BLASTX nr result

ID: Bupleurum21_contig00016803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016803
         (1124 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263...   521   e-145
emb|CBI40485.3| unnamed protein product [Vitis vinifera]              521   e-145
ref|XP_002533910.1| conserved hypothetical protein [Ricinus comm...   513   e-143
ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|2...   512   e-143
ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|2...   511   e-142

>ref|XP_002276755.2| PREDICTED: uncharacterized protein LOC100263682 [Vitis vinifera]
          Length = 450

 Score =  521 bits (1341), Expect = e-145
 Identities = 226/339 (66%), Positives = 280/339 (82%), Gaps = 6/339 (1%)
 Frame = +1

Query: 4    KCDLFTGEWVEDPSGPFYTNNSCRFIEAHENCMQNGRPDSGYIYWRWSPRDCALPKFNPE 183
            KCD+FTG+W+ DPSGP YTN SC  IE H+NCM+NGRPDSGY+YWRW+PRDC LP+FNPE
Sbjct: 101  KCDIFTGDWIPDPSGPVYTNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPE 160

Query: 184  RFLELMRNKAMAFIGDSISRNHVQSLLCTLSQVEEGVDVYHDENYATRRWYFPSYNFTLS 363
            RFL+LMRNK+ AFIGDSISRNHVQSLLC LSQVEE V+VYHDE Y ++RW+FPS+NFTLS
Sbjct: 161  RFLDLMRNKSWAFIGDSISRNHVQSLLCILSQVEEAVEVYHDEEYRSKRWHFPSHNFTLS 220

Query: 364  VFWSPFLVKAAIYENIDGVSSDIPKLNLDELDPEWITRCREYDYIEIGGGKWYLKTAIYY 543
            V W+PFL++A I+E+I+GVSS    L+LD+LD  W  + + +DY+ I GGKW+LKTAIYY
Sbjct: 221  VIWTPFLIEADIFEDINGVSSSDVMLHLDKLDKNWTEQYKSFDYVVIAGGKWFLKTAIYY 280

Query: 544  ENNTIVGCHNCPQENITKVGFQYAYQKAVNLALEFITSSEHKAYTFFRTSTPDHFENGEW 723
             N+T++GCH CP  N+T++GF++AY+KA+ + L F+T S+HK + F RT+TPDHFENGEW
Sbjct: 281  VNDTVMGCHYCPGRNLTELGFEFAYRKALQMILNFVTGSDHKGFVFLRTTTPDHFENGEW 340

Query: 724  NTGGYCNRTVPYKEGDVDLIDADVAMRGIELEEFKK------AEKGSNLRLFDTTHLSLL 885
             +GG C R VP+KEG++D+ D D  MR IELEEF+K       E+G  L+L DTTHLSLL
Sbjct: 341  FSGGTCKRMVPFKEGEIDMRDIDRIMRDIELEEFEKVVADAGTERGVILKLLDTTHLSLL 400

Query: 886  RPDGHPGPYRTYHPFSKDKNAKVQLDCLHWCLPGPIDSW 1002
            RPDGHPGPYR +HPF++DKNA VQ DCLHWCLPGPIDSW
Sbjct: 401  RPDGHPGPYRQFHPFAEDKNATVQNDCLHWCLPGPIDSW 439


>emb|CBI40485.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  521 bits (1341), Expect = e-145
 Identities = 226/339 (66%), Positives = 280/339 (82%), Gaps = 6/339 (1%)
 Frame = +1

Query: 4    KCDLFTGEWVEDPSGPFYTNNSCRFIEAHENCMQNGRPDSGYIYWRWSPRDCALPKFNPE 183
            KCD+FTG+W+ DPSGP YTN SC  IE H+NCM+NGRPDSGY+YWRW+PRDC LP+FNPE
Sbjct: 71   KCDIFTGDWIPDPSGPVYTNESCHAIENHQNCMRNGRPDSGYLYWRWNPRDCELPRFNPE 130

Query: 184  RFLELMRNKAMAFIGDSISRNHVQSLLCTLSQVEEGVDVYHDENYATRRWYFPSYNFTLS 363
            RFL+LMRNK+ AFIGDSISRNHVQSLLC LSQVEE V+VYHDE Y ++RW+FPS+NFTLS
Sbjct: 131  RFLDLMRNKSWAFIGDSISRNHVQSLLCILSQVEEAVEVYHDEEYRSKRWHFPSHNFTLS 190

Query: 364  VFWSPFLVKAAIYENIDGVSSDIPKLNLDELDPEWITRCREYDYIEIGGGKWYLKTAIYY 543
            V W+PFL++A I+E+I+GVSS    L+LD+LD  W  + + +DY+ I GGKW+LKTAIYY
Sbjct: 191  VIWTPFLIEADIFEDINGVSSSDVMLHLDKLDKNWTEQYKSFDYVVIAGGKWFLKTAIYY 250

