BLASTX nr result

ID: Bupleurum21_contig00016778 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016778
         (1483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|2...   238   3e-60
ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|2...   234   4e-59
ref|XP_002532589.1| conserved hypothetical protein [Ricinus comm...   231   5e-58
ref|XP_002274015.1| PREDICTED: uncharacterized protein LOC100265...   227   7e-57
ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arab...   225   2e-56

>ref|XP_002323256.1| predicted protein [Populus trichocarpa] gi|222867886|gb|EEF05017.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  238 bits (607), Expect = 3e-60
 Identities = 137/311 (44%), Positives = 197/311 (63%), Gaps = 11/311 (3%)
 Frame = -1

Query: 1309 MSTNESIKVSAQDIQMVQNLIEQCLLRYMTRKEVMNTLSIQEKIEPAVTELVWLKLEQEN 1130
            MS+    +V  +DIQ+VQNLIE+CL  YM + EV+ TL  Q KIEP  TELVW KLE+EN
Sbjct: 1    MSSGPVRRVLPKDIQVVQNLIERCLQLYMNQTEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1129 PEFFNAYNLRLTLKEQIAEFNKLLDKQVKMMHHSEAQGVS-LKPVSGSHVSPMHHNPSSY 953
             EFF AY LRL +K+QI EFNKLL +Q  +MH   + GV+ + P +G H+SP+H N + Y
Sbjct: 61   GEFFRAYYLRLKVKQQIEEFNKLLVQQAHLMHDLNSTGVAPMPPSNGFHISPLHQNTACY 120

Query: 952  APENARHALMTDNIRQPITTNIPNEFTNHGLSA-ACMQMPFDMSNQSRKIETSPNMLLAH 776
             P++    L  +++  PI +++ N +TN G S  + M    ++S ++ +I+  PNML   
Sbjct: 121  GPDHTGPTLKPESMHHPIGSSLTNAYTNGGSSLHSSMHAAVEISARANRIDAPPNMLSMQ 180

Query: 775  NPNVGVAQGLNGGMTKRETGYSGMPQFMYGVNHNILEACSLSGDAPNLSYNGVMSNSLTA 596
            + N+G+ QG+NGGM K E GYSG   +M+G + N+LEA     DA   S++ V S+S  A
Sbjct: 181  SSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPSIADASVASFSSVDSSS-QA 239

Query: 595  PNETMMGTENTSTFGVLGNY-------DITPDYSHGPELLDNY-RGPFL-ADTECFVDSR 443
             NE+++  + TS+FG L          D+T D++   E+L+NY R PFL AD + F DSR
Sbjct: 240  LNESILDAD-TSSFGFLSQIPQVFSLSDLTADFTQSSEILENYSRSPFLAADNDNFPDSR 298

Query: 442  CRGDNQGENRR 410
             R ++ G+NRR
Sbjct: 299  ER-EHPGDNRR 308


>ref|XP_002308897.1| predicted protein [Populus trichocarpa] gi|222854873|gb|EEE92420.1|
            predicted protein [Populus trichocarpa]
          Length = 324

 Score =  234 bits (597), Expect = 4e-59
 Identities = 137/311 (44%), Positives = 195/311 (62%), Gaps = 11/311 (3%)
 Frame = -1

Query: 1309 MSTNESIKVSAQDIQMVQNLIEQCLLRYMTRKEVMNTLSIQEKIEPAVTELVWLKLEQEN 1130
            MS+    +VS +DIQ+VQNLIE+CL  YM + EV+ TL  Q KIEP  TELVW KLE+EN
Sbjct: 1    MSSGPVRRVSPKDIQVVQNLIERCLQLYMNQNEVVETLLAQAKIEPGFTELVWQKLEEEN 60

Query: 1129 PEFFNAYNLRLTLKEQIAEFNKLLDKQVKMMHHSEAQGVSLKPVS-GSHVSPMHHNPSSY 953
             EFF AY LRL +K+QI EFNKLL +Q  +M    + GV   P S GSH+  MH N + Y
Sbjct: 61   REFFRAYYLRLKVKQQIEEFNKLLVQQAHLMRDLNSTGVVSMPTSNGSHIPSMHQNTACY 120

Query: 952  APENARHALMTDNIRQPITTNIPNEFTNHGLSA-ACMQMPFDMSNQSRKIETSPNMLLAH 776
             P++   AL  +++  PI +++ N +TN G S  + M    +++ +S +I+  PNML   
Sbjct: 121  GPDHTGPALKPESMHHPIGSSLTNAYTNGGSSLHSSMHAAVEIAARSSRIDAPPNMLSMQ 180

