BLASTX nr result
ID: Bupleurum21_contig00016784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00016784
(886 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis... 113 1e-62
ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [... 111 5e-60
ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [... 108 8e-60
ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|2... 104 2e-59
emb|CAA98163.1| RAB1X [Lotus japonicus] 108 3e-59
>ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product
[Vitis vinifera]
Length = 211
Score = 113 bits (283), Expect(3) = 1e-62
Identities = 55/63 (87%), Positives = 60/63 (95%)
Frame = -3
Query: 440 VYDVTKRETFTNLSDVWAKEVELYSNNRNCVKMLVGNKVDIESERVVSREEGISLAKELG 261
VYDVT+RE+FTNLSDVWAKEVELYS N++CVKMLVGNKVD ESERVVSREEGI+LAKE G
Sbjct: 92 VYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKVDRESERVVSREEGIALAKEHG 151
Query: 260 CLF 252
CLF
Sbjct: 152 CLF 154
Score = 96.3 bits (238), Expect(3) = 1e-62
Identities = 48/56 (85%), Positives = 51/56 (91%), Gaps = 1/56 (1%)
Frame = -1
Query: 175 ECSAKTRENVEHCFEELSLKIMEVPSLLEEGSTVVKRNILKQKPESQ-APSGGCCS 11
ECSAKTRENVE CFEEL+LKIMEVPSLLEEGSTV KRNILK KPE+Q P+GGCCS
Sbjct: 156 ECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVGKRNILKPKPENQPPPTGGCCS 211
Score = 78.2 bits (191), Expect(3) = 1e-62
Identities = 40/63 (63%), Positives = 47/63 (74%)
Frame = -2
Query: 738 NYDLSFKILLIGDSAVGKSSLLLTFISQSLQDISPTIGVDFXXXXXXXXXXXXXXXIWDT 559
+YDLSFKILLIGDSAVGKSSLL++FIS S++D++PTIGVDF IWDT
Sbjct: 10 SYDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDT 69
Query: 558 AGQ 550
AGQ
Sbjct: 70 AGQ 72
>ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 111 bits (277), Expect(3) = 5e-60
Identities = 51/63 (80%), Positives = 61/63 (96%)
Frame = -3
Query: 440 VYDVTKRETFTNLSDVWAKEVELYSNNRNCVKMLVGNKVDIESERVVSREEGISLAKELG 261
VYDVT+R+TFTNLS+VW+KEVELYS N+NCVKMLVGNKVD +SERVVS+EEG++LA+ELG
Sbjct: 92 VYDVTRRDTFTNLSEVWSKEVELYSTNQNCVKMLVGNKVDRDSERVVSKEEGLALAEELG 151
Query: 260 CLF 252
CLF
Sbjct: 152 CLF 154
Score = 90.5 bits (223), Expect(3) = 5e-60
Identities = 46/57 (80%), Positives = 48/57 (84%), Gaps = 2/57 (3%)
Frame = -1
Query: 175 ECSAKTRENVEHCFEELSLKIMEVPSLLEEGSTVVKRNILKQKPESQAPS--GGCCS 11
ECSAKTRENVE CFEEL+LKIMEVPSLLEEGST VKRNILKQ+ E S GGCCS
Sbjct: 156 ECSAKTRENVERCFEELALKIMEVPSLLEEGSTAVKRNILKQQQEQPQASEFGGCCS 212
Score = 77.8 bits (190), Expect(3) = 5e-60
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = -2
Query: 735 YDLSFKILLIGDSAVGKSSLLLTFISQSLQDISPTIGVDFXXXXXXXXXXXXXXXIWDTA 556
YDLSFKILLIGDSAVGKSSLL++FIS S +DI+PTIGVDF IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 555 GQ 550
GQ
Sbjct: 71 GQ 72
>ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 108 bits (271), Expect(3) = 8e-60
Identities = 51/63 (80%), Positives = 60/63 (95%)
Frame = -3
Query: 440 VYDVTKRETFTNLSDVWAKEVELYSNNRNCVKMLVGNKVDIESERVVSREEGISLAKELG 261
VYDVT+R+TFTNLS VW+KEVELYS N+NCVKMLVGNKVD +SERVVS+EEG++LA+ELG
Sbjct: 92 VYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKVDRDSERVVSKEEGLALAEELG 151
