BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016738
         (1671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containi...   661   0.0  
ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containi...   659   0.0  
ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
ref|XP_002532046.1| pentatricopeptide repeat-containing protein,...   639   0.0  
ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containi...   634   e-179

>ref|XP_004143565.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Cucumis sativus]
          Length = 528

 Score =  661 bits (1705), Expect = 0.0
 Identities = 331/451 (73%), Positives = 385/451 (85%), Gaps = 7/451 (1%)
 Frame = -1

Query: 1671 ITCFSMTRPGRKMGSKSDPLSDSADLVRTLMRKFNDKKPLTTTLEMYVKVVRTEHCFLLF 1492
            + C S TRP RK G K+D  S++ +LVR ++R F+DK+PL  TL+ YV+V+RTEHCFLLF
Sbjct: 41   VVCIS-TRPSRKFGVKTDR-SEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLF 98

Query: 1491 EELGKNDKWLQCLEVFRWMQRQRWYIADNGVYSKLISIMGKKGQTRMAMWLFSEMRNSGC 1312
            EELGK DKWL+CLEVFRWMQ+QRWYIADNGVYSKLISIMGKKGQ RMAMWLFSEMRNSGC
Sbjct: 99   EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158

Query: 1311 RPDTSVYNSLITAHLHSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRAAAQARKV 1132
            RPDTSVYN+LITAHLHS+DK+KAL K L YF+KMKGMERCKPNIVTYNIL RA AQA KV
Sbjct: 159  RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218

Query: 1131 DQVDLLFKDLDDSIIAPDIFTYNGMMDAYGKNGMIREMELLLSRMKSNKLKPDIITFNLL 952
            DQV+ LFKDLD+S+++ DI+TYNG+MDAYGKNG I+EMEL+L+RMKSN++KPDII+FNLL
Sbjct: 219  DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLL 278

Query: 951  IDSYGRKQEFEKMEQVFKSLLGSKERPTLPTFNSMITNYGRARLREKAELVYQKMNDMGY 772
            IDSYG+KQ F+KMEQVFKSLL SKERPTLPTFNSMITNYG+ARLREKAE V++KM DMGY
Sbjct: 279  IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 338

Query: 771  RPSYITKECLILMYGCCDCTSKAREIYDWMVESDKEVKVSTLNAMLEVYCRNNLPTEADS 592
             PSY+T E LI+MYG CDC SKAREI+D MV S KEV+VSTLNAML+VYC N LP EAD 
Sbjct: 339  DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 398

Query: 591  LFESARSSKVCNINSSTYKLLYKAYTKADTKELLEKLLKHMDKDGIIPNKRFFLDALGAF 412
            LFESA + +V   +S+TYKLLYKAYTKAD KELLEKLLK+MDK GIIPNKRFFLDALG  
Sbjct: 399  LFESAGNMRVFP-DSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTI 457

Query: 411  GSS-------KTKSSKENMIPATERKSQQKS 340
            GSS       +T++   N   + E++S  ++
Sbjct: 458  GSSQEKPEPARTRTGSRNSDSSVEKQSSSRT 488


>ref|XP_004169853.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Cucumis sativus]
          Length = 494

 Score =  659 bits (1699), Expect = 0.0
 Identities = 327/432 (75%), Positives = 377/432 (87%)
 Frame = -1

Query: 1671 ITCFSMTRPGRKMGSKSDPLSDSADLVRTLMRKFNDKKPLTTTLEMYVKVVRTEHCFLLF 1492
            + C S TRP RK G K+D  S++ +LVR ++R F+DK+PL  TL+ YV+V+RTEHCFLLF
Sbjct: 41   VVCIS-TRPSRKFGVKTDR-SEAEELVRGIIRNFSDKEPLLKTLDKYVRVMRTEHCFLLF 98

Query: 1491 EELGKNDKWLQCLEVFRWMQRQRWYIADNGVYSKLISIMGKKGQTRMAMWLFSEMRNSGC 1312
            EELGK DKWL+CLEVFRWMQ+QRWYIADNGVYSKLISIMGKKGQ RMAMWLFSEMRNSGC
Sbjct: 99   EELGKRDKWLECLEVFRWMQKQRWYIADNGVYSKLISIMGKKGQIRMAMWLFSEMRNSGC 158

