BLASTX nr result

ID: Bupleurum21_contig00016801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016801
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28616.3| unnamed protein product [Vitis vinifera]               59   4e-07
emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]    59   4e-07
ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin...    55   6e-06
ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containin...    55   6e-06

>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 321 LQNRRLMSLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFYNR 199
           LQ RRLM L+LLD K+  H RA STGA + SPTHSP+F+N+
Sbjct: 426 LQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 466


>emb|CAN69883.1| hypothetical protein VITISV_031889 [Vitis vinifera]
          Length = 682

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -1

Query: 321 LQNRRLMSLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFYNR 199
           LQ RRLM L+LLD K+  H RA STGA + SPTHSP+F+N+
Sbjct: 504 LQGRRLMGLQLLDVKKQQHHRALSTGAPIPSPTHSPSFFNQ 544


>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 700

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -1

Query: 321 LQNRRLMSLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFYNR 199
           LQ+RRLM L+LLD K+ +HQRA STG+ + SPTHSPN +N+
Sbjct: 500 LQSRRLMGLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 539


>ref|XP_003533499.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 696

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 34/41 (82%)
 Frame = -1

Query: 321 LQNRRLMSLKLLDAKRSNHQRAYSTGAVVSSPTHSPNFYNR 199
           LQ+RRLM L+LLD K+ +HQRA STG+ + SPTHSPN +N+
Sbjct: 494 LQSRRLMGLQLLDIKK-HHQRALSTGSPIPSPTHSPNMFNQ 533


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