjct: 260 LFFADDSLILMRARASDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSN 319

Query: 279 LGVKEKNKPGKYLGMHMCVGKSKREVFGFISDRIQNKLQTWCNKDLS*AGXXXXXXXXXX 100
           L + ++    KYLG+ + +GKS+++ F +I  +I +++Q W  K LS AG          
Sbjct: 320 LSITDEASTEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEKLLSKAGKEILIKAVAQ 379

Query: 99  XTPIF*MSLFLISDAICDEIEKKMNAFLW 13
             P + MS F ++  +CDE+   +  + W
Sbjct: 380 SIPTYAMSCFDLTKGLCDELSSIIGRYWW 408



 Score = 90.9 bits (224), Expect(3) = 3e-51
 Identities = 40/97 (41%), Positives = 66/97 (68%)
 Frame = -2

Query: 907 LQSILSDKQSAFIERRLLTYNALIAFEINHYIHRKTQGQCEVAGLIIDVAKAYDRLEWSY 728
           L +I+S+ QSAF+  RL+T N L+A+EI H++    +G   +A + +D++KAYDR+EWS+
Sbjct: 110 LPNIISNSQSAFVPGRLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSF 169

Query: 727 IEMMLAKFGFPQIWIHRVMQCVKTVSYSFQEMGKYLE 617
           +E M+ K GF + W+  +M+CV TV+Y  +    Y +
Sbjct: 170 LENMMRKMGFDEKWVQLIMKCVTTVTYKIKVNDSYTQ 206



 Score = 65.9 bits (159), Expect(3) = 3e-51
 Identities = 27/50 (54%), Positives = 39/50 (78%)
 Frame = -1

Query: 608 PQRGVRQGDPISSYLYILCAEWLTGILRKYEESRLIHGCRVARGAPSISH 459
           PQRG+RQGDP+S YL+I+CAE L+ +L+K E+   I G ++ RGAP ++H
Sbjct: 210 PQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKGKIEGIKICRGAPKVNH 259


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score =  105 bits (262), Expect(3) = 2e-49
 Identities = 56/150 (37%), Positives = 84/150 (56%)
 Frame = -3

Query: 459 LLFTDDCYFFFRATHTKANIMRDILNKYELLSG*VVNYSKSDIVFSPNTGAAERVRVCDC 280
           LLF DD + FFRA   +   ++DIL+ Y   S  ++N  KS+I FS N    ++  + + 
Sbjct: 271 LLFADDSFLFFRANENETRALKDILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNM 330

Query: 279 LGVKEKNKPGKYLGMHMCVGKSKREVFGFISDRIQNKLQTWCNKDLS*AGXXXXXXXXXX 100
           L V E     KYLG+   +G+SK+ +F +I DRI N++    +K LS AG          
Sbjct: 331 LWVSEGIGIRKYLGLPSMIGRSKKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQ 390

Query: 99  XTPIF*MSLFLISDAICDEIEKKMNAFLWG 10
             P + MS+FL+  +I D+IEK +N+F WG
Sbjct: 391 AIPSYCMSVFLLPHSIADDIEKMLNSFWWG 420



 Score = 73.6 bits (179), Expect(3) = 2e-49
 Identities = 38/87 (43%), Positives = 52/87 (59%)
 Frame = -2

Query: 907 LQSILSDKQSAFIERRLLTYNALIAFEINHYIHRKTQGQCEVAGLIIDVAKAYDRLEWSY 728
           L   +S +QS F+  R +T N LIA EI HY+  KT G    A L ID++K YDR++W+Y
Sbjct: 121 LDKCISVEQSGFVAGRTITDNILIALEIIHYLKCKTWGIKGEAALKIDISKTYDRVDWNY 180

Query: 727 IEMMLAKFGFPQIWIHRVMQCVKTVSY 647
           +  ++ K GF  IWI  +   V  VSY
Sbjct: 181 LFSIMEKMGFNPIWIKWMRMSVTMVSY 207



 Score = 65.1 bits (157), Expect(3) = 2e-49
 Identities = 25/54 (46%), Positives = 42/54 (77%)
 Frame = -1

Query: 620 GDVRPQRGVRQGDPISSYLYILCAEWLTGILRKYEESRLIHGCRVARGAPSISH 459
           G + P RG+RQGDP+S YL+ILCAE ++ ++++ E + ++HG +V + AP++SH
Sbjct: 217 GPIYPGRGLRQGDPLSPYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSH 270


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 94.4 bits (233), Expect(3) = 1e-46
 Identities = 54/155 (34%), Positives = 79/155 (50%)
 Frame = -3

Query: 471  EYISLLFTDDCYFFFRATHTKANIMRDILNKYELLSG*VVNYSKSDIVFSPNTGAAERVR 292
            E   LLF DD   F RAT  +   + DILNKYE  SG  +NY KS++ FS      ++  
Sbjct: 682  EISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEE 741

Query: 291  VCDCLGVKEKNKPGKYLGMHMCVGKSKREVFGFISDRIQNKLQTWCNKDLS*AGXXXXXX 112
            +   L +++ ++  KYLG+    G+SK+ +F  + DR+  KL+ W  K LS AG      
Sbjct: 742  LITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIK 801

Query: 111  XXXXXTPIF*MSLFLISDAICDEIEKKMNAFLWGG 7
                  P + M ++ +  A+  EI   M  F WGG
Sbjct: 802  AVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGG 836



 Score = 80.9 bits (198), Expect(3) = 1e-46
 Identities = 37/89 (41%), Positives = 58/89 (65%)
 Frame = -2

Query: 907 LQSILSDKQSAFIERRLLTYNALIAFEINHYIHRKTQGQCEVAGLIIDVAKAYDRLEWSY 728
           L  I ++ QSAF+  RL++ N+LIA EI H + ++   +  +  + +D++KAYDR+EW +
Sbjct: 536 LPCIATENQSAFVPGRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGF 595

Query: 727 IEMMLAKFGFPQIWIHRVMQCVKTVSYSF 641
           +  +L   GF   W++ VM CV TVSYSF
Sbjct: 596 LRKLLLTMGFDGRWVNLVMSCVATVSYSF 624



 Score = 59.3 bits (142), Expect(3) = 1e-46
 Identities = 25/59 (42%), Positives = 41/59 (69%)
 Frame = -1

Query: 635 DGKIFGDVRPQRGVRQGDPISSYLYILCAEWLTGILRKYEESRLIHGCRVARGAPSISH 459
           +G++ G V P RG+RQGDP+S +L+IL A+  + ++++   S+ IHG + +R  P ISH
Sbjct: 627 NGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISH 685


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score =  103 bits (257), Expect(3) = 1e-45
 Identities = 55/152 (36%), Positives = 84/152 (55%)
 Frame = -3

Query: 459  LLFTDDCYFFFRATHTKANIMRDILNKYELLSG*VVNYSKSDIVFSPNTGAAERVRVCDC 280
            LLF DDC+ FF+A   +A  M++IL  YE  SG  +N+ KS++ +S N   A +  +   
Sbjct: 1103 LLFADDCFLFFKAKSGQAQGMKNILEMYESSSGQSINFQKSEVFYSRNVDDAVKASISQI 1162

Query: 279  LGVKEKNKPGKYLGMHMCVGKSKREVFGFISDRIQNKLQTWCNKDLS*AGXXXXXXXXXX 100
            LGV++    GKYLG+   VG+S+   F F+ +R+  K+ +W +K LS AG          
Sbjct: 1163 LGVQQVMGTGKYLGVPSMVGRSRISTFKFVKERVWKKINSWSSKCLSQAGRETLIKSVLQ 1222

Query: 99   XTPIF*MSLFLISDAICDEIEKKMNAFLWGGG 4
              P + MS+F I  +I  +IEK ++     GG
Sbjct: 1223 SIPFYIMSIFAIPKSIIVDIEKMLSIHKKEGG 1254



 Score = 64.3 bits (155), Expect(3) = 1e-45
 Identities = 28/59 (47%), Positives = 42/59 (71%)
 Frame = -1

Query: 635  DGKIFGDVRPQRGVRQGDPISSYLYILCAEWLTGILRKYEESRLIHGCRVARGAPSISH 459
            +G+  G + P RG+RQGDP+S YL+I+CAE L+ ++R+ E S  I G ++ + AP ISH
Sbjct: 1044 NGEKIGPIIPGRGLRQGDPLSPYLFIICAEGLSSLIRQAEGSGTISGAKICKNAPIISH 1102



 Score = 63.2 bits (152), Expect(3) = 1e-45
 Identities = 32/88 (36%), Positives = 45/88 (51%)
 Frame = -2

Query: 907  LQSILSDKQSAFIERRLLTYNALIAFEINHYIHRKTQGQCEVAGLIIDVAKAYDRLEWSY 728
            L   +S+ QSAF+  R +  NAL A EI HYI                ++ AYDR+ W Y
Sbjct: 967  LSKCISENQSAFVPERSILDNALAAIEIVHYIQY--------------ISTAYDRINWEY 1012

Query: 727  IEMMLAKFGFPQIWIHRVMQCVKTVSYS 644
            +  ++ K GF   W   +M CV++V YS
Sbjct: 1013 LRSIMGKMGFCSKWSEWIMMCVESVDYS 1040