BLASTX nr result

ID: Bupleurum21_contig00016769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016769
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABX26124.1| bypass1 [Nicotiana benthamiana]                        173   1e-41
ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like ...   169   2e-40
gb|ABB16971.1| unknown [Solanum tuberosum]                            166   2e-39
ref|NP_566063.1| uncharacterized protein [Arabidopsis thaliana] ...   166   2e-39
ref|XP_002882050.1| hypothetical protein ARALYDRAFT_904061 [Arab...   165   3e-39

>gb|ABX26124.1| bypass1 [Nicotiana benthamiana]
          Length = 352

 Score =  173 bits (438), Expect = 1e-41
 Identities = 80/142 (56%), Positives = 110/142 (77%), Gaps = 1/142 (0%)
 Frame = -3

Query: 426 ARSSLDGWKQHISSNNSRVENCLTILDTLYATLDEPKVKNSSKGKVLMRALYGVKVVTLF 247
           ARSSLDGWK HI+S N R+ENC  ILD+L  +L+ PK+KNS+KGKVLM A+YGV+VVT+F
Sbjct: 145 ARSSLDGWKHHINSKNHRLENCFAILDSLSESLNLPKIKNSAKGKVLMHAMYGVRVVTVF 204

Query: 246 VCRILAVAFSGSV-KLMDVQISEKYLWAETYTTLQSFLNGELRNLYTSGSATVMKELQTV 70
           +C I AVAFSGS  KL D+Q+ E  LWAE +  L+ F++GE+R++Y+ G  T +KEL+ V
Sbjct: 205 ICSIFAVAFSGSAKKLKDIQVHETCLWAEAFVDLRDFISGEIRSIYSGGKFTALKELEAV 264

Query: 69  DKVVKKLYPLVDDGPNSVETEE 4
           D  VKKL+P++ DG + ++ E+
Sbjct: 265 DASVKKLFPVIQDGIDPIDAEQ 286


>ref|XP_003633960.1| PREDICTED: protein BPS1, chloroplastic-like [Vitis vinifera]
          Length = 350

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/143 (54%), Positives = 110/143 (76%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 ARSSLDGWKQHISSNNSRVENCLTILDTLYATLDEPKVKNSSKGKVLMRALYGVKVVTLF 247
           ARSSLD W+QHI S N +++NCLTILD+L  +++ PK+KNS+KGKVLMRA+YGV+V T+F
Sbjct: 146 ARSSLDSWRQHIGSKNPKLQNCLTILDSLAESINLPKIKNSAKGKVLMRAMYGVRVGTVF 205

Query: 246 VCRILAVAFSGSV-KLMDVQISEKYLWAETYTTLQSFLNGELRNLYTSGSATVMKELQTV 70
           VC + A AF+GS  KL+D+ +++ +LW+E +T LQS++N E+RN ++SG  TV+KEL+ V
Sbjct: 206 VCSVFAAAFTGSANKLIDLHVADTFLWSEAFTDLQSYVNVEIRNTFSSGRVTVLKELEAV 265

Query: 69  DKVVKKLYPLVDDGPNSVETEEF 1
           D  + KLYP+V DG    E   F
Sbjct: 266 DTSINKLYPMVQDGVGPAEDGTF 288


>gb|ABB16971.1| unknown [Solanum tuberosum]
          Length = 352

 Score =  166 bits (419), Expect = 2e-39
 Identities = 80/142 (56%), Positives = 106/142 (74%), Gaps = 1/142 (0%)
 Frame = -3

Query: 426 ARSSLDGWKQHISSNNSRVENCLTILDTLYATLDEPKVKNSSKGKVLMRALYGVKVVTLF 247
           ARSS DGWKQHI+S N R+ENC  ILD+L  +L+ PK+KNS+KGKVLMRA+YGV+VVT+F
Sbjct: 145 ARSSFDGWKQHINSKNPRLENCFAILDSLTESLNLPKIKNSAKGKVLMRAMYGVRVVTVF 204

Query: 246 VCRILAVAFSGSVK-LMDVQISEKYLWAETYTTLQSFLNGELRNLYTSGSATVMKELQTV 70
           +  + AV FSGS K L D+QI E  LW E +  ++ F++ E+R +Y+SG  T +KEL+ V
Sbjct: 205 ILSMFAVTFSGSTKELKDLQIHETCLWTEAFVDVRDFISQEIRRIYSSGRITALKELEVV 264

Query: 69  DKVVKKLYPLVDDGPNSVETEE 4
           D  VKKLYPL+ DG +  E E+
Sbjct: 265 DTSVKKLYPLIQDGVDPNEAEQ 286


>ref|NP_566063.1| uncharacterized protein [Arabidopsis thaliana]
           gi|3702339|gb|AAC62896.1| expressed protein [Arabidopsis
           thaliana] gi|18252159|gb|AAL61912.1| unknown protein
           [Arabidopsis thaliana] gi|21386927|gb|AAM47867.1|
           unknown protein [Arabidopsis thaliana]
           gi|330255547|gb|AEC10641.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 347

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/143 (53%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 ARSSLDGWKQHISSNNSRVENCLTILDTLYATLDEPKVKNSSKGKVLMRALYGVKVVTLF 247
           ARSSLD W+QH+++NN R+ENC  +LD+L  +L  PKVKNS KGKVLMRA YGVKV T++
Sbjct: 146 ARSSLDSWRQHVNTNNPRIENCRAVLDSLVKSLSLPKVKNSPKGKVLMRAFYGVKVQTVY 205

Query: 246 VCRILAVAFSGSVK-LMDVQISEKYLWAETYTTLQSFLNGELRNLYTSGSATVMKELQTV 70
           +C +   A+S S K L D+ +SEK LWA+ +T +QS +N E+R++ +SG  T++KEL++V
Sbjct: 206 ICSVFTAAWSDSTKDLFDLPVSEKPLWAKVFTDMQSVVNAEIRDMLSSGRTTILKELESV 265

Query: 69  DKVVKKLYPLVDDGPNSVETEEF 1
           D  V+KLYP++ DG + VE E F
Sbjct: 266 DASVEKLYPMIQDGVDPVEVEFF 288


>ref|XP_002882050.1| hypothetical protein ARALYDRAFT_904061 [Arabidopsis lyrata subsp.
           lyrata] gi|297327889|gb|EFH58309.1| hypothetical protein
           ARALYDRAFT_904061 [Arabidopsis lyrata subsp. lyrata]
          Length = 347

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/143 (53%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
 Frame = -3

Query: 426 ARSSLDGWKQHISSNNSRVENCLTILDTLYATLDEPKVKNSSKGKVLMRALYGVKVVTLF 247
           ARSSLD W+QH+++NN R+ENC  +LD+L  +L  PKVKNS KGKVLMRA YGVKV T++
Sbjct: 146 ARSSLDSWRQHVNANNPRIENCRAVLDSLVKSLSLPKVKNSPKGKVLMRAFYGVKVQTVY 205

Query: 246 VCRILAVAFSGSVK-LMDVQISEKYLWAETYTTLQSFLNGELRNLYTSGSATVMKELQTV 70
           +C +   A+S S K L D+ +SEK LWA+ +T +QS +N E+R++ +SG  T++KEL++V
Sbjct: 206 ICSVFTAAWSDSTKDLFDLPVSEKPLWAKVFTDMQSVVNAEIRHMLSSGRTTILKELESV 265

Query: 69  DKVVKKLYPLVDDGPNSVETEEF 1
           D  V+KLYP++ DG + VE E F
Sbjct: 266 DASVEKLYPMIQDGVDPVEVECF 288


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