BLASTX nr result

ID: Bupleurum21_contig00016779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016779
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-l...   103   3e-20
gb|ACU19107.1| unknown [Glycine max]                                   96   7e-18
ref|XP_003549698.1| PREDICTED: WD repeat-containing protein 76-l...    96   1e-17
ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|XP_003542617.1| PREDICTED: WD repeat-containing protein 76-l...    76   9e-12

>ref|XP_002264232.1| PREDICTED: WD repeat-containing protein 76-like [Vitis vinifera]
          Length = 489

 Score =  103 bits (258), Expect = 3e-20
 Identities = 80/266 (30%), Positives = 122/266 (45%), Gaps = 34/266 (12%)
 Frame = +2

Query: 89  YEQQRLDNIKRNAEKLAALNIHSTIDKLAASSKRQRIETIPIQVSSEKK----STIGVRR 256
           YE++RL+NI+RN E +A+L +HS    L+  +KR+R+E+   +VS +KK    S I +RR
Sbjct: 9   YERRRLENIRRNNEMVASLKLHSKAAALSEEAKRRRVESKSNKVSPKKKPKTESPIVIRR 68

Query: 257 SLRCRGIAPAPE----------EIPIKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXIKEP 406
           SLR RG+ P             E  IK P                            K P
Sbjct: 69  SLRTRGLPPDFSSGNGLKDEFVESMIKGPKSPSTPEGS-------------------KSP 109

Query: 407 PRDVGPIKMADAFVTSALNNNNRRFIKTILGVPKNSQISDT---SNDDKI---------- 547
               GP+ + D           R F+  ILGV K SQ+ ++   S DD++          
Sbjct: 110 SLPEGPLSIRD-----------RVFLDKILGVSKESQLRNSDKCSADDEVDEKKPLDCLI 158

Query: 548 ------GCNSKV-LASLRYGQRPITQVWPGTVLSMCFLPSNDRRMVVAGSDNGRLGFWNV 706
                 G    V L S+      I ++ PG ++++ F P  D  M+VAG  +G +GFW+V
Sbjct: 159 KRESRGGVEGSVDLGSMTLNAENIARIMPGRIMNLRFFPCIDSTMIVAGDKSGHIGFWDV 218

Query: 707 DPVDDEDRWYIYELHHGAVSGIVFEQ 784
           D   + D  ++Y+ H   VSGI+ ++
Sbjct: 219 DCEKERDGVFLYQPHKDPVSGILIQE 244


>gb|ACU19107.1| unknown [Glycine max]
          Length = 460

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
 Frame = +2

Query: 83  NKYEQQRLDNIKRNAEKLAALNIHSTIDKLAASSKRQRIETIPIQVSSEKK----STIGV 250
           N YE++RL+NI+RN E +AAL +HS   +L+   + QR+ T    + SEKK    + I +
Sbjct: 7   NDYERKRLENIRRNDEMMAALKLHSKATQLSNFKRSQRVGTKSYNMKSEKKPKTETPIVI 66

Query: 251 RRSLRCRGIAPAPEEIPIKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXIKEPPRDVGPIK 430
           RRSLR RGI P  + +   S                             K    ++GPI 
Sbjct: 67  RRSLRTRGIPPDSKGLVGDS--------------------VGPTTPTKTKPSVVNLGPIS 106

Query: 431 MADAFVTSALNNNNRRFIKTILGVPKNSQISDTSNDDKIGCNSKVLASLRYGQRPITQVW 610
           MADA  ++   +++  F+++++G+ +          +K+   S  L SL    + I +V 
Sbjct: 107 MADARESA---HSDSSFVESLMGIAQLEAQDVRVEKEKVEA-SLGLESLYLDPKNIARVV 162

Query: 611 PGTVLSMCFLPSNDRRMVVAGSDNGRLGFWNVDPVDDEDRWYIYELHHGAVSGIVFE 781
           PG + S+ F PS+  +MV  G+  G +GFWNV         ++Y  H   +SGI+ +
Sbjct: 163 PGRITSLRFFPSSSVKMVAVGNKFGNVGFWNV----GGSEVHLYRPHRAPISGILIQ 215


>ref|XP_003549698.1| PREDICTED: WD repeat-containing protein 76-like [Glycine max]
          Length = 460

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
 Frame = +2

Query: 83  NKYEQQRLDNIKRNAEKLAALNIHSTIDKLAASSKRQRIETIPIQVSSEKK----STIGV 250
           N YE++RL+NI+RN E +AAL +HS   +L+   + QR+ T    + SEKK    + I +
Sbjct: 7   NDYERKRLENIRRNDEMMAALKLHSKATQLSNFKRSQRVGTKSYNMKSEKKPKTETPIVI 66

Query: 251 RRSLRCRGIAPAPEEIPIKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXIKEPPRDVGPIK 430
           RRSLR RGI P  + +   S                             K    ++GPI 
Sbjct: 67  RRSLRTRGIPPDSKGLVGDS--------------------VGPTTPTKTKPSVVNLGPIS 106