Query: 1311 RPDTSVYNSLITAHLHSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRAAAQARKV 1132
            RPDTSVYN+LITAHLHS+DK+KAL K L YF+KMKGMERCKPNIVTYNIL RA AQA KV
Sbjct: 159  RPDTSVYNALITAHLHSKDKAKALVKVLSYFEKMKGMERCKPNIVTYNILTRAFAQAAKV 218

Query: 1131 DQVDLLFKDLDDSIIAPDIFTYNGMMDAYGKNGMIREMELLLSRMKSNKLKPDIITFNLL 952
            DQV+ LFKDLD+S+++ DI+TYNG+MDAYGKNG I+EMEL+L+RMKSN++KPDII+FNLL
Sbjct: 219  DQVNTLFKDLDESVVSADIYTYNGVMDAYGKNGNIKEMELMLARMKSNQIKPDIISFNLL 278

Query: 951  IDSYGRKQEFEKMEQVFKSLLGSKERPTLPTFNSMITNYGRARLREKAELVYQKMNDMGY 772
            IDSYG+KQ F+KMEQVFKSLL SKERPTLPTFNSMITNYG+ARLREKAE V++KM DMGY
Sbjct: 279  IDSYGKKQLFDKMEQVFKSLLRSKERPTLPTFNSMITNYGKARLREKAEEVFRKMKDMGY 338

Query: 771  RPSYITKECLILMYGCCDCTSKAREIYDWMVESDKEVKVSTLNAMLEVYCRNNLPTEADS 592
             PSY+T E LI+MYG CDC SKAREI+D MV S KEV+VSTLNAML+VYC N LP EAD 
Sbjct: 339  DPSYVTCESLIMMYGHCDCVSKAREIFDGMVNSGKEVRVSTLNAMLDVYCINGLPLEADL 398

Query: 591  LFESARSSKVCNINSSTYKLLYKAYTKADTKELLEKLLKHMDKDGIIPNKRFFLDALGAF 412
            LFESA + +V   +S+TYKLLYKAYTKAD KELLEKLLK+MDK GIIPNKRFFLDALG  
Sbjct: 399  LFESAGNMRVFP-DSTTYKLLYKAYTKADKKELLEKLLKNMDKAGIIPNKRFFLDALGTI 457

Query: 411  GSSKTKSSKENM 376
            GSS+   + + +
Sbjct: 458  GSSQENQNLQEL 469


>ref|XP_002276540.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic [Vitis vinifera]
            gi|296082481|emb|CBI21486.3| unnamed protein product
            [Vitis vinifera]
          Length = 489

 Score =  657 bits (1694), Expect = 0.0
 Identities = 327/423 (77%), Positives = 371/423 (87%)
 Frame = -1

Query: 1671 ITCFSMTRPGRKMGSKSDPLSDSADLVRTLMRKFNDKKPLTTTLEMYVKVVRTEHCFLLF 1492
            ++C S TRP RK G K D  S+  +LVR LM+ F  ++PL +TL  YVKV+RTEHCF LF
Sbjct: 48   VSCVS-TRPRRKPGPKPDK-SEVEELVRVLMKNFGGERPLISTLNKYVKVIRTEHCFRLF 105

Query: 1491 EELGKNDKWLQCLEVFRWMQRQRWYIADNGVYSKLISIMGKKGQTRMAMWLFSEMRNSGC 1312
            EELGK DKWLQCLEVFRWMQ+QRWYIADNGVYSKLIS+MGKKGQTRMAMWLFSEMRNSGC
Sbjct: 106  EELGKTDKWLQCLEVFRWMQKQRWYIADNGVYSKLISVMGKKGQTRMAMWLFSEMRNSGC 165

Query: 1311 RPDTSVYNSLITAHLHSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRAAAQARKV 1132
            RPDTSVYN+LITAHLHSRDKSKAL KALGYFDKMKGMERCKPNIVTYNILLRA AQA+ V
Sbjct: 166  RPDTSVYNALITAHLHSRDKSKALIKALGYFDKMKGMERCKPNIVTYNILLRAFAQAQNV 225

Query: 1131 DQVDLLFKDLDDSIIAPDIFTYNGMMDAYGKNGMIREMELLLSRMKSNKLKPDIITFNLL 952
            +Q + LFK+L++SI++PDIFT+NG+MDAYGKNGMI+EME +LSRMKSN+ KPDIITFN+L
Sbjct: 226  NQANALFKELNESIVSPDIFTFNGVMDAYGKNGMIKEMESVLSRMKSNQCKPDIITFNVL 285

Query: 951  IDSYGRKQEFEKMEQVFKSLLGSKERPTLPTFNSMITNYGRARLREKAELVYQKMNDMGY 772
            IDSYGR+QEF+KMEQVFKSLL SKE+PTLPTFNSMITNYG+ARL+EKAE V++KM DMGY
Sbjct: 286  IDSYGRRQEFDKMEQVFKSLLRSKEKPTLPTFNSMITNYGKARLKEKAENVFKKMTDMGY 345

Query: 771  RPSYITKECLILMYGCCDCTSKAREIYDWMVESDKEVKVSTLNAMLEVYCRNNLPTEADS 592
             P++IT E LI+MYG CDC S+AREI+D M+ S KE+KVSTLNAMLEVYC N LP EAD 
Sbjct: 346  APNFITYESLIMMYGFCDCISRAREIFDEMMASKKEMKVSTLNAMLEVYCMNGLPMEADL 405

Query: 591  LFESARSSKVCNINSSTYKLLYKAYTKADTKELLEKLLKHMDKDGIIPNKRFFLDALGAF 412
            L E AR ++     SSTYKLLYKAYTKAD KELLEKLLK MD DGI+PNKRFFL+ALGAF
Sbjct: 406  LLERARKNRPFP-GSSTYKLLYKAYTKADQKELLEKLLKLMDSDGILPNKRFFLEALGAF 464

Query: 411  GSS 403
            GSS
Sbjct: 465  GSS 467


>ref|XP_002532046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528289|gb|EEF30336.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 478

 Score =  639 bits (1647), Expect = 0.0
 Identities = 321/431 (74%), Positives = 373/431 (86%), Gaps = 1/431 (0%)
 Frame = -1

Query: 1671 ITCFSMTRPGRKMGSKSDPLSDSADLVRTLMRKFN-DKKPLTTTLEMYVKVVRTEHCFLL 1495
            ITC S TRP +K    S+  S++ DLVR ++R F+ DK PL  TL+ YV+VVRTEHCFLL
Sbjct: 45   ITCVS-TRPRKKRFPISEE-SETEDLVRYVLRSFSSDKVPLVRTLDKYVRVVRTEHCFLL 102

Query: 1494 FEELGKNDKWLQCLEVFRWMQRQRWYIADNGVYSKLISIMGKKGQTRMAMWLFSEMRNSG 1315
            FEELG+ DKWLQCLEVFRWMQ+QRWYIAD+GVYSKLIS+MGKKGQTRMAMWLFSEMRNSG
Sbjct: 103  FEELGRRDKWLQCLEVFRWMQKQRWYIADSGVYSKLISVMGKKGQTRMAMWLFSEMRNSG 162

Query: 1314 CRPDTSVYNSLITAHLHSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRAAAQARK 1135
            CRPD+SVYN+LITAHLHS+DK+KAL KALGYF+KMKGM+RC+PN+VTYNILLRA AQAR 
Sbjct: 163  CRPDSSVYNALITAHLHSKDKAKALIKALGYFEKMKGMQRCQPNVVTYNILLRAFAQARN 222

Query: 1134 VDQVDLLFKDLDDSIIAPDIFTYNGMMDAYGKNGMIREMELLLSRMKSNKLKPDIITFNL 955
            V+QV+ LFKDLD SI++PDI+TYNG+MDAYGKNGMIREME +LSRMKSN+ KPDIITFNL
Sbjct: 223  VNQVNALFKDLDQSIVSPDIYTYNGVMDAYGKNGMIREMESVLSRMKSNQCKPDIITFNL 282

Query: 954  LIDSYGRKQEFEKMEQVFKSLLGSKERPTLPTFNSMITNYGRARLREKAELVYQKMNDMG 775
            LIDSYG+KQ+F+KMEQVFKSLL SKERPTLPTFNSMITNYG+AR +E AE V QKM  M 
Sbjct: 283  LIDSYGKKQDFDKMEQVFKSLLHSKERPTLPTFNSMITNYGKARQKENAESVLQKMTKMK 342

Query: 774  YRPSYITKECLILMYGCCDCTSKAREIYDWMVESDKEVKVSTLNAMLEVYCRNNLPTEAD 595
            Y P++IT E LI+MYG CD  SKAREI+D M+ES KEVKVSTLNAML+VYC N LP EAD
Sbjct: 343  YTPNFITYESLIMMYGFCDSVSKAREIFDDMIESGKEVKVSTLNAMLDVYCLNGLPMEAD 402

Query: 594  SLFESARSSKVCNINSSTYKLLYKAYTKADTKELLEKLLKHMDKDGIIPNKRFFLDALGA 415
             LF++AR+  +   +S+TYKLLYKAYTKA+ K+L++KLLKHMD+DGIIPNKRFFLDALGA
Sbjct: 403  LLFDNARNVGLLP-DSTTYKLLYKAYTKANMKKLVQKLLKHMDRDGIIPNKRFFLDALGA 461

Query: 414  FGSSKTKSSKE 382
            F S    S  +
Sbjct: 462  FKSLPASSGNQ 472


>ref|XP_003524280.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
            chloroplastic-like [Glycine max]
          Length = 503

 Score =  634 bits (1634), Expect = e-179
 Identities = 318/442 (71%), Positives = 370/442 (83%), Gaps = 1/442 (0%)
 Frame = -1

Query: 1650 RPGRKMGSKSDPLSDSADLVRTLMRKF-NDKKPLTTTLEMYVKVVRTEHCFLLFEELGKN 1474
            RP RK   KS+  S++ +LVR L  K  NDK+PL  TL  YVK VRT+HCFLLFEEL K+
Sbjct: 30   RPKRK---KSNHNSEAQELVRLLTSKISNDKEPLLKTLNKYVKQVRTQHCFLLFEELAKH 86

Query: 1473 DKWLQCLEVFRWMQRQRWYIADNGVYSKLISIMGKKGQTRMAMWLFSEMRNSGCRPDTSV 1294
            D WLQCLEVFRWMQ+QRWYIADNG+YSKLIS+MGKKGQTRMAMWLFSEMRN+GCRPDTSV
Sbjct: 87   DNWLQCLEVFRWMQKQRWYIADNGIYSKLISVMGKKGQTRMAMWLFSEMRNTGCRPDTSV 146

Query: 1293 YNSLITAHLHSRDKSKALDKALGYFDKMKGMERCKPNIVTYNILLRAAAQARKVDQVDLL 1114
            YN+LITAHLHSRDK+KAL KA+GYF KMKGMERCKPNIVTYNILLRA AQAR V+QV+ L
Sbjct: 147  YNALITAHLHSRDKTKALAKAIGYFQKMKGMERCKPNIVTYNILLRAFAQARNVEQVNSL 206

Query: 1113 FKDLDDSIIAPDIFTYNGMMDAYGKNGMIREMELLLSRMKSNKLKPDIITFNLLIDSYGR 934
            FKDLD+SI++PDI+T+NG+MDAYGKNGMIREME +L+RMKSN+ KPD+ITFNLLIDSYG+
Sbjct: 207  FKDLDESIVSPDIYTFNGVMDAYGKNGMIREMEAVLARMKSNQCKPDLITFNLLIDSYGK 266

Query: 933  KQEFEKMEQVFKSLLGSKERPTLPTFNSMITNYGRARLREKAELVYQKMNDMGYRPSYIT 754
            KQEF KMEQVFKSLL SKER +LPTFNSMI NYG+ARL++KAE V+++M DMGY PS++T
Sbjct: 267  KQEFGKMEQVFKSLLRSKERASLPTFNSMILNYGKARLKDKAEDVFKRMTDMGYTPSFVT 326

Query: 753  KECLILMYGCCDCTSKAREIYDWMVESDKEVKVSTLNAMLEVYCRNNLPTEADSLFESAR 574
             E LI MYG CDC S+A +++D +VES   +KVSTLNAML+VYC N LP EADSLFE A 
Sbjct: 327  HESLIYMYGFCDCVSRAAQLFDELVESKAHIKVSTLNAMLDVYCINGLPQEADSLFERAN 386

Query: 573  SSKVCNINSSTYKLLYKAYTKADTKELLEKLLKHMDKDGIIPNKRFFLDALGAFGSSKTK 394
            S K+   +SST+KLLYKAYTKA+ KELL+KLLKHMDKDGI+PNKRFFLDALGA  S    
Sbjct: 387  SIKIYP-DSSTFKLLYKAYTKANQKELLDKLLKHMDKDGIVPNKRFFLDALGAVASLPAN 445

Query: 393  SSKENMIPATERKSQQKSATLA 328
            S   N   AT+ K+    +  A
Sbjct: 446  SESAN--AATDSKTANSESANA 465