BLASTX nr result

ID: Bupleurum21_contig00016723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00016723
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2...   149   2e-34
gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]          143   1e-32
ref|XP_003628784.1| ABC transporter B family member [Medicago tr...   143   2e-32
ref|XP_003612850.1| ABC transporter B family member [Medicago tr...   142   3e-32
ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, AB...   141   6e-32

>ref|XP_002277547.1| PREDICTED: ABC transporter B family member 2 [Vitis vinifera]
           gi|297742073|emb|CBI33860.3| unnamed protein product
           [Vitis vinifera]
          Length = 1243

 Score =  149 bits (376), Expect = 2e-34
 Identities = 72/84 (85%), Positives = 77/84 (91%)
 Frame = -3

Query: 254 KRSESVPLIKLFAFADCYDYFLMFIGSVGACIHGASVPVFFIFFGKLIDVIGLAYLFPAQ 75
           K+   VPL+KLFAFAD YD FLM +GSVGACIHGASVPVFFIFFGKLID+IGLAYLFPA 
Sbjct: 18  KKPRRVPLLKLFAFADLYDCFLMAVGSVGACIHGASVPVFFIFFGKLIDIIGLAYLFPAA 77

Query: 74  ASHKVAKYSLDFVYLSVVILFSSW 3
           ASHKVAKYSLDFVYLS+VILFSSW
Sbjct: 78  ASHKVAKYSLDFVYLSLVILFSSW 101


>gb|AAF23176.1|AF216497_1 P-glycoprotein [Gossypium hirsutum]
          Length = 1249

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/90 (74%), Positives = 78/90 (86%)
 Frame = -3

Query: 272 DEEVTKKRSESVPLIKLFAFADCYDYFLMFIGSVGACIHGASVPVFFIFFGKLIDVIGLA 93
           D    KK+   VPL+KLF+FAD YD+ LM +GS+GAC+HGASVPVFFIFFGKLI++IG+A
Sbjct: 17  DATKKKKKQRKVPLLKLFSFADFYDHVLMGLGSLGACVHGASVPVFFIFFGKLINIIGMA 76

Query: 92  YLFPAQASHKVAKYSLDFVYLSVVILFSSW 3
           YLFP +ASHKVAKYSLDFVYLSV ILFSSW
Sbjct: 77  YLFPKEASHKVAKYSLDFVYLSVAILFSSW 106


>ref|XP_003628784.1| ABC transporter B family member [Medicago truncatula]
           gi|355522806|gb|AET03260.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 488

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/83 (78%), Positives = 77/83 (92%)
 Frame = -3

Query: 251 RSESVPLIKLFAFADCYDYFLMFIGSVGACIHGASVPVFFIFFGKLIDVIGLAYLFPAQA 72
           R + VPL+KLF+FAD YDY LM +GSVGACIHGASVPVFFIFFGK+I+V+GLAYLFP +A
Sbjct: 7   RGKKVPLLKLFSFADFYDYVLMAVGSVGACIHGASVPVFFIFFGKIINVVGLAYLFPKEA 66

Query: 71  SHKVAKYSLDFVYLSVVILFSSW 3
           SH+VAKY+LDFVYLS++ILFSSW
Sbjct: 67  SHQVAKYALDFVYLSIIILFSSW 89


>ref|XP_003612850.1| ABC transporter B family member [Medicago truncatula]
           gi|355514185|gb|AES95808.1| ABC transporter B family
           member [Medicago truncatula]
          Length = 1234

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/85 (77%), Positives = 76/85 (89%)
 Frame = -3

Query: 257 KKRSESVPLIKLFAFADCYDYFLMFIGSVGACIHGASVPVFFIFFGKLIDVIGLAYLFPA 78
           +K+   V ++KLF+FAD YDY LMFIGS+GA +HGASVP+FFIFFGKLI+VIGLAYLFP 
Sbjct: 9   RKKEHKVSMLKLFSFADSYDYVLMFIGSIGAIVHGASVPIFFIFFGKLINVIGLAYLFPK 68

Query: 77  QASHKVAKYSLDFVYLSVVILFSSW 3
           +ASHKVAKYSLDFVYLSV ILFSSW
Sbjct: 69  EASHKVAKYSLDFVYLSVAILFSSW 93


>ref|XP_002304346.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222841778|gb|EEE79325.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1250

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/85 (77%), Positives = 75/85 (88%)
 Frame = -3

Query: 257 KKRSESVPLIKLFAFADCYDYFLMFIGSVGACIHGASVPVFFIFFGKLIDVIGLAYLFPA 78
           KK+   VP  KLFAFAD YDY LM +GS+GAC+HGASVPVFFIFFGKLI++IGLAYLFP 
Sbjct: 21  KKKQRKVPFWKLFAFADFYDYVLMGLGSLGACVHGASVPVFFIFFGKLINIIGLAYLFPK 80

Query: 77  QASHKVAKYSLDFVYLSVVILFSSW 3
           +ASH+V KYSLDFVYLSVVILF+SW
Sbjct: 81  EASHRVGKYSLDFVYLSVVILFASW 105


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