Query: 775  NPNVGVAQGLNGGMTKRETGYSGMPQFMYGVNHNILEACSLSGDAPNLSYNGVMSNSLTA 596
            + N+G+ QG+NGGM K E GYSG   +M+G + N+LEA     DA   S++ V S+S  A
Sbjct: 181  SSNIGLLQGMNGGMIKSEAGYSGTSPYMFGADGNVLEARPSIADASVASFSSVESSS-QA 239

Query: 595  PNETMMGTENTSTFGVLGNY-------DITPDYSHGPELLDNY-RGPFL-ADTECFVDSR 443
             NE+++  + TS+FG L          D+T D++   E+L+NY R P+L AD + F DS+
Sbjct: 240  LNESILDAD-TSSFGFLSQIPRNFSLSDLTADFTQSSEILENYPRSPYLAADNDNFPDSQ 298

Query: 442  CRGDNQGENRR 410
             R ++ G+NRR
Sbjct: 299  ER-EHPGDNRR 308


>ref|XP_002532589.1| conserved hypothetical protein [Ricinus communis]
            gi|223527677|gb|EEF29786.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 315

 Score =  231 bits (588), Expect = 5e-58
 Identities = 133/294 (45%), Positives = 186/294 (63%), Gaps = 10/294 (3%)
 Frame = -1

Query: 1261 VQNLIEQCLLRYMTRKEVMNTLSIQEKIEPAVTELVWLKLEQENPEFFNAYNLRLTLKEQ 1082
            VQNLIE+CL  YM +KEV+ TL  Q KIEP  TELVW KLE+EN EFF AY LRLT+K Q
Sbjct: 10   VQNLIERCLQLYMNQKEVVETLLAQAKIEPGFTELVWQKLEEENREFFKAYYLRLTVKHQ 69

Query: 1081 IAEFNKLLDKQVKMMHHSEAQGVSLKPVSGSHVSPMHHNPSSYAPENARHALMTDNIRQP 902
            I EFNKLL++QV++M        S+   +G+H+ PMH N + YA +++  AL  +N+   
Sbjct: 70   IIEFNKLLEQQVRLMRQIN-PAASMPTSNGTHIPPMHQNSACYASDHSGSALKPENMHHL 128

Query: 901  ITTNIPNEFTNHGLSA-ACMQMPFDMSNQSRKIETSPNMLLAHNPNVGVAQGLNGGMTKR 725
              +++ N FTN G S  + M    +MS    +I+  PNML   + N+G+ QGLNGGM K 
Sbjct: 129  FGSSMTNAFTNVGSSLHSSMHTAVEMSAHVNRIDAPPNMLSTQSSNIGLMQGLNGGMIKS 188

Query: 724  ETGYSGMPQFMYGVNHNILEACSLSGDAPNLSYNGVMSNSLTAPNETMMGTENTSTFGVL 545
            E GYSG   +M+G + N+LEA    GDA   S++ V SNS  A NE ++  + TS++G L
Sbjct: 189  EAGYSGTNPYMFGADGNVLEARPSLGDASVASFSSVESNS-QALNEPLLDAD-TSSYGFL 246

Query: 544  GNY-------DITPDYSHGPELLDNY-RGPFLA-DTECFVDSRCRGDNQGENRR 410
             +        D+T D++   ++L+NY R PFLA D + F+DSR   ++QG+N+R
Sbjct: 247  NHIPQTFSLSDLTADFAQSSDILENYPRSPFLASDNDNFLDSR-EQEHQGDNKR 299


>ref|XP_002274015.1| PREDICTED: uncharacterized protein LOC100265940 [Vitis vinifera]
            gi|297739923|emb|CBI30105.3| unnamed protein product
            [Vitis vinifera]
          Length = 325

 Score =  227 bits (578), Expect = 7e-57
 Identities = 133/311 (42%), Positives = 192/311 (61%), Gaps = 11/311 (3%)
 Frame = -1

Query: 1309 MSTNESIKVSAQDIQMVQNLIEQCLLRYMTRKEVMNTLSIQEKIEPAVTELVWLKLEQEN 1130
            MS+  + +VS QDIQ+VQNLIE+CL  YM +KEV+ TL  Q KIEP  TELVW KL +EN
Sbjct: 1    MSSGAARRVSRQDIQLVQNLIERCLQLYMNQKEVVETLLDQAKIEPDFTELVWQKLVEEN 60