Query: 544  ENNTIVGCHNCPQENITKVGFQYAYQKAVNLALEFITSSEHKAYTFFRTSTPDHFENGEW 723
             N+T++GCH CP  N+T++GF++AY+KA+ + L F+T S+HK + F RT+TPDHFENGEW
Sbjct: 251  VNDTVMGCHYCPGRNLTELGFEFAYRKALQMILNFVTGSDHKGFVFLRTTTPDHFENGEW 310

Query: 724  NTGGYCNRTVPYKEGDVDLIDADVAMRGIELEEFKK------AEKGSNLRLFDTTHLSLL 885
             +GG C R VP+KEG++D+ D D  MR IELEEF+K       E+G  L+L DTTHLSLL
Sbjct: 311  FSGGTCKRMVPFKEGEIDMRDIDRIMRDIELEEFEKVVADAGTERGVILKLLDTTHLSLL 370

Query: 886  RPDGHPGPYRTYHPFSKDKNAKVQLDCLHWCLPGPIDSW 1002
            RPDGHPGPYR +HPF++DKNA VQ DCLHWCLPGPIDSW
Sbjct: 371  RPDGHPGPYRQFHPFAEDKNATVQNDCLHWCLPGPIDSW 409


>ref|XP_002533910.1| conserved hypothetical protein [Ricinus communis]
            gi|223526131|gb|EEF28475.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 457

 Score =  513 bits (1321), Expect = e-143
 Identities = 223/339 (65%), Positives = 283/339 (83%), Gaps = 5/339 (1%)
 Frame = +1

Query: 1    EKCDLFTGEWVEDPSGPFYTNNSCRFIEAHENCMQNGRPDSGYIYWRWSPRDCALPKFNP 180
            ++CDLFTG WV DP+GPFYTN SC  IE H+NCM+NGRPDSGY+YWRW+P+ C LP+FNP
Sbjct: 107  DQCDLFTGNWVPDPAGPFYTNQSCLAIEGHQNCMKNGRPDSGYLYWRWNPQGCDLPRFNP 166

Query: 181  ERFLELMRNKAMAFIGDSISRNHVQSLLCTLSQVEEGVDVYHDENYATRRWYFPSYNFTL 360
            ++FL+LM+NK+ AFIGDSISRNHVQSLLC LSQVE+ ++VYHDE Y ++ W+FP++NFTL
Sbjct: 167  KKFLDLMKNKSWAFIGDSISRNHVQSLLCILSQVEQAIEVYHDEEYRSKIWHFPAHNFTL 226

Query: 361  SVFWSPFLVKAAIYENIDGVSSDIPKLNLDELDPEWITRCREYDYIEIGGGKWYLKTAIY 540
            SV W+PFL++A I+E+++GVSS   +L+LDELD +W  + + +DY  I GGKW+LKTAIY
Sbjct: 227  SVIWTPFLIQADIFEDMNGVSSSEIQLHLDELDSKWSKQYKNFDYAVIAGGKWFLKTAIY 286

Query: 541  YENNTIVGCHNCPQENITKVGFQYAYQKAVNLALEFITSSEHKAYTFFRTSTPDHFENGE 720
            +EN+TI GCH CP +N+T++GF YAY+KA+ L  +F+ +S+H A  FFRT+TPDHFENGE
Sbjct: 287  HENSTITGCHYCPGKNLTELGFDYAYRKALRLIFDFMANSDHGATVFFRTTTPDHFENGE 346

Query: 721  WNTGGYCNRTVPYKEGDVDLIDADVAMRGIELEEFKK-----AEKGSNLRLFDTTHLSLL 885
            W +GG CNRTVP+KEG+VD+ D D AMR IELEEF++     A+ G+  +L DTT LSLL
Sbjct: 347  WFSGGTCNRTVPFKEGEVDMRDVDTAMRNIELEEFERAAILGAKTGAIFKLLDTTRLSLL 406

Query: 886  RPDGHPGPYRTYHPFSKDKNAKVQLDCLHWCLPGPIDSW 1002
            RPDGHPGPYR +HPFSKDKNAKVQ DCLHWCLPGPID+W
Sbjct: 407  RPDGHPGPYRQFHPFSKDKNAKVQNDCLHWCLPGPIDAW 445


>ref|XP_002320186.1| predicted protein [Populus trichocarpa] gi|222860959|gb|EEE98501.1|
            predicted protein [Populus trichocarpa]
          Length = 442

 Score =  512 bits (1318), Expect = e-143
 Identities = 228/338 (67%), Positives = 276/338 (81%), Gaps = 5/338 (1%)
 Frame = +1

Query: 4    KCDLFTGEWVEDPSGPFYTNNSCRFIEAHENCMQNGRPDSGYIYWRWSPRDCALPKFNPE 183
            KCDLF G+W+ DPSGPFYTN SC  IE H+NCM+NGRPDSGY++WRW+PR C+LP+FNP+
Sbjct: 90   KCDLFVGDWIPDPSGPFYTNQSCLQIEGHQNCMKNGRPDSGYLHWRWNPRGCSLPRFNPK 149