Query: 260 CLF 252
CLF
Sbjct: 152 CLF 154
Score = 92.0 bits (227), Expect(3) = 8e-60
Identities = 46/56 (82%), Positives = 49/56 (87%), Gaps = 1/56 (1%)
Frame = -1
Query: 175 ECSAKTRENVEHCFEELSLKIMEVPSLLEEGSTVVKRNILKQKPESQAPS-GGCCS 11
ECSAKTRENVE CFEEL+LKIMEVPSLLEEGST VKRNILKQ+ + QA GGCCS
Sbjct: 156 ECSAKTRENVERCFEELALKIMEVPSLLEEGSTAVKRNILKQQQQPQASEFGGCCS 211
Score = 77.8 bits (190), Expect(3) = 8e-60
Identities = 41/62 (66%), Positives = 45/62 (72%)
Frame = -2
Query: 735 YDLSFKILLIGDSAVGKSSLLLTFISQSLQDISPTIGVDFXXXXXXXXXXXXXXXIWDTA 556
YDLSFKILLIGDSAVGKSSLL++FIS S +DI+PTIGVDF IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 555 GQ 550
GQ
Sbjct: 71 GQ 72
>ref|XP_002326383.1| predicted protein [Populus trichocarpa] gi|222833576|gb|EEE72053.1|
predicted protein [Populus trichocarpa]
Length = 213
Score = 104 bits (259), Expect(3) = 2e-59
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = -3
Query: 440 VYDVTKRETFTNLSDVWAKEVELYSNNRNCVKMLVGNKVDIESERVVSREEGISLAKELG 261
VYDVT+RETFTNLSDVW KEV+LYS N++CVKMLVGNKVD +SER V+R+EG+SLAKE G
Sbjct: 93 VYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKVDKDSERDVTRDEGMSLAKEHG 152
Query: 260 CLF 252
C F
Sbjct: 153 CTF 155
Score = 95.5 bits (236), Expect(3) = 2e-59
Identities = 46/57 (80%), Positives = 50/57 (87%), Gaps = 2/57 (3%)
Frame = -1
Query: 175 ECSAKTRENVEHCFEELSLKIMEVPSLLEEGSTVVKRNILKQKPESQAPS--GGCCS 11
ECSAKTR+NVE CFEEL+LKIMEVPSL+EEGST VKRNILKQKP+ PS GGCCS
Sbjct: 157 ECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAVKRNILKQKPDQHPPSSGGGCCS 213
Score = 77.4 bits (189), Expect(3) = 2e-59
Identities = 40/63 (63%), Positives = 46/63 (73%)
Frame = -2
Query: 738 NYDLSFKILLIGDSAVGKSSLLLTFISQSLQDISPTIGVDFXXXXXXXXXXXXXXXIWDT 559
+YDLSFKILLIGDS VGKSSLL++FIS S++DI+PTIGVDF IWDT
Sbjct: 11 SYDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDT 70
Query: 558 AGQ 550
AGQ
Sbjct: 71 AGQ 73
>emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 108 bits (269), Expect(3) = 3e-59
Identities = 50/62 (80%), Positives = 59/62 (95%)
Frame = -3
Query: 440 VYDVTKRETFTNLSDVWAKEVELYSNNRNCVKMLVGNKVDIESERVVSREEGISLAKELG 261
VYDVTKRETFTNLS+VW+KE+ELYSNN++CVKMLVGNKVD ++ R VSREEG++LAKELG
Sbjct: 89 VYDVTKRETFTNLSEVWSKELELYSNNQDCVKMLVGNKVDRDAARAVSREEGLALAKELG 148
Query: 260 CL 255
CL
Sbjct: 149 CL 150
Score = 93.2 bits (230), Expect(3) = 3e-59
Identities = 47/56 (83%), Positives = 48/56 (85%), Gaps = 1/56 (1%)
Frame = -1
Query: 175 ECSAKTRENVEHCFEELSLKIMEVPSLLEEGSTVVKRNILKQKPESQAPS-GGCCS 11
ECSAKTRENVE CFEEL+LKIME PSLLEEGST VKRNILKQK E QA GGCCS
Sbjct: 153 ECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAVKRNILKQKQEPQASQHGGCCS 208
Score = 75.5 bits (184), Expect(3) = 3e-59
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -2
Query: 735 YDLSFKILLIGDSAVGKSSLLLTFISQSLQDISPTIGVDFXXXXXXXXXXXXXXXIWDTA 556
YDLSFKILLIGDS VGKSSLL++FIS S++D SPTIGVDF +WDTA
Sbjct: 8 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRLKLTLWDTA 67
Query: 555 GQ 550
GQ
Sbjct: 68 GQ 69