Query: 1129 PEFFNAYNLRLTLKEQIAEFNKLLDKQVKMMHHSEAQGVSLKPV-SGSHVSPMHHNPSSY 953
             +FF AY+LRL +K QI  FN+LL +QV +MH      V   P+ +GS +S +  N + Y
Sbjct: 61   QDFFEAYHLRLMVKHQINVFNELLKQQVDLMHRICPARVDTVPIPNGSQLSALQQNSACY 120

Query: 952  APENARHALMTDNIRQPITTNIPNEFTNHGLS-AACMQMPFDMSNQSRKIETSPNMLLAH 776
              E+   ++   ++ + I++ + N FTN G S    M    DMS  + +I+   +ML   
Sbjct: 121  PSEHVGPSMKPSSMHRHISSGLSNAFTNGGSSLQTSMHTAVDMSANTCRIDAPQDMLSTR 180

Query: 775  NPNVGVAQGLNGGMTKRETGYSGMPQFMYGVNHNILEACSLSGDAPNLSYNGVMSNSLTA 596
            +PN+G+ QG+NGGM K E GYSG   FM+G ++  LE     GDA    ++ V+SNS T 
Sbjct: 181  SPNLGLMQGMNGGMIKPEAGYSGSSPFMFGADNTALEKRVAIGDASVTPFSSVVSNSQTL 240

Query: 595  PNETMMGTENTSTFGVLGNY-------DITPDYSHGPELLDNY-RGPFL-ADTECFVDSR 443
              E ++ ++ TST+G LG         D+T  +S   ++L++Y R PFL  DT+ F+DSR
Sbjct: 241  -GEPLLDSD-TSTYGFLGQIPQSFSLSDLTAGFSQSSDILESYPRSPFLTTDTDNFMDSR 298

Query: 442  CRGDNQGENRR 410
             RG+NQG+++R
Sbjct: 299  GRGENQGDSKR 309


>ref|XP_002884785.1| hypothetical protein ARALYDRAFT_478351 [Arabidopsis lyrata subsp.
            lyrata] gi|297330625|gb|EFH61044.1| hypothetical protein
            ARALYDRAFT_478351 [Arabidopsis lyrata subsp. lyrata]
          Length = 321

 Score =  225 bits (574), Expect = 2e-56
 Identities = 136/312 (43%), Positives = 190/312 (60%), Gaps = 12/312 (3%)
 Frame = -1

Query: 1309 MSTNESIKVSAQDIQMVQNLIEQCLLRYMTRKEVMNTLSIQEKIEPAVTELVWLKLEQEN 1130
            MS+    +VS QDIQ+VQNLIE+CL  YM +KEV++TL  Q KIEP  TELVW KLE+EN
Sbjct: 1    MSSGSVRRVSRQDIQLVQNLIERCLQLYMNQKEVVDTLLEQAKIEPGFTELVWQKLEEEN 60

Query: 1129 PEFFNAYNLRLTLKEQIAEFNKLLDKQVKMMHHSEAQGV-SLKPVSGSHVSPMHHNPSSY 953
             EFF AY LRL +K QI EFNKLL++QV  M      GV S++  +GSH+  M+     Y
Sbjct: 61   REFFKAYYLRLMVKHQIMEFNKLLEQQVHHMRQMHPTGVASVQNTNGSHIQSMNQKQLCY 120

Query: 952  APENARHALMTDNIRQPITTNIPNEFTNHGLSAACMQMP--FDMSNQSRKIETSPNMLLA 779
              E+   +L +++   P+ +++ N F N G S     +P   ++S  +R+++ SPNML +
Sbjct: 121  PSEHTDQSLKSESAHHPMASSLSNAFLN-GSSTLNTNVPSSINISTHARRVDASPNMLSS 179

Query: 778  HNPNVGVAQGLNGGMTKRETGYSGMPQFMYGVNHNILEACSLSGDAPNLSYNGVMSNSLT 599
            H P V   QG+NGGM K ET ++    FMYG   N LE  S  GD    +++   +N   
Sbjct: 180  HMPMV---QGMNGGMIKSETAFTNPASFMYGGERNALEGHSAVGDTSISNFSNESNNQ-- 234

Query: 598  APNETMMGTENTSTFGVLGNY-------DITPDYSHGPELLDNY-RGPFL-ADTECFVDS 446
              ++T++  E TST G LG         D+T D+S   E+L++Y R PFL A+ E F+DS
Sbjct: 235  PLSDTLLEAE-TSTIGFLGQIPRNFSLSDLTADFSQSSEILESYDRSPFLVANAENFLDS 293

Query: 445  RCRGDNQGENRR 410
            R RG+ QG+N+R
Sbjct: 294  RERGEYQGDNKR 305


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