Query: 431 MADAFVTSALNNNNRRFIKTILGVPKNSQISDTSNDDKIGCNSKVLASLRYGQRPITQVW 610
           MADA  ++   +++  F+++++G+ +          +K+   S  L SL    + I +V 
Sbjct: 107 MADARESA---HSDSSFVESLMGMAQLEAQDVRVEKEKVEA-SLGLESLYLDPKNIARVV 162

Query: 611 PGTVLSMCFLPSNDRRMVVAGSDNGRLGFWNVDPVDDEDRWYIYELHHGAVSGIVFE 781
           PG + S+ F PS+  +MV  G+  G +GFWNV         ++Y  H   +SGI+ +
Sbjct: 163 PGRITSLRFFPSSSVKMVAVGNKFGNVGFWNV----GGSEVHLYRPHRAPISGILIQ 215


>ref|XP_002324565.1| predicted protein [Populus trichocarpa] gi|222865999|gb|EEF03130.1|
           predicted protein [Populus trichocarpa]
          Length = 513

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 77/277 (27%), Positives = 122/277 (44%), Gaps = 44/277 (15%)
 Frame = +2

Query: 86  KYEQQRLDNIKRNAEKLAALNIHSTIDKLAASSKRQRIETIP-IQVSSEKK-----STIG 247
           +YE +RL+NI+RN E LAAL +H+    L+ ++KR R  +    +VS EKK     + I 
Sbjct: 8   EYEIKRLENIRRNDEMLAALQLHAKASLLSNATKRSRDGSAKSYKVSPEKKPKKAETPIV 67

Query: 248 VRRSLRCRGIAPAPEEIPIKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXIKEPPRDVGPI 427
           +RRSLR RG+ P    +   S                             K  P  +GP+
Sbjct: 68  IRRSLRTRGMPPDSNCLDADSNENSDKTTLNQTSISRE------------KPSPCVMGPL 115

Query: 428 KMADAFVTSALNNNNRRFIKTILGVPKNSQ--------------ISDTSND--------- 538
           KM DA   +    ++R FI T+L   +  +              + +  +D         
Sbjct: 116 KMKDAHDGTG---SDREFIDTLLSFERKPKLGVGVKEEFDCFKVVKEEGHDRVLCGPVKR 172

Query: 539 ----DKIGCNSKV----------LASLRYGQRPITQVWPGTVLSMCFLPSNDRRMVVAGS 676
               D + C  K+          L S+      I ++ PG ++++ F P ND  +V AG+
Sbjct: 173 KVENDNLNCGIKIEKREFEGCVDLGSMSLEPENIARIMPGRIMTVRFFPRNDINIVAAGN 232

Query: 677 DNGRLGFWNVDPVDDE-DRWYIYELHHGAVSGIVFEQ 784
             G + FWNVD   ++ D  ++Y  H G +SGI+F+Q
Sbjct: 233 KLGNVAFWNVDSEGEKGDGIFLYRPHTGPISGILFQQ 269


>ref|XP_003542617.1| PREDICTED: WD repeat-containing protein 76-like [Glycine max]
          Length = 455

 Score = 75.9 bits (185), Expect = 9e-12
 Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 11/242 (4%)
 Frame = +2

Query: 89  YEQQRLDNIKRNAEKLAALNIHSTIDKLAASSKRQRIE-TIPIQVSSEKKSTIGVRRSLR 265
           YE++RL+NI+RN E +A+L +HS   +L+ + KR R+E T    V  + ++ I +RRSLR
Sbjct: 9   YERKRLENIRRNDEVMASLKLHSKATQLS-NFKRPRVEQTKSHNVKPKIQTPIVIRRSLR 67

Query: 266 CRGIAPAPEEIPIKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXIKEPPRDVGPIKMADAF 445
            R I P                                      K  P   GP+ M+DA 
Sbjct: 68  TRVIPP--------------------------------HSTTPSKTEPSSSGPLSMSDAR 95

Query: 446 VTSALNNNNRRFIKTILGVPKNSQ----------ISDTSNDDKIGCNSKVLASLRYGQRP 595
             +   +++  FI++++ + K             ++D S  ++    S  L SL      
Sbjct: 96  HGT---HSHSSFIQSLMCMAKKQAQTVRDKVGRFLNDVSVKEEKMETSLRLKSLHLDPEN 152

Query: 596 ITQVWPGTVLSMCFLPSNDRRMVVAGSDNGRLGFWNVDPVDDEDRWYIYELHHGAVSGIV 775
           I +V PG +  + F PS   +M+ AG+  G +GFWNV     +   ++Y  H   +SGI+
Sbjct: 153 IARVVPGRITDVRFFPSTSVKMIAAGNRFGHIGFWNV----GQREVHLYHPHLAQISGIL 208

Query: 776 FE 781
            +
Sbjct: 209 IQ 210


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