Query: 184  RFLELMRNKAMAFIGDSISRNHVQSLLCTLSQVEEGVDVYHDENYATRRWYFPSYNFTLS 363
            +FL LMRNK+ AFIGDSISRNHVQSLLCTLSQVE+ V+VYHDE Y +R W FPS+NFTLS
Sbjct: 150  KFLRLMRNKSWAFIGDSISRNHVQSLLCTLSQVEQAVEVYHDEEYRSRIWRFPSHNFTLS 209

Query: 364  VFWSPFLVKAAIYENIDGVSSDIPKLNLDELDPEWITRCREYDYIEIGGGKWYLKTAIYY 543
            V W+PFL+KA I+E+++GVSS   +L+LD+LD +W  + R  DY  I GGKW+LKTAIY+
Sbjct: 210  VIWTPFLIKADIFEDMNGVSSSEIQLHLDKLDKKWTDQYRNLDYAIIAGGKWFLKTAIYH 269

Query: 544  ENNTIVGCHNCPQENITKVGFQYAYQKAVNLALEFITSSEHKAYTFFRTSTPDHFENGEW 723
            ENN + GCH CP +N+T++GF YAY+KA+ L   FIT+S HKA  FFRT+TPDHFENGEW
Sbjct: 270  ENNVVTGCHYCPGKNLTELGFDYAYRKAMQLIFNFITNSGHKALAFFRTTTPDHFENGEW 329

Query: 724  NTGGYCNRTVPYKEGDVDLIDADVAMRGIELEEFKKA-----EKGSNLRLFDTTHLSLLR 888
             +GG CNR VP+KE +V++ D D  M  IELEEF+KA     EKG  L+L DTT LSLLR
Sbjct: 330  FSGGTCNRKVPFKEDEVNMTDVDTIMHNIELEEFEKATALGPEKGVALKLLDTTRLSLLR 389

Query: 889  PDGHPGPYRTYHPFSKDKNAKVQLDCLHWCLPGPIDSW 1002
            PDGHPGPYR + PF++DKNAKVQ DCLHWCLPGPIDSW
Sbjct: 390  PDGHPGPYRQFQPFAEDKNAKVQNDCLHWCLPGPIDSW 427


>ref|XP_002301401.1| predicted protein [Populus trichocarpa] gi|222843127|gb|EEE80674.1|
            predicted protein [Populus trichocarpa]
          Length = 441

 Score =  511 bits (1316), Expect = e-142
 Identities = 226/338 (66%), Positives = 275/338 (81%), Gaps = 5/338 (1%)
 Frame = +1

Query: 4    KCDLFTGEWVEDPSGPFYTNNSCRFIEAHENCMQNGRPDSGYIYWRWSPRDCALPKFNPE 183
            KCDLFTGEW+ DPSGPFYTN SC  IE H+NCM+NGRPDSGY+YWRWSPR C+LPKFNP+
Sbjct: 89   KCDLFTGEWIPDPSGPFYTNQSCLQIEGHQNCMKNGRPDSGYLYWRWSPRGCSLPKFNPK 148

Query: 184  RFLELMRNKAMAFIGDSISRNHVQSLLCTLSQVEEGVDVYHDENYATRRWYFPSYNFTLS 363
            +FL LMRNK+ AFIGDSISRNHVQSLLC LSQVE+ V+ YHDE Y ++ W+F ++NFTLS
Sbjct: 149  KFLHLMRNKSWAFIGDSISRNHVQSLLCILSQVEQAVETYHDEEYRSKIWHFRTHNFTLS 208

Query: 364  VFWSPFLVKAAIYENIDGVSSDIPKLNLDELDPEWITRCREYDYIEIGGGKWYLKTAIYY 543
            V W+PFL+KA I+E+++GVSS   +L+LDELD +W  + R +DY  + GGKW+LKTAIY+
Sbjct: 209  VIWTPFLIKADIFEDMNGVSSSEIQLHLDELDKKWTDQYRNFDYAIVAGGKWFLKTAIYH 268

Query: 544  ENNTIVGCHNCPQENITKVGFQYAYQKAVNLALEFITSSEHKAYTFFRTSTPDHFENGEW 723
            ENN + GCH CP +N+T++GF YAY+KA+ L   FIT+S HK   F RT+TPDHFENGEW
Sbjct: 269  ENNVVTGCHYCPGKNLTELGFDYAYRKAIQLIFNFITNSGHKTLAFLRTTTPDHFENGEW 328

Query: 724  NTGGYCNRTVPYKEGDVDLIDADVAMRGIELEEFKKA-----EKGSNLRLFDTTHLSLLR 888
             +GG C+R VP+KEG+V++ D D  MR IELEEF KA     +KG  L+L DTT LSLLR
Sbjct: 329  FSGGTCDRKVPFKEGEVNMTDVDTIMRNIELEEFAKAAALGPDKGVVLKLLDTTRLSLLR 388

Query: 889  PDGHPGPYRTYHPFSKDKNAKVQLDCLHWCLPGPIDSW 1002
            PDGHPGPYR + PF++DKNAKVQ DCLHWCLPGPIDSW
Sbjct: 389  PDGHPGPYRQFQPFAEDKNAKVQNDCLHWCLPGPIDSW 